RNA–Protein interactions for RNA: ENST00000478389.5

NELFCD-206, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 3,581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-206ENST00000478389 FOXO4P98177 505 aa9.02□□□□□ -0.97
NELFCD-206ENST00000478389 FBXO33Q7Z6M2 555 aa9.02□□□□□ -0.97
NELFCD-206ENST00000478389 OR8H2Q8N162 312 aa9.02□□□□□ -0.97
NELFCD-206ENST00000478389 MIGA1Q8NAN2 632 aa9.02□□□□□ -0.97
NELFCD-206ENST00000478389 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.02□□□□□ -0.97
NELFCD-206ENST00000478389 ROPN1BQ9BZX4 212 aaPredicted RBP9.02□□□□□ -0.97
NELFCD-206ENST00000478389 ROPN1Q9HAT0 212 aaPredicted RBP9.02□□□□□ -0.97
NELFCD-206ENST00000478389 ZMAT5Q9UDW3 170 aaKnown RBP9.02□□□□□ -0.97
NELFCD-206ENST00000478389 PACSIN2Q9UNF0 486 aaPredicted RBP9.02□□□□□ -0.97
NELFCD-206ENST00000478389 WDR37Q9Y2I8 494 aa9.02□□□□□ -0.97
NELFCD-206ENST00000478389 BCL9O00512 1426 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 FAM187AA6NFU0 413 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 TTI1O43156 1089 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 MAP3K13O43283 966 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 ATP9AO75110 1047 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 MCL1Q07820 350 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 ALX1Q15699 326 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 CNNM4Q6P4Q7 775 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 ARL6IP6Q8N6S5 226 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 FAM13CQ8NE31 585 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 RPGRQ92834 1020 aaKnown RBP9.01□□□□□ -0.97
NELFCD-206ENST00000478389 TXLNGYQ9BZA5 131 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 TAOK3Q9H2K8 898 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 NMRK1Q9NWW6 199 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 CEP72Q9P209 647 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 CYP27B1O15528 508 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 MAP3K7O43318 606 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 KCNQ2O43526 872 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 DCTN3O75935 186 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 PDE6AP16499 860 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 HOXA7P31268 230 aaPredicted RBP9.01□□□□□ -0.97
NELFCD-206ENST00000478389 SHROOM1Q2M3G4 852 aaPredicted RBP9.01□□□□□ -0.97
NELFCD-206ENST00000478389 ANKRD40Q6AI12 368 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 KIF6Q6ZMV9 814 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 SEPT14Q6ZU15 432 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 DAAM2Q86T65 1068 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 CCDC65Q8IXS2 484 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 MARCH10Q8NA82 808 aaPredicted RBP9.01□□□□□ -0.97
NELFCD-206ENST00000478389 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.01□□□□□ -0.975e-12■□□□□ 8.3
NELFCD-206ENST00000478389 BAP1Q92560 729 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 ZNF653Q96CK0 615 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 ASIC4Q96FT7 647 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 TMOD3Q9NYL9 352 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 TRIM33Q9UPN9 1127 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 USP20Q9Y2K6 914 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 PRKAB1Q9Y478 270 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 ATP6V0A2Q9Y487 856 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 PCDHGB3Q9Y5G1 929 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 UTRNP46939 3433 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 TRIM64A6NGJ6 449 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 TRIM64BA6NI03 449 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 EYA4O95677 639 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 CYP1A2P05177 515 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 PABPC4Q13310 644 aaKnown RBP eCLIP9.01□□□□□ -0.977e-10■□□□□ 8.1
NELFCD-206ENST00000478389 PIK3AP1Q6ZUJ8 805 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 TMC4Q7Z404 712 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 ZNF654Q8IZM8 581 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 SLC17A8Q8NDX2 589 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 AZIN2Q96A70 460 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 APBA2Q99767 749 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 SPATA16Q9BXB7 569 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 PRKAG3Q9UGI9 489 aa9.01□□□□□ -0.97
NELFCD-206ENST00000478389 SLIT2O94813 1529 aa9□□□□□ -0.97
NELFCD-206ENST00000478389 SIPA1L3O60292 1781 aaPredicted RBP9□□□□□ -0.97
NELFCD-206ENST00000478389 SPDYE2BA6NHP3 402 aa9□□□□□ -0.97
NELFCD-206ENST00000478389 MAPK13O15264 365 aa9□□□□□ -0.97
NELFCD-206ENST00000478389 ECE2O60344 883 aa9□□□□□ -0.97
NELFCD-206ENST00000478389 SPDYE6P0CI01 402 aa9□□□□□ -0.97
NELFCD-206ENST00000478389 MTHFD1P11586 935 aaKnown RBP9□□□□□ -0.97
NELFCD-206ENST00000478389 ZFXP17010 805 aaPredicted RBP9□□□□□ -0.97
NELFCD-206ENST00000478389 UBE3CQ15386 1083 aa9□□□□□ -0.97
NELFCD-206ENST00000478389 SPDYE2Q495Y8 402 aa9□□□□□ -0.97
NELFCD-206ENST00000478389 MFSD5Q6N075 450 aa9□□□□□ -0.97
NELFCD-206ENST00000478389 PEX26Q7Z412 305 aa9□□□□□ -0.97
NELFCD-206ENST00000478389 IFNL3Q8IZI9 196 aa9□□□□□ -0.97
NELFCD-206ENST00000478389 BHMTQ93088 406 aa9□□□□□ -0.97
NELFCD-206ENST00000478389 RNF41Q9H4P4 317 aaPredicted RBP9□□□□□ -0.97
NELFCD-206ENST00000478389 ITGB1BP2Q9UKP3 347 aa9□□□□□ -0.97
NELFCD-206ENST00000478389 PCDH11XQ9BZA7 1347 aa9□□□□□ -0.97
NELFCD-206ENST00000478389 PCDH11YQ9BZA8 1340 aa9□□□□□ -0.97
NELFCD-206ENST00000478389 GTPBP10A4D1E9 387 aaKnown RBP9□□□□□ -0.97
NELFCD-206ENST00000478389 AFPP02771 609 aaKnown RBP9□□□□□ -0.97
NELFCD-206ENST00000478389 ITGA6P23229 1130 aa9□□□□□ -0.97
NELFCD-206ENST00000478389 MARK3P27448 753 aa9□□□□□ -0.97
NELFCD-206ENST00000478389 STX2P32856 288 aa9□□□□□ -0.97
NELFCD-206ENST00000478389 UBXN2AP68543 259 aa9□□□□□ -0.97
NELFCD-206ENST00000478389 IFI35P80217 286 aaPredicted RBP9□□□□□ -0.97
NELFCD-206ENST00000478389 LSAMPQ13449 338 aa9□□□□□ -0.97
NELFCD-206ENST00000478389 CNPY1Q3B7I2 92 aa9□□□□□ -0.97
NELFCD-206ENST00000478389 SNX30Q5VWJ9 437 aa9□□□□□ -0.97
NELFCD-206ENST00000478389 DEFB132Q7Z7B7 95 aa9□□□□□ -0.97
NELFCD-206ENST00000478389 UCMAQ8WVF2 138 aa9□□□□□ -0.97
NELFCD-206ENST00000478389 CKAP2Q8WWK9 683 aa9□□□□□ -0.97
NELFCD-206ENST00000478389 MAML3Q96JK9 1138 aa9□□□□□ -0.97
NELFCD-206ENST00000478389 LRRC37BQ96QE4 947 aa9□□□□□ -0.97
NELFCD-206ENST00000478389 HAPLN3Q96S86 360 aa9□□□□□ -0.97
NELFCD-206ENST00000478389 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9□□□□□ -0.97
NELFCD-206ENST00000478389 NKIRAS1Q9NYS0 192 aa9□□□□□ -0.97
NELFCD-206ENST00000478389 POTEFA5A3E0 1075 aa8.99□□□□□ -0.97
NELFCD-206ENST00000478389 KLRC4O43908 158 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms