RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 NHLH1Q02575 133 aa15.99■□□□□ 0.15
SMARCE1-209ENST00000478349 DSC1Q08554 894 aa15.99■□□□□ 0.15
SMARCE1-209ENST00000478349 MAPK6Q16659 721 aa15.99■□□□□ 0.15
SMARCE1-209ENST00000478349 CATSPER3Q86XQ3 398 aa15.99■□□□□ 0.15
SMARCE1-209ENST00000478349 NOSTRINQ8IVI9 506 aa15.99■□□□□ 0.15
SMARCE1-209ENST00000478349 COLGALT2Q8IYK4 626 aa15.99■□□□□ 0.15
SMARCE1-209ENST00000478349 GPR65Q8IYL9 337 aa15.99■□□□□ 0.15
SMARCE1-209ENST00000478349 KREMEN2Q8NCW0 462 aa15.99■□□□□ 0.15
SMARCE1-209ENST00000478349 DEPTORQ8TB45 409 aa15.99■□□□□ 0.15
SMARCE1-209ENST00000478349 STAMQ92783 540 aa15.99■□□□□ 0.15
SMARCE1-209ENST00000478349 IFT74Q96LB3 600 aa15.99■□□□□ 0.15
SMARCE1-209ENST00000478349 KLHL5Q96PQ7 755 aa15.99■□□□□ 0.15
SMARCE1-209ENST00000478349 PARP2Q9UGN5 583 aa15.99■□□□□ 0.15
SMARCE1-209ENST00000478349 PIEZO1Q92508 2521 aa15.99■□□□□ 0.15
SMARCE1-209ENST00000478349 PHLPP2Q6ZVD8 1323 aa15.98■□□□□ 0.15
SMARCE1-209ENST00000478349 A0A1B0GUA9 196 aa15.98■□□□□ 0.15
SMARCE1-209ENST00000478349 C2CD4DB7Z1M9 353 aa15.98■□□□□ 0.15
SMARCE1-209ENST00000478349 NPTXRO95502 500 aa15.98■□□□□ 0.15
SMARCE1-209ENST00000478349 CNPP09543 421 aaKnown RBP15.98■□□□□ 0.15
SMARCE1-209ENST00000478349 GUCY1B3Q02153 619 aa15.98■□□□□ 0.15
SMARCE1-209ENST00000478349 AMHR2Q16671 573 aa15.98■□□□□ 0.15
SMARCE1-209ENST00000478349 TTC38Q5R3I4 469 aa15.98■□□□□ 0.15
SMARCE1-209ENST00000478349 CDCA2Q69YH5 1023 aaPredicted RBP15.98■□□□□ 0.15
SMARCE1-209ENST00000478349 TMC5Q6UXY8 1006 aa15.98■□□□□ 0.15
SMARCE1-209ENST00000478349 GPR149Q86SP6 731 aa15.98■□□□□ 0.15
SMARCE1-209ENST00000478349 CMASQ8NFW8 434 aaPredicted RBP15.98■□□□□ 0.15
SMARCE1-209ENST00000478349 FBXO18Q8NFZ0 1043 aa15.98■□□□□ 0.15
SMARCE1-209ENST00000478349 NXF3Q9H4D5 531 aaKnown RBP15.98■□□□□ 0.15
SMARCE1-209ENST00000478349 SF3B1O75533 1304 aaKnown RBP eCLIP15.97■□□□□ 0.15
SMARCE1-209ENST00000478349 C2CD2LO14523 706 aa15.97■□□□□ 0.15
SMARCE1-209ENST00000478349 SPATA31C1P0DKV0 1188 aa15.97■□□□□ 0.15
SMARCE1-209ENST00000478349 NAMPTP43490 491 aa15.97■□□□□ 0.15
SMARCE1-209ENST00000478349 EFNA5P52803 228 aa15.97■□□□□ 0.15
SMARCE1-209ENST00000478349 PRPF4BQ13523 1007 aaKnown RBP15.97■□□□□ 0.15
SMARCE1-209ENST00000478349 FAM187BQ17R55 369 aa15.97■□□□□ 0.15
SMARCE1-209ENST00000478349 USP41Q3LFD5 358 aa15.97■□□□□ 0.15
SMARCE1-209ENST00000478349 PADI6Q6TGC4 694 aa15.97■□□□□ 0.15
SMARCE1-209ENST00000478349 C12orf76Q8N812 135 aaPredicted RBP15.97■□□□□ 0.15
SMARCE1-209ENST00000478349 HDAC7Q8WUI4 952 aa15.97■□□□□ 0.15
SMARCE1-209ENST00000478349 KIFAP3Q92845 792 aa15.97■□□□□ 0.15
SMARCE1-209ENST00000478349 ZFP42Q96MM3 310 aa15.97■□□□□ 0.15
SMARCE1-209ENST00000478349 VN1R3Q9BXE9 311 aa15.97■□□□□ 0.15
SMARCE1-209ENST00000478349 TMEM60Q9H2L4 133 aa15.97■□□□□ 0.15
SMARCE1-209ENST00000478349 MAN1C1Q9NR34 630 aa15.97■□□□□ 0.15
SMARCE1-209ENST00000478349 HES2Q9Y543 173 aa15.97■□□□□ 0.15
SMARCE1-209ENST00000478349 LAD1O00515 517 aa15.96■□□□□ 0.15
SMARCE1-209ENST00000478349 B4GALT5O43286 388 aa15.96■□□□□ 0.15
SMARCE1-209ENST00000478349 B4GALT3O60512 393 aa15.96■□□□□ 0.15
SMARCE1-209ENST00000478349 CYP11B2P19099 503 aa15.96■□□□□ 0.15
SMARCE1-209ENST00000478349 FXR2P51116 673 aaKnown RBP eCLIP15.96■□□□□ 0.15
SMARCE1-209ENST00000478349 AFF1P51825 1210 aaKnown RBP15.96■□□□□ 0.15
SMARCE1-209ENST00000478349 DSG1Q02413 1049 aa15.96■□□□□ 0.15
SMARCE1-209ENST00000478349 ELAVL2Q12926 359 aaKnown RBP15.96■□□□□ 0.15
SMARCE1-209ENST00000478349 ZNF174Q15697 407 aa15.96■□□□□ 0.15
SMARCE1-209ENST00000478349 DCAF4L1Q3SXM0 396 aa15.96■□□□□ 0.15
SMARCE1-209ENST00000478349 PDXDC1Q6P996 788 aa15.96■□□□□ 0.15
SMARCE1-209ENST00000478349 POTEGQ6S5H5 508 aa15.96■□□□□ 0.15
SMARCE1-209ENST00000478349 MAEAQ7L5Y9 396 aa15.96■□□□□ 0.15
SMARCE1-209ENST00000478349 ASIC4Q96FT7 647 aa15.96■□□□□ 0.15
SMARCE1-209ENST00000478349 RHOBTB2Q9BYZ6 727 aa15.96■□□□□ 0.15
SMARCE1-209ENST00000478349 MFSD1Q9H3U5 465 aa15.96■□□□□ 0.15
SMARCE1-209ENST00000478349 PLEKHA4Q9H4M7 779 aa15.96■□□□□ 0.15
SMARCE1-209ENST00000478349 MARCH5Q9NX47 278 aa15.96■□□□□ 0.15
SMARCE1-209ENST00000478349 ADAM28Q9UKQ2 775 aa15.96■□□□□ 0.15
SMARCE1-209ENST00000478349 WNT7AO00755 349 aa15.95■□□□□ 0.14
SMARCE1-209ENST00000478349 TEX28O15482 410 aa15.95■□□□□ 0.14
SMARCE1-209ENST00000478349 LILRB3O75022 631 aa15.95■□□□□ 0.14
SMARCE1-209ENST00000478349 MED24O75448 989 aa15.95■□□□□ 0.14
SMARCE1-209ENST00000478349 TADA2AO75478 443 aa15.95■□□□□ 0.14
SMARCE1-209ENST00000478349 PRKCBP05771 671 aa15.95■□□□□ 0.14
SMARCE1-209ENST00000478349 WEE2P0C1S8 567 aa15.95■□□□□ 0.14
SMARCE1-209ENST00000478349 AKAP5P24588 427 aa15.95■□□□□ 0.14
SMARCE1-209ENST00000478349 CCT6AP40227 531 aaKnown RBP15.95■□□□□ 0.14
SMARCE1-209ENST00000478349 TUSC3Q13454 348 aa15.95■□□□□ 0.14
SMARCE1-209ENST00000478349 FUT10Q6P4F1 479 aa15.95■□□□□ 0.14
SMARCE1-209ENST00000478349 ALYREFQ86V81 257 aaKnown RBP15.95■□□□□ 0.14
SMARCE1-209ENST00000478349 RNF168Q8IYW5 571 aaPredicted RBP15.95■□□□□ 0.14
SMARCE1-209ENST00000478349 FZD8Q9H461 694 aa15.95■□□□□ 0.14
SMARCE1-209ENST00000478349 RXFP1Q9HBX9 757 aa15.95■□□□□ 0.14
SMARCE1-209ENST00000478349 GPRC5CQ9NQ84 441 aa15.95■□□□□ 0.14
SMARCE1-209ENST00000478349 FNIP2Q9P278 1114 aa15.95■□□□□ 0.14
SMARCE1-209ENST00000478349 LRWD1Q9UFC0 647 aa15.95■□□□□ 0.14
SMARCE1-209ENST00000478349 ACKR2O00590 384 aa15.94■□□□□ 0.14
SMARCE1-209ENST00000478349 ST18O60284 1047 aa15.94■□□□□ 0.14
SMARCE1-209ENST00000478349 MRE11P49959 708 aa15.94■□□□□ 0.14
SMARCE1-209ENST00000478349 ST3GAL1Q11201 340 aa15.94■□□□□ 0.14
SMARCE1-209ENST00000478349 PDIA5Q14554 519 aa15.94■□□□□ 0.14
SMARCE1-209ENST00000478349 HSP90AA2PQ14568 343 aaPredicted RBP15.94■□□□□ 0.14
SMARCE1-209ENST00000478349 UPF2Q9HAU5 1272 aaKnown RBP15.94■□□□□ 0.14
SMARCE1-209ENST00000478349 ZDHHC7Q9NXF8 308 aa15.94■□□□□ 0.14
SMARCE1-209ENST00000478349 CDH22Q9UJ99 828 aa15.94■□□□□ 0.14
SMARCE1-209ENST00000478349 ARID2Q68CP9 1835 aa15.94■□□□□ 0.14
SMARCE1-209ENST00000478349 BRD1O95696 1058 aa15.93■□□□□ 0.14
SMARCE1-209ENST00000478349 THP07101 528 aa15.93■□□□□ 0.14
SMARCE1-209ENST00000478349 LIG1P18858 919 aa15.93■□□□□ 0.14
SMARCE1-209ENST00000478349 AVPR2P30518 371 aa15.93■□□□□ 0.14
SMARCE1-209ENST00000478349 KIAA0319Q5VV43 1072 aa15.93■□□□□ 0.14
SMARCE1-209ENST00000478349 KRT79Q5XKE5 535 aa15.93■□□□□ 0.14
SMARCE1-209ENST00000478349 SNX29Q8TEQ0 813 aa15.93■□□□□ 0.14
SMARCE1-209ENST00000478349 BHMT2Q9H2M3 363 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms