RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, humanhuman

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-208ENST00000478188 UPP2O95045 317 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 EOMESO95936 686 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 AVPP01185 164 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 BMP1P13497 986 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 ARF4P18085 180 aaPredicted RBP4.7□□□□□ -1.66
POLR2B-208ENST00000478188 GUCY2CP25092 1073 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 CDC25AP30304 524 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 ZNF131P52739 623 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 PLCB3Q01970 1234 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 HYAL1Q12794 435 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 PKP1Q13835 747 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 PCBP1Q15365 356 aaKnown RBP eCLIP4.7□□□□□ -1.66
POLR2B-208ENST00000478188 NT5DC1Q5TFE4 455 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 FAM173BQ6P4H8 233 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 CD300LGQ6UXG3 332 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 USP49Q70CQ1 688 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 OTUD6AQ7L8S5 288 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 TRMT1LQ7Z2T5 733 aaKnown RBP4.7□□□□□ -1.66
POLR2B-208ENST00000478188 ADGRD2Q7Z7M1 963 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 EXOC8Q8IYI6 725 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 SLC39A11Q8N1S5 342 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 FIBCD1Q8N539 461 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 SLC7A3Q8WY07 619 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 NACC1Q96RE7 527 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 YME1L1Q96TA2 773 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 GAS2L1Q99501 681 aaPredicted RBP4.7□□□□□ -1.66
POLR2B-208ENST00000478188 STRA6Q9BX79 667 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 HAPLN2Q9GZV7 340 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 PDZD7Q9H5P4 517 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 UPF2Q9HAU5 1272 aaKnown RBP4.7□□□□□ -1.66
POLR2B-208ENST00000478188 FAM105AQ9NUU6 356 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 MARCH5Q9NX47 278 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 MIOSQ9NXC5 875 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 PCDHGC5Q9Y5F6 944 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 OBSL1O75147 1896 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 A0A1B0GUA9 196 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 USO1O60763 962 aaKnown RBP4.7□□□□□ -1.66
POLR2B-208ENST00000478188 LILRB3O75022 631 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 TBX10O75333 385 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 BRD1O95696 1058 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 ATP2B1P20020 1258 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 SFPQP23246 707 aaKnown RBP eCLIP4.7□□□□□ -1.66
POLR2B-208ENST00000478188 NAMPTP43490 491 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 MRE11P49959 708 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 GPM6BQ13491 265 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 MXD4Q14582 209 aaPredicted RBP4.7□□□□□ -1.66
POLR2B-208ENST00000478188 XKR4Q5GH76 650 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 ODR4Q5SWX8 454 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 RINT1Q6NUQ1 792 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 KCTD17Q8N5Z5 321 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 SYT2Q8N9I0 419 aaPredicted RBP4.7□□□□□ -1.66
POLR2B-208ENST00000478188 KLHL23Q8NBE8 558 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 RNF149Q8NC42 400 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 SNX29Q8TEQ0 813 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 LPPQ93052 612 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 CCDC51Q96ER9 411 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 MSLNLQ96KJ4 702 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 PCMTD1Q96MG8 357 aaPredicted RBP4.7□□□□□ -1.66
POLR2B-208ENST00000478188 NLRP4Q96MN2 994 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 USP28Q96RU2 1077 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 USB1Q9BQ65 265 aaKnown RBP4.7□□□□□ -1.66
POLR2B-208ENST00000478188 PRDM9Q9NQV7 894 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 DDX19AQ9NUU7 478 aaKnown RBP4.7□□□□□ -1.66
POLR2B-208ENST00000478188 TYW1Q9NV66 732 aaKnown RBP4.7□□□□□ -1.66
POLR2B-208ENST00000478188 LRWD1Q9UFC0 647 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 LZTS1Q9Y250 596 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 RWDD3Q9Y3V2 267 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 BRWD1Q9NSI6 2320 aa4.7□□□□□ -1.66
POLR2B-208ENST00000478188 DDHD2O94830 711 aa4.69□□□□□ -1.66
POLR2B-208ENST00000478188 STAG3L1P0CL83 205 aa4.69□□□□□ -1.66
POLR2B-208ENST00000478188 AXLP30530 894 aa4.69□□□□□ -1.66
POLR2B-208ENST00000478188 CTNNB1P35222 781 aa4.69□□□□□ -1.66
POLR2B-208ENST00000478188 CCT6AP40227 531 aaKnown RBP4.69□□□□□ -1.66
POLR2B-208ENST00000478188 RAB27AP51159 221 aa4.69□□□□□ -1.66
POLR2B-208ENST00000478188 NCKAP1LP55160 1127 aa4.69□□□□□ -1.66
POLR2B-208ENST00000478188 ERVFC1P60507 584 aa4.69□□□□□ -1.66
POLR2B-208ENST00000478188 NFX1Q12986 1120 aaKnown RBP4.69□□□□□ -1.66
POLR2B-208ENST00000478188 SF3A1Q15459 793 aaKnown RBP4.69□□□□□ -1.66
POLR2B-208ENST00000478188 QPCTQ16769 361 aa4.69□□□□□ -1.66
POLR2B-208ENST00000478188 PAN2Q504Q3 1202 aaKnown RBP4.69□□□□□ -1.66
POLR2B-208ENST00000478188 TCEAL5Q5H9L2 206 aa4.69□□□□□ -1.66
POLR2B-208ENST00000478188 EEF1DP3Q658K8 133 aa4.69□□□□□ -1.66
POLR2B-208ENST00000478188 LARP1BQ659C4 914 aaKnown RBP4.69□□□□□ -1.66
POLR2B-208ENST00000478188 HAUS3Q68CZ6 603 aa4.69□□□□□ -1.66
POLR2B-208ENST00000478188 LRRC43Q8N309 656 aa4.69□□□□□ -1.66
POLR2B-208ENST00000478188 MCPH1Q8NEM0 835 aa4.69□□□□□ -1.66
POLR2B-208ENST00000478188 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.69□□□□□ -1.66
POLR2B-208ENST00000478188 HELQQ8TDG4 1101 aa4.69□□□□□ -1.66
POLR2B-208ENST00000478188 RSPH1Q8WYR4 309 aa4.69□□□□□ -1.66
POLR2B-208ENST00000478188 CPB2Q96IY4 423 aa4.69□□□□□ -1.66
POLR2B-208ENST00000478188 AK8Q96MA6 479 aa4.69□□□□□ -1.66
POLR2B-208ENST00000478188 NTPCRQ9BSD7 190 aaKnown RBP4.69□□□□□ -1.66
POLR2B-208ENST00000478188 KIFC3Q9BVG8 833 aa4.69□□□□□ -1.66
POLR2B-208ENST00000478188 CCSER1Q9C0I3 900 aa4.69□□□□□ -1.66
POLR2B-208ENST00000478188 BHMT2Q9H2M3 363 aa4.69□□□□□ -1.66
POLR2B-208ENST00000478188 NRDE2Q9H7Z3 1164 aa4.69□□□□□ -1.66
POLR2B-208ENST00000478188 TBC1D13Q9NVG8 400 aa4.69□□□□□ -1.66
POLR2B-208ENST00000478188 MTUS1Q9ULD2 1270 aa4.69□□□□□ -1.66
POLR2B-208ENST00000478188 KIAA1024Q9UPX6 916 aa4.69□□□□□ -1.66
POLR2B-208ENST00000478188 IPPQ9Y573 584 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms