RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 KLK14Q9P0G3 267 aa17.14■□□□□ 0.33
HMGA1-206ENST00000478214 KANSL3Q9P2N6 904 aa17.14■□□□□ 0.33
HMGA1-206ENST00000478214 KCNG1Q9UIX4 513 aa17.14■□□□□ 0.33
HMGA1-206ENST00000478214 TNFSF13BQ9Y275 285 aa17.14■□□□□ 0.33
HMGA1-206ENST00000478214 MAPTP10636 758 aaKnown RBP17.13■□□□□ 0.33
HMGA1-206ENST00000478214 STAT6P42226 847 aa17.13■□□□□ 0.33
HMGA1-206ENST00000478214 NCKAP1LP55160 1127 aa17.13■□□□□ 0.33
HMGA1-206ENST00000478214 KRT17Q04695 432 aa17.13■□□□□ 0.33
HMGA1-206ENST00000478214 HYAL1Q12794 435 aa17.13■□□□□ 0.33
HMGA1-206ENST00000478214 DCAF4L1Q3SXM0 396 aa17.13■□□□□ 0.33
HMGA1-206ENST00000478214 AXDND1Q5T1B0 1012 aaPredicted RBP17.13■□□□□ 0.33
HMGA1-206ENST00000478214 SHC4Q6S5L8 630 aa17.13■□□□□ 0.33
HMGA1-206ENST00000478214 SV2BQ7L1I2 683 aa17.13■□□□□ 0.33
HMGA1-206ENST00000478214 GSTCDQ8NEC7 633 aa17.13■□□□□ 0.33
HMGA1-206ENST00000478214 MICAL1Q8TDZ2 1067 aa17.13■□□□□ 0.33
HMGA1-206ENST00000478214 BCL7CQ8WUZ0 217 aaPredicted RBP17.13■□□□□ 0.33
HMGA1-206ENST00000478214 ATXN2LQ8WWM7 1075 aaKnown RBP17.13■□□□□ 0.33
HMGA1-206ENST00000478214 PARVGQ9HBI0 331 aa17.13■□□□□ 0.33
HMGA1-206ENST00000478214 PUF60Q9UHX1 559 aaKnown RBP17.13■□□□□ 0.33
HMGA1-206ENST00000478214 CFAP45Q9UL16 551 aa17.13■□□□□ 0.33
HMGA1-206ENST00000478214 COG5Q9UP83 839 aa17.13■□□□□ 0.33
HMGA1-206ENST00000478214 LZTS1Q9Y250 596 aa17.13■□□□□ 0.33
HMGA1-206ENST00000478214 BRWD1Q9NSI6 2320 aa17.12■□□□□ 0.33
HMGA1-206ENST00000478214 MYMKA6NI61 221 aa17.12■□□□□ 0.33
HMGA1-206ENST00000478214 TBCAO75347 108 aaKnown RBP17.12■□□□□ 0.33
HMGA1-206ENST00000478214 RECQL4O94761 1208 aa17.12■□□□□ 0.33
HMGA1-206ENST00000478214 GTF2F1P35269 517 aaKnown RBP eCLIP17.12■□□□□ 0.33
HMGA1-206ENST00000478214 ME1P48163 572 aa17.12■□□□□ 0.33
HMGA1-206ENST00000478214 STRN3Q13033 797 aa17.12■□□□□ 0.33
HMGA1-206ENST00000478214 DYMQ7RTS9 669 aa17.12■□□□□ 0.33
HMGA1-206ENST00000478214 HAUS6Q7Z4H7 955 aa17.12■□□□□ 0.33
HMGA1-206ENST00000478214 ADGRD2Q7Z7M1 963 aa17.12■□□□□ 0.33
HMGA1-206ENST00000478214 TMEM169Q96HH4 297 aa17.12■□□□□ 0.33
HMGA1-206ENST00000478214 IGSF21Q96ID5 467 aa17.12■□□□□ 0.33
HMGA1-206ENST00000478214 FAM193BQ96PV7 902 aaPredicted RBP17.12■□□□□ 0.33
HMGA1-206ENST00000478214 CDT1Q9H211 546 aa17.12■□□□□ 0.33
HMGA1-206ENST00000478214 UBE2ZQ9H832 354 aaPredicted RBP17.12■□□□□ 0.33
HMGA1-206ENST00000478214 PTPRHQ9HD43 1115 aa17.12■□□□□ 0.33
HMGA1-206ENST00000478214 RCOR1Q9UKL0 485 aa17.12■□□□□ 0.33
HMGA1-206ENST00000478214 PCDHA7Q9UN72 937 aa17.12■□□□□ 0.33
HMGA1-206ENST00000478214 GDAQ9Y2T3 454 aa17.12■□□□□ 0.33
HMGA1-206ENST00000478214 VCANP13611 3396 aa17.11■□□□□ 0.33
HMGA1-206ENST00000478214 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.11■□□□□ 0.33
HMGA1-206ENST00000478214 FSCN2O14926 492 aa17.11■□□□□ 0.33
HMGA1-206ENST00000478214 TRAK2O60296 914 aa17.11■□□□□ 0.33
HMGA1-206ENST00000478214 MRPS5P82675 430 aaKnown RBP17.11■□□□□ 0.33
HMGA1-206ENST00000478214 ZNF568Q3ZCX4 644 aa17.11■□□□□ 0.33
HMGA1-206ENST00000478214 PLPP4Q5VZY2 271 aa17.11■□□□□ 0.33
HMGA1-206ENST00000478214 ZBTB33Q86T24 672 aa17.11■□□□□ 0.33
HMGA1-206ENST00000478214 COLGALT2Q8IYK4 626 aa17.11■□□□□ 0.33
HMGA1-206ENST00000478214 CEP120Q8N960 986 aa17.11■□□□□ 0.33
HMGA1-206ENST00000478214 DDX12PQ92771 950 aa17.11■□□□□ 0.33
HMGA1-206ENST00000478214 DNAJC19Q96DA6 116 aa17.11■□□□□ 0.33
HMGA1-206ENST00000478214 ZBTB45Q96K62 511 aaPredicted RBP17.11■□□□□ 0.33
HMGA1-206ENST00000478214 ASB2Q96Q27 587 aa17.11■□□□□ 0.33
HMGA1-206ENST00000478214 RPS6KC1Q96S38 1066 aa17.11■□□□□ 0.33
HMGA1-206ENST00000478214 FIZ1Q96SL8 496 aa17.11■□□□□ 0.33
HMGA1-206ENST00000478214 TCF25Q9BQ70 676 aa17.11■□□□□ 0.33
HMGA1-206ENST00000478214 TMEM175Q9BSA9 504 aa17.11■□□□□ 0.33
HMGA1-206ENST00000478214 CXCL16Q9H2A7 254 aa17.11■□□□□ 0.33
HMGA1-206ENST00000478214 IGFLR1Q9H665 355 aa17.11■□□□□ 0.33
HMGA1-206ENST00000478214 MYH15Q9Y2K3 1946 aa17.11■□□□□ 0.33
HMGA1-206ENST00000478214 PLXNA4Q9HCM2 1894 aa17.1■□□□□ 0.33
HMGA1-206ENST00000478214 H0YCG3 227 aa17.1■□□□□ 0.33
HMGA1-206ENST00000478214 K7ENM7 598 aa17.1■□□□□ 0.33
HMGA1-206ENST00000478214 ABLIM1O14639 778 aa17.1■□□□□ 0.33
HMGA1-206ENST00000478214 NRP1O14786 923 aa17.1■□□□□ 0.33
HMGA1-206ENST00000478214 ALDH2P05091 517 aa17.1■□□□□ 0.33
HMGA1-206ENST00000478214 PROZP22891 400 aa17.1■□□□□ 0.33
HMGA1-206ENST00000478214 NMT1P30419 496 aaKnown RBP17.1■□□□□ 0.33
HMGA1-206ENST00000478214 DSC1Q08554 894 aa17.1■□□□□ 0.33
HMGA1-206ENST00000478214 COL19A1Q14993 1142 aa17.1■□□□□ 0.33
HMGA1-206ENST00000478214 E2F4Q16254 413 aa17.1■□□□□ 0.33
HMGA1-206ENST00000478214 EP400NLQ6ZTU2 488 aa17.1■□□□□ 0.33
HMGA1-206ENST00000478214 TMC7Q7Z402 723 aa17.1■□□□□ 0.33
HMGA1-206ENST00000478214 APBB1IPQ7Z5R6 666 aaPredicted RBP17.1■□□□□ 0.33
HMGA1-206ENST00000478214 RBM23Q86U06 439 aaKnown RBP17.1■□□□□ 0.33
HMGA1-206ENST00000478214 TCHPQ9BT92 498 aa17.1■□□□□ 0.33
HMGA1-206ENST00000478214 ENTPD7Q9NQZ7 604 aa17.1■□□□□ 0.33
HMGA1-206ENST00000478214 FAN1Q9Y2M0 1017 aa17.1■□□□□ 0.33
HMGA1-206ENST00000478214 PRG3Q9Y2Y8 225 aaPredicted RBP17.1■□□□□ 0.33
HMGA1-206ENST00000478214 ZMYM2Q9UBW7 1377 aa17.1■□□□□ 0.33
HMGA1-206ENST00000478214 CARNS1A5YM72 827 aa17.09■□□□□ 0.33
HMGA1-206ENST00000478214 PTGESO14684 152 aa17.09■□□□□ 0.33
HMGA1-206ENST00000478214 HARSP12081 509 aaKnown RBP17.09■□□□□ 0.33
HMGA1-206ENST00000478214 KCNA5P22460 613 aa17.09■□□□□ 0.33
HMGA1-206ENST00000478214 OR1G1P47890 313 aa17.09■□□□□ 0.33
HMGA1-206ENST00000478214 NRIP1P48552 1158 aa17.09■□□□□ 0.33
HMGA1-206ENST00000478214 GRIK3Q13003 919 aa17.09■□□□□ 0.33
HMGA1-206ENST00000478214 TJAP1Q5JTD0 557 aa17.09■□□□□ 0.33
HMGA1-206ENST00000478214 PDE12Q6L8Q7 609 aaKnown RBP17.09■□□□□ 0.33
HMGA1-206ENST00000478214 MPZL3Q6UWV2 235 aa17.09■□□□□ 0.33
HMGA1-206ENST00000478214 ZPBP2Q6X784 338 aa17.09■□□□□ 0.33
HMGA1-206ENST00000478214 SFR1Q86XK3 245 aa17.09■□□□□ 0.33
HMGA1-206ENST00000478214 FAM178BQ8IXR5 827 aa17.09■□□□□ 0.33
HMGA1-206ENST00000478214 STAMQ92783 540 aa17.09■□□□□ 0.33
HMGA1-206ENST00000478214 KCNN1Q92952 543 aa17.09■□□□□ 0.33
HMGA1-206ENST00000478214 PPP2R3CQ969Q6 453 aa17.09■□□□□ 0.33
HMGA1-206ENST00000478214 PABPC5Q96DU9 382 aaKnown RBP17.09■□□□□ 0.33
HMGA1-206ENST00000478214 VN1R3Q9BXE9 311 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms