RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 IGKV6-21A0A0C4DH24 114 aa8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 FAM86B1E9PN63 330 aa8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 IPO5O00410 1097 aaKnown RBP8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 CCL16O15467 120 aa8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 ZNF862O60290 1169 aa8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 EPN2O95208 641 aa8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 PLEKHA8P1O95397 391 aa8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 CAPNS1P04632 268 aa8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 PSAPP07602 524 aa8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 POU2F2P09086 479 aa8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 FAM86B2P0C5J1 330 aa8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 SFPQP23246 707 aaKnown RBP eCLIP8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 HOXC13P31276 330 aa8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 OR1G1P47890 313 aa8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 RBM25P49756 843 aaKnown RBP8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 ZNF252P-AS1Q0IIN9 211 aa8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 TARBP2Q15633 366 aaKnown RBP8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 USP41Q3LFD5 358 aa8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 RNF43Q68DV7 783 aa8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 HEATR6Q6AI08 1181 aaKnown RBP8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 ZNF746Q6NUN9 644 aaPredicted RBP8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 CWC27Q6UX04 472 aaKnown RBP8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 CEP68Q76N32 757 aa8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 MAP4K3Q8IVH8 894 aa8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 GLYCTKQ8IVS8 523 aa8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 SMAP1Q8IYB5 467 aaPredicted RBP8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 CMTR1Q8N1G2 835 aaKnown RBP8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 ELSPBP1Q96BH3 223 aa8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 PGBD1Q96JS3 809 aa8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 FAM167AQ96KS9 214 aa8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 CEP89Q96ST8 783 aa8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 CLSTN3Q9BQT9 956 aa8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 LZTS2Q9BRK4 669 aa8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 INO80BQ9C086 356 aaPredicted RBP8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 TRPV5Q9NQA5 729 aa8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 NRBP2Q9NSY0 501 aa8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 C2orf42Q9NWW7 574 aa8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 MIOSQ9NXC5 875 aa8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 GDE1Q9NZC3 331 aa8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 DNMT3BQ9UBC3 853 aaKnown RBP8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 BAZ2BQ9UIF8 2168 aaKnown RBP8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 F5P12259 2224 aa8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 CNTNAP2Q9UHC6 1331 aa8.26□□□□□ -1.09
SPTLC1-205ENST00000477888 AKAP13Q12802 2813 aa8.25□□□□□ -1.09
SPTLC1-205ENST00000477888 IGLV3-22A0A075B6J6 115 aa8.25□□□□□ -1.09
SPTLC1-205ENST00000477888 hCG_1642624A0A1W2PR95 340 aa8.25□□□□□ -1.09
SPTLC1-205ENST00000477888 ERICH2A1L162 156 aa8.25□□□□□ -1.09
SPTLC1-205ENST00000477888 CYSRT1A8MQ03 144 aa8.25□□□□□ -1.09
SPTLC1-205ENST00000477888 FOSP01100 380 aaPredicted RBP8.25□□□□□ -1.09
SPTLC1-205ENST00000477888 OATP04181 439 aa8.25□□□□□ -1.09
SPTLC1-205ENST00000477888 C8AP07357 584 aa8.25□□□□□ -1.09
SPTLC1-205ENST00000477888 PRR29P0C7W0 189 aa8.25□□□□□ -1.09
SPTLC1-205ENST00000477888 FCARP24071 287 aa8.25□□□□□ -1.09
SPTLC1-205ENST00000477888 HOXA11P31270 313 aaPredicted RBP8.25□□□□□ -1.09
SPTLC1-205ENST00000477888 SREBF1P36956 1147 aa8.25□□□□□ -1.09
SPTLC1-205ENST00000477888 CREMQ03060 361 aa8.25□□□□□ -1.09
SPTLC1-205ENST00000477888 TRDNQ13061 729 aa8.25□□□□□ -1.09
SPTLC1-205ENST00000477888 PTGDRQ13258 359 aa8.25□□□□□ -1.09
SPTLC1-205ENST00000477888 PABPC1LQ4VXU2 614 aaKnown RBP8.25□□□□□ -1.09
SPTLC1-205ENST00000477888 PPM1LQ5SGD2 360 aa8.25□□□□□ -1.09
SPTLC1-205ENST00000477888 UBXN11Q5T124 520 aa8.25□□□□□ -1.09
SPTLC1-205ENST00000477888 SH3PXD2AQ5TCZ1 1133 aa8.25□□□□□ -1.09
SPTLC1-205ENST00000477888 ANKRD45Q5TZF3 282 aa8.25□□□□□ -1.09
SPTLC1-205ENST00000477888 FUT10Q6P4F1 479 aa8.25□□□□□ -1.09
SPTLC1-205ENST00000477888 WDR5BQ86VZ2 330 aa8.25□□□□□ -1.09
SPTLC1-205ENST00000477888 PLA2G4DQ86XP0 818 aa8.25□□□□□ -1.09
SPTLC1-205ENST00000477888 SPDYE1Q8NFV5 336 aaPredicted RBP8.25□□□□□ -1.09
SPTLC1-205ENST00000477888 CTCFLQ8NI51 663 aaPredicted RBP8.25□□□□□ -1.09
SPTLC1-205ENST00000477888 RILPL2Q969X0 211 aa8.25□□□□□ -1.09
SPTLC1-205ENST00000477888 MCRS1Q96EZ8 462 aa8.25□□□□□ -1.09
SPTLC1-205ENST00000477888 ANO3Q9BYT9 981 aa8.25□□□□□ -1.09
SPTLC1-205ENST00000477888 SMOC1Q9H4F8 434 aa8.25□□□□□ -1.09
SPTLC1-205ENST00000477888 IFT122Q9HBG6 1241 aa8.25□□□□□ -1.09
SPTLC1-205ENST00000477888 ZNF334Q9HCZ1 680 aaPredicted RBP8.25□□□□□ -1.09
SPTLC1-205ENST00000477888 TBC1D22BQ9NU19 505 aa8.25□□□□□ -1.09
SPTLC1-205ENST00000477888 AGPAT5Q9NUQ2 364 aa8.25□□□□□ -1.09
SPTLC1-205ENST00000477888 HCFC1R1Q9NWW0 138 aa8.25□□□□□ -1.09
SPTLC1-205ENST00000477888 POLIQ9UNA4 740 aa8.25□□□□□ -1.09
SPTLC1-205ENST00000477888 GPSM3Q9Y4H4 160 aa8.25□□□□□ -1.09
SPTLC1-205ENST00000477888 PCDHGA5Q9Y5G8 931 aa8.25□□□□□ -1.09
SPTLC1-205ENST00000477888 LAMA1P25391 3075 aa8.25□□□□□ -1.09
SPTLC1-205ENST00000477888 ARL5CA6NH57 179 aa8.24□□□□□ -1.09
SPTLC1-205ENST00000477888 C4orf47A7E2U8 309 aa8.24□□□□□ -1.09
SPTLC1-205ENST00000477888 NRG2O14511 850 aaPredicted RBP8.24□□□□□ -1.09
SPTLC1-205ENST00000477888 XYLBO75191 536 aa8.24□□□□□ -1.09
SPTLC1-205ENST00000477888 CEACAM1P13688 526 aa8.24□□□□□ -1.09
SPTLC1-205ENST00000477888 GNAQP50148 359 aa8.24□□□□□ -1.09
SPTLC1-205ENST00000477888 MLLT6P55198 1093 aaPredicted RBP8.24□□□□□ -1.09
SPTLC1-205ENST00000477888 HNRNPUQ00839 825 aaKnown RBP eCLIP8.24□□□□□ -1.09
SPTLC1-205ENST00000477888 GRM2Q14416 872 aa8.24□□□□□ -1.09
SPTLC1-205ENST00000477888 SLC5A9Q2M3M2 681 aa8.24□□□□□ -1.09
SPTLC1-205ENST00000477888 UVSSAQ2YD98 709 aa8.24□□□□□ -1.09
SPTLC1-205ENST00000477888 WDR44Q5JSH3 913 aa8.24□□□□□ -1.09
SPTLC1-205ENST00000477888 RTP2Q5QGT7 225 aa8.24□□□□□ -1.09
SPTLC1-205ENST00000477888 LIN9Q5TKA1 542 aa8.24□□□□□ -1.09
SPTLC1-205ENST00000477888 TCEAL6Q6IPX3 200 aa8.24□□□□□ -1.09
SPTLC1-205ENST00000477888 TYW1BQ6NUM6 668 aa8.24□□□□□ -1.09
SPTLC1-205ENST00000477888 PRSS55Q6UWB4 352 aaPredicted RBP8.24□□□□□ -1.09
SPTLC1-205ENST00000477888 CATSPER4Q7RTX7 472 aa8.24□□□□□ -1.09
SPTLC1-205ENST00000477888 CACNA2D4Q7Z3S7 1137 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms