RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 TDP2O95551 362 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 GNA14O95837 355 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 FCER1AP12319 257 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 NPR1P16066 1061 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 KCNA3P22001 575 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 ALDH1B1P30837 517 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 HNRNPH3P31942 346 aaKnown RBP5.44□□□□□ -1.54
SF3B6-202ENST00000478050 SHMT1P34896 483 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 TNNI2P48788 182 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 VAV2P52735 878 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 FKBP1AP62942 108 aaKnown RBP5.44□□□□□ -1.54
SF3B6-202ENST00000478050 SMC1AQ14683 1233 aaKnown RBP5.44□□□□□ -1.54
SF3B6-202ENST00000478050 COL19A1Q14993 1142 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 SPA17Q15506 151 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 LONRF2Q1L5Z9 754 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 CCDC96Q2M329 555 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 VWA3BQ502W6 1294 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 MIIPQ5JXC2 388 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 CCDC122Q5T0U0 273 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 TAF3Q5VWG9 929 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 PAPD7Q5XG87 772 aaKnown RBP5.44□□□□□ -1.54
SF3B6-202ENST00000478050 IQCEQ6IPM2 695 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 MOXD1Q6UVY6 613 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 HDXQ7Z353 690 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 TRAPPC11Q7Z392 1133 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 CCDC84Q86UT8 332 aaPredicted RBP5.44□□□□□ -1.54
SF3B6-202ENST00000478050 PNMA8AQ86V59 439 aaPredicted RBP5.44□□□□□ -1.54
SF3B6-202ENST00000478050 ETFBKMTQ8IXQ9 262 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 CCDC65Q8IXS2 484 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 ADGRF4Q8IZF3 695 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 CEP120Q8N960 986 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 DCAF4Q8WV16 495 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 TEKT1Q969V4 418 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 MRIQ9BWK5 157 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 FUT8Q9BYC5 575 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 TMX4Q9H1E5 349 aaPredicted RBP5.44□□□□□ -1.54
SF3B6-202ENST00000478050 ACBD3Q9H3P7 528 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 ANKZF1Q9H8Y5 726 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 NHEJ1Q9H9Q4 299 aaPredicted RBP5.44□□□□□ -1.54
SF3B6-202ENST00000478050 CYP4F12Q9HCS2 524 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 SLC39A2Q9NP94 309 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 USP40Q9NVE5 1235 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 ABI2Q9NYB9 513 aaPredicted RBP5.44□□□□□ -1.54
SF3B6-202ENST00000478050 DDX25Q9UHL0 483 aaKnown RBP5.44□□□□□ -1.54
SF3B6-202ENST00000478050 GUCA1BQ9UMX6 200 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 SAR1BQ9Y6B6 198 aa5.44□□□□□ -1.54
SF3B6-202ENST00000478050 RBBP6Q7Z6E9 1792 aaKnown RBP5.44□□□□□ -1.54
SF3B6-202ENST00000478050 COL2A1P02458 1487 aaPredicted RBP5.44□□□□□ -1.54
SF3B6-202ENST00000478050 CYP3A7-CYP3A51PA0A087WV96 503 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 TARSL2A2RTX5 802 aaKnown RBP5.43□□□□□ -1.54
SF3B6-202ENST00000478050 MPHOSPH10O00566 681 aaKnown RBP5.43□□□□□ -1.54
SF3B6-202ENST00000478050 MAP2K7O14733 419 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 EDIL3O43854 480 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 TACC1O75410 805 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 FARP2O94887 1054 aaPredicted RBP5.43□□□□□ -1.54
SF3B6-202ENST00000478050 KIF4AO95239 1232 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 LCA5LO95447 670 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 NPR3P17342 541 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 CYP3A7P24462 503 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 OAS2P29728 719 aaKnown RBP5.43□□□□□ -1.54
SF3B6-202ENST00000478050 PDE6BP35913 854 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 EIF1AXP47813 144 aaKnown RBP5.43□□□□□ -1.54
SF3B6-202ENST00000478050 USP14P54578 494 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 HDLBPQ00341 1268 aaKnown RBP5.43□□□□□ -1.54
SF3B6-202ENST00000478050 EHHADHQ08426 723 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 C19orf57Q0VDD7 668 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 KIF5AQ12840 1032 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 COASYQ13057 564 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 NOGQ13253 232 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 AP3B2Q13367 1082 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 UBE2SQ16763 222 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 MAP9Q49MG5 647 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 FAM26FQ5R3K3 315 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 BEND6Q5SZJ8 279 aaPredicted RBP5.43□□□□□ -1.54
SF3B6-202ENST00000478050 MAP1SQ66K74 1059 aaPredicted RBP5.43□□□□□ -1.54
SF3B6-202ENST00000478050 CCDC70Q6NSX1 233 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 CDC42EP5Q6NZY7 148 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 WDR93Q6P2C0 686 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 DYMQ7RTS9 669 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 TEX2Q8IWB9 1127 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.43□□□□□ -1.54
SF3B6-202ENST00000478050 SLFN12Q8IYM2 578 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 MYOCDQ8IZQ8 938 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 CERS5Q8N5B7 392 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 NEK11Q8NG66 645 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 FBLIM1Q8WUP2 373 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 RUBCNQ92622 972 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 MKL1Q969V6 931 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 CCDC42Q96M95 316 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 MBOAT7Q96N66 472 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 YIPF2Q9BWQ6 316 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 EPC1Q9H2F5 836 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 DHX36Q9H2U1 1008 aaKnown RBP5.43□□□□□ -1.54
SF3B6-202ENST00000478050 NDST4Q9H3R1 872 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 ZSWIM4Q9H7M6 989 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 PSTPIP2Q9H939 334 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 DDX4Q9NQI0 724 aaKnown RBP5.43□□□□□ -1.54
SF3B6-202ENST00000478050 PAK6Q9NQU5 681 aaPredicted RBP5.43□□□□□ -1.54
SF3B6-202ENST00000478050 AGPAT5Q9NUQ2 364 aa5.43□□□□□ -1.54
SF3B6-202ENST00000478050 SAGE1Q9NXZ1 904 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms