RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 LRRC55Q6ZSA7 311 aa5.45□□□□□ -1.54
CDC42BPA-212ENST00000478573 PASD1Q8IV76 773 aa5.45□□□□□ -1.54
CDC42BPA-212ENST00000478573 EFHBQ8N7U6 833 aa5.45□□□□□ -1.54
CDC42BPA-212ENST00000478573 CDYL2Q8N8U2 506 aa5.45□□□□□ -1.54
CDC42BPA-212ENST00000478573 GPR150Q8NGU9 434 aa5.45□□□□□ -1.54
CDC42BPA-212ENST00000478573 CHTF18Q8WVB6 975 aa5.45□□□□□ -1.54
CDC42BPA-212ENST00000478573 LENG9Q96B70 501 aa5.45□□□□□ -1.54
CDC42BPA-212ENST00000478573 ASPSCR1Q9BZE9 553 aa5.45□□□□□ -1.54
CDC42BPA-212ENST00000478573 EMC7Q9NPA0 242 aa5.45□□□□□ -1.54
CDC42BPA-212ENST00000478573 MSRAQ9UJ68 235 aa5.45□□□□□ -1.54
CDC42BPA-212ENST00000478573 FZD1Q9UP38 647 aa5.45□□□□□ -1.54
CDC42BPA-212ENST00000478573 HDAC5Q9UQL6 1122 aa5.45□□□□□ -1.54
CDC42BPA-212ENST00000478573 PCDHB6Q9Y5E3 794 aa5.45□□□□□ -1.54
CDC42BPA-212ENST00000478573 ELL2O00472 640 aaPredicted RBP5.44□□□□□ -1.54
CDC42BPA-212ENST00000478573 KATNA1O75449 491 aa5.44□□□□□ -1.54
CDC42BPA-212ENST00000478573 NUDT3O95989 172 aa5.44□□□□□ -1.54
CDC42BPA-212ENST00000478573 XPAP23025 273 aaPredicted RBP5.44□□□□□ -1.54
CDC42BPA-212ENST00000478573 KPNA1P52294 538 aaPredicted RBP5.44□□□□□ -1.54
CDC42BPA-212ENST00000478573 TMPRSS15P98073 1019 aa5.44□□□□□ -1.54
CDC42BPA-212ENST00000478573 COL10A1Q03692 680 aa5.44□□□□□ -1.54
CDC42BPA-212ENST00000478573 FAPQ12884 760 aa5.44□□□□□ -1.54
CDC42BPA-212ENST00000478573 MTMR1Q13613 665 aa5.44□□□□□ -1.54
CDC42BPA-212ENST00000478573 FAM50AQ14320 339 aaKnown RBP5.44□□□□□ -1.54
CDC42BPA-212ENST00000478573 ATP13A4Q4VNC1 1196 aa5.44□□□□□ -1.54
CDC42BPA-212ENST00000478573 NAIF1Q69YI7 327 aaPredicted RBP5.44□□□□□ -1.54
CDC42BPA-212ENST00000478573 ESPNLQ6ZVH7 1005 aa5.44□□□□□ -1.54
CDC42BPA-212ENST00000478573 C11orf74Q86VG3 221 aa5.44□□□□□ -1.54
CDC42BPA-212ENST00000478573 CXorf67Q86X51 503 aaPredicted RBP5.44□□□□□ -1.54
CDC42BPA-212ENST00000478573 UNC5BQ8IZJ1 945 aa5.44□□□□□ -1.54
CDC42BPA-212ENST00000478573 KRTAP9-8Q9BYQ0 159 aa5.44□□□□□ -1.54
CDC42BPA-212ENST00000478573 ZNF768Q9H5H4 540 aaKnown RBP5.44□□□□□ -1.54
CDC42BPA-212ENST00000478573 SPTLC3Q9NUV7 552 aa5.44□□□□□ -1.54
CDC42BPA-212ENST00000478573 MARCH6O60337 910 aa5.43□□□□□ -1.54
CDC42BPA-212ENST00000478573 ULK1O75385 1050 aa5.43□□□□□ -1.54
CDC42BPA-212ENST00000478573 LY86O95711 162 aa5.43□□□□□ -1.54
CDC42BPA-212ENST00000478573 DUSP2Q05923 314 aa5.43□□□□□ -1.54
CDC42BPA-212ENST00000478573 ZBTB41Q5SVQ8 909 aa5.43□□□□□ -1.54
CDC42BPA-212ENST00000478573 RHOUQ7L0Q8 258 aa5.43□□□□□ -1.54
CDC42BPA-212ENST00000478573 FAM83AQ86UY5 434 aa5.43□□□□□ -1.54
CDC42BPA-212ENST00000478573 GLB1L3Q8NCI6 653 aaPredicted RBP5.43□□□□□ -1.54
CDC42BPA-212ENST00000478573 IL17RAQ96F46 866 aa5.43□□□□□ -1.54
CDC42BPA-212ENST00000478573 GPR101Q96P66 508 aaPredicted RBP5.43□□□□□ -1.54
CDC42BPA-212ENST00000478573 CPEB1Q9BZB8 566 aaKnown RBP5.43□□□□□ -1.54
CDC42BPA-212ENST00000478573 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.43□□□□□ -1.54
CDC42BPA-212ENST00000478573 THRAP3Q9Y2W1 955 aaKnown RBP5.43□□□□□ -1.54
CDC42BPA-212ENST00000478573 POLR2AP24928 1970 aaKnown RBP5.43□□□□□ -1.54
CDC42BPA-212ENST00000478573 LCHNA4D1U4 455 aa5.42□□□□□ -1.54
CDC42BPA-212ENST00000478573 TRIM24O15164 1050 aa5.42□□□□□ -1.54
CDC42BPA-212ENST00000478573 PPFIA4O75335 1185 aa5.42□□□□□ -1.54
CDC42BPA-212ENST00000478573 ALDH1L1O75891 902 aa5.42□□□□□ -1.54
CDC42BPA-212ENST00000478573 RHOBTB3O94955 611 aa5.42□□□□□ -1.54
CDC42BPA-212ENST00000478573 PARNO95453 639 aaKnown RBP5.42□□□□□ -1.54
CDC42BPA-212ENST00000478573 PROZP22891 400 aa5.42□□□□□ -1.54
CDC42BPA-212ENST00000478573 APOBEC3AP31941 199 aaPredicted RBP5.42□□□□□ -1.54
CDC42BPA-212ENST00000478573 PTTG1IPP53801 180 aa5.42□□□□□ -1.54
CDC42BPA-212ENST00000478573 EPHB1P54762 984 aa5.42□□□□□ -1.54
CDC42BPA-212ENST00000478573 SESN3P58005 492 aa5.42□□□□□ -1.54
CDC42BPA-212ENST00000478573 PHC1P78364 1004 aa5.42□□□□□ -1.54
CDC42BPA-212ENST00000478573 MGAT5Q09328 741 aa5.42□□□□□ -1.54
CDC42BPA-212ENST00000478573 LRRC32Q14392 662 aa5.42□□□□□ -1.54
CDC42BPA-212ENST00000478573 GPR158Q5T848 1215 aa5.42□□□□□ -1.54
CDC42BPA-212ENST00000478573 LMBR1LQ6UX01 489 aa5.42□□□□□ -1.54
CDC42BPA-212ENST00000478573 XYLT1Q86Y38 959 aa5.42□□□□□ -1.54
CDC42BPA-212ENST00000478573 COG1Q8WTW3 980 aa5.42□□□□□ -1.54
CDC42BPA-212ENST00000478573 GAB3Q8WWW8 586 aa5.42□□□□□ -1.54
CDC42BPA-212ENST00000478573 JDP2Q8WYK2 163 aa5.42□□□□□ -1.54
CDC42BPA-212ENST00000478573 SLC5A5Q92911 643 aa5.42□□□□□ -1.54
CDC42BPA-212ENST00000478573 TRPM5Q9NZQ8 1165 aa5.42□□□□□ -1.54
CDC42BPA-212ENST00000478573 ZNHIT2Q9UHR6 403 aa5.42□□□□□ -1.54
CDC42BPA-212ENST00000478573 ERCC6Q03468 1493 aa5.41□□□□□ -1.54
CDC42BPA-212ENST00000478573 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.41□□□□□ -1.54
CDC42BPA-212ENST00000478573 TGM5O43548 720 aa5.41□□□□□ -1.54
CDC42BPA-212ENST00000478573 PRKD3O94806 890 aa5.41□□□□□ -1.54
CDC42BPA-212ENST00000478573 LAG3P18627 525 aa5.41□□□□□ -1.54
CDC42BPA-212ENST00000478573 PPARAQ07869 468 aa5.41□□□□□ -1.54
CDC42BPA-212ENST00000478573 TTF1Q15361 905 aaPredicted RBP5.41□□□□□ -1.54
CDC42BPA-212ENST00000478573 VPS72Q15906 364 aa5.41□□□□□ -1.54
CDC42BPA-212ENST00000478573 SYDE2Q5VT97 1194 aa5.41□□□□□ -1.54
CDC42BPA-212ENST00000478573 IQSEC1Q6DN90 963 aa5.41□□□□□ -1.54
CDC42BPA-212ENST00000478573 MSL3Q8N5Y2 521 aaKnown RBP5.41□□□□□ -1.54
CDC42BPA-212ENST00000478573 CNTD1Q8N815 330 aa5.41□□□□□ -1.54
CDC42BPA-212ENST00000478573 OR52N2Q8NGI0 321 aa5.41□□□□□ -1.54
CDC42BPA-212ENST00000478573 PPP1R14CQ8TAE6 165 aa5.41□□□□□ -1.54
CDC42BPA-212ENST00000478573 ZNF496Q96IT1 587 aaPredicted RBP5.41□□□□□ -1.54
CDC42BPA-212ENST00000478573 NDC1Q9BTX1 674 aa5.41□□□□□ -1.54
CDC42BPA-212ENST00000478573 ENKD1Q9H0I2 346 aa5.41□□□□□ -1.54
CDC42BPA-212ENST00000478573 KCNH6Q9H252 994 aa5.41□□□□□ -1.54
CDC42BPA-212ENST00000478573 MS4A5Q9H3V2 200 aa5.41□□□□□ -1.54
CDC42BPA-212ENST00000478573 CYP4F11Q9HBI6 524 aa5.41□□□□□ -1.54
CDC42BPA-212ENST00000478573 PACSIN3Q9UKS6 424 aa5.41□□□□□ -1.54
CDC42BPA-212ENST00000478573 G3BP2Q9UN86 482 aaKnown RBP5.41□□□□□ -1.54
CDC42BPA-212ENST00000478573 SPEF1Q9Y4P9 236 aa5.41□□□□□ -1.54
CDC42BPA-212ENST00000478573 B3GALT2O43825 422 aa5.4□□□□□ -1.54
CDC42BPA-212ENST00000478573 NRP2O60462 931 aa5.4□□□□□ -1.54
CDC42BPA-212ENST00000478573 LPXNO60711 386 aa5.4□□□□□ -1.54
CDC42BPA-212ENST00000478573 PFKMP08237 780 aa5.4□□□□□ -1.54
CDC42BPA-212ENST00000478573 GZMKP49863 264 aa5.4□□□□□ -1.54
CDC42BPA-212ENST00000478573 NRG3P56975 720 aa5.4□□□□□ -1.54
CDC42BPA-212ENST00000478573 ERVK-21P61565 698 aa5.4□□□□□ -1.54
CDC42BPA-212ENST00000478573 ITKQ08881 620 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms