RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 DMRT1Q9Y5R6 373 aa6.34□□□□□ -1.39
VPS50-213ENST00000477572 GOLGA8AA7E2F4 631 aa6.33□□□□□ -1.4
VPS50-213ENST00000477572 ENPP1P22413 925 aa6.33□□□□□ -1.4
VPS50-213ENST00000477572 SESN3P58005 492 aa6.33□□□□□ -1.4
VPS50-213ENST00000477572 RNASE9P60153 205 aaKnown RBP6.33□□□□□ -1.4
VPS50-213ENST00000477572 CT47A1Q5JQC4 288 aaPredicted RBP6.33□□□□□ -1.4
VPS50-213ENST00000477572 MBNL2Q5VZF2 373 aaKnown RBP6.33□□□□□ -1.4
VPS50-213ENST00000477572 SYT12Q8IV01 421 aa6.33□□□□□ -1.4
VPS50-213ENST00000477572 REPS2Q8NFH8 660 aa6.33□□□□□ -1.4
VPS50-213ENST00000477572 CEP95Q96GE4 821 aa6.33□□□□□ -1.4
VPS50-213ENST00000477572 AGAP2Q99490 1192 aa6.33□□□□□ -1.4
VPS50-213ENST00000477572 PDCD2LQ9BRP1 358 aa6.33□□□□□ -1.4
VPS50-213ENST00000477572 CAAP1Q9H8G2 361 aa6.33□□□□□ -1.4
VPS50-213ENST00000477572 GPRC5DQ9NZD1 345 aa6.33□□□□□ -1.4
VPS50-213ENST00000477572 POGKQ9P215 609 aa6.33□□□□□ -1.4
VPS50-213ENST00000477572 LPXNO60711 386 aa6.32□□□□□ -1.4
VPS50-213ENST00000477572 ULK1O75385 1050 aa6.32□□□□□ -1.4
VPS50-213ENST00000477572 NHLH2Q02577 135 aa6.32□□□□□ -1.4
VPS50-213ENST00000477572 TIGD2Q4W5G0 525 aa6.32□□□□□ -1.4
VPS50-213ENST00000477572 MFSD14BQ5SR56 506 aa6.32□□□□□ -1.4
VPS50-213ENST00000477572 PRAMEF14Q5SWL7 426 aa6.32□□□□□ -1.4
VPS50-213ENST00000477572 SDE2Q6IQ49 451 aa6.32□□□□□ -1.4
VPS50-213ENST00000477572 KCNV1Q6PIU1 500 aa6.32□□□□□ -1.4
VPS50-213ENST00000477572 LHFPL2Q6ZUX7 228 aa6.32□□□□□ -1.4
VPS50-213ENST00000477572 DOK3Q7L591 496 aa6.32□□□□□ -1.4
VPS50-213ENST00000477572 OR10H5Q8NGA6 315 aa6.32□□□□□ -1.4
VPS50-213ENST00000477572 CHAC2Q8WUX2 184 aa6.32□□□□□ -1.4
VPS50-213ENST00000477572 LENG9Q96B70 501 aa6.32□□□□□ -1.4
VPS50-213ENST00000477572 FZD1Q9UP38 647 aa6.32□□□□□ -1.4
VPS50-213ENST00000477572 TMA7Q9Y2S6 64 aaKnown RBP6.32□□□□□ -1.4
VPS50-213ENST00000477572 TRIM24O15164 1050 aa6.31□□□□□ -1.4
VPS50-213ENST00000477572 FOXN1O15353 648 aa6.31□□□□□ -1.4
VPS50-213ENST00000477572 AKR1B10O60218 316 aa6.31□□□□□ -1.4
VPS50-213ENST00000477572 NCR1O76036 304 aa6.31□□□□□ -1.4
VPS50-213ENST00000477572 ABHD16AO95870 558 aa6.31□□□□□ -1.4
VPS50-213ENST00000477572 ITGB1P05556 798 aa6.31□□□□□ -1.4
VPS50-213ENST00000477572 PTPN7P35236 360 aa6.31□□□□□ -1.4
VPS50-213ENST00000477572 SOX5P35711 763 aa6.31□□□□□ -1.4
VPS50-213ENST00000477572 MASP1P48740 699 aa6.31□□□□□ -1.4
VPS50-213ENST00000477572 TMPRSS15P98073 1019 aa6.31□□□□□ -1.4
VPS50-213ENST00000477572 C19orf54Q5BKX5 351 aa6.31□□□□□ -1.4
VPS50-213ENST00000477572 IQSEC1Q6DN90 963 aa6.31□□□□□ -1.4
VPS50-213ENST00000477572 RHOUQ7L0Q8 258 aa6.31□□□□□ -1.4
VPS50-213ENST00000477572 GPRIN1Q7Z2K8 1008 aa6.31□□□□□ -1.4
VPS50-213ENST00000477572 RIN2Q8WYP3 895 aaPredicted RBP6.31□□□□□ -1.4
VPS50-213ENST00000477572 TFAP2CQ92754 450 aa6.31□□□□□ -1.4
VPS50-213ENST00000477572 PHACTR3Q96KR7 559 aa6.31□□□□□ -1.4
VPS50-213ENST00000477572 ACAP3Q96P50 834 aa6.31□□□□□ -1.4
VPS50-213ENST00000477572 ANKFY1Q9P2R3 1169 aa6.31□□□□□ -1.4
VPS50-213ENST00000477572 APOBEC2Q9Y235 224 aaKnown RBP6.31□□□□□ -1.4
VPS50-213ENST00000477572 ZNF185O15231 689 aa6.3□□□□□ -1.4
VPS50-213ENST00000477572 NDUFA10O95299 355 aa6.3□□□□□ -1.4
VPS50-213ENST00000477572 LAG3P18627 525 aa6.3□□□□□ -1.4
VPS50-213ENST00000477572 HSD3B2P26439 372 aa6.3□□□□□ -1.4
VPS50-213ENST00000477572 INHBEP58166 350 aa6.3□□□□□ -1.4
VPS50-213ENST00000477572 MEF2AQ02078 507 aaPredicted RBP6.3□□□□□ -1.4
VPS50-213ENST00000477572 STAT4Q14765 748 aa6.3□□□□□ -1.4
VPS50-213ENST00000477572 PTPAQ15257 358 aa6.3□□□□□ -1.4
VPS50-213ENST00000477572 SMN1Q16637 294 aaKnown RBP6.3□□□□□ -1.4
VPS50-213ENST00000477572 KRTAP15-1Q3LI76 137 aa6.3□□□□□ -1.4
VPS50-213ENST00000477572 LY6G5CQ5SRR4 150 aa6.3□□□□□ -1.4
VPS50-213ENST00000477572 EFCAB12Q6NXP0 572 aa6.3□□□□□ -1.4
VPS50-213ENST00000477572 PCSK4Q6UW60 755 aa6.3□□□□□ -1.4
VPS50-213ENST00000477572 LRRC55Q6ZSA7 311 aa6.3□□□□□ -1.4
VPS50-213ENST00000477572 GDF7Q7Z4P5 450 aa6.3□□□□□ -1.4
VPS50-213ENST00000477572 GPR150Q8NGU9 434 aa6.3□□□□□ -1.4
VPS50-213ENST00000477572 SLC35B2Q8TB61 432 aa6.3□□□□□ -1.4
VPS50-213ENST00000477572 TSPEARQ8WU66 669 aa6.3□□□□□ -1.4
VPS50-213ENST00000477572 ZNF480Q8WV37 535 aa6.3□□□□□ -1.4
VPS50-213ENST00000477572 PRRX2Q99811 253 aa6.3□□□□□ -1.4
VPS50-213ENST00000477572 RPTORQ8N122 1335 aa6.29□□□□□ -1.4
VPS50-213ENST00000477572 CENPVL1A0A0U1RR11 272 aa6.29□□□□□ -1.4
VPS50-213ENST00000477572 TMEM191CA6NGB0 347 aa6.29□□□□□ -1.4
VPS50-213ENST00000477572 TBKBP1A7MCY6 615 aa6.29□□□□□ -1.4
VPS50-213ENST00000477572 WNT10BO00744 389 aa6.29□□□□□ -1.4
VPS50-213ENST00000477572 TOR2AQ5JU69 321 aa6.29□□□□□ -1.4
VPS50-213ENST00000477572 METTL24Q5JXM2 366 aa6.29□□□□□ -1.4
VPS50-213ENST00000477572 BTNL9Q6UXG8 535 aa6.29□□□□□ -1.4
VPS50-213ENST00000477572 RAX2Q96IS3 184 aa6.29□□□□□ -1.4
VPS50-213ENST00000477572 AKIP1Q9NQ31 210 aa6.29□□□□□ -1.4
VPS50-213ENST00000477572 DMRT3Q9NQL9 472 aa6.29□□□□□ -1.4
VPS50-213ENST00000477572 C14orf119Q9NWQ9 140 aa6.29□□□□□ -1.4
VPS50-213ENST00000477572 B5MCH6 92 aa6.28□□□□□ -1.4
VPS50-213ENST00000477572 CNGA1P29973 690 aa6.28□□□□□ -1.4
VPS50-213ENST00000477572 SRSF2Q01130 221 aaKnown RBP6.28□□□□□ -1.4
VPS50-213ENST00000477572 PDCD4Q53EL6 469 aaKnown RBP6.28□□□□□ -1.4
VPS50-213ENST00000477572 AFAP1L2Q8N4X5 818 aa6.28□□□□□ -1.4
VPS50-213ENST00000477572 COG1Q8WTW3 980 aa6.28□□□□□ -1.4
VPS50-213ENST00000477572 LMBR1Q8WVP7 490 aa6.28□□□□□ -1.4
VPS50-213ENST00000477572 STON2Q8WXE9 905 aa6.28□□□□□ -1.4
VPS50-213ENST00000477572 ZG16BQ96DA0 208 aa6.28□□□□□ -1.4
VPS50-213ENST00000477572 SLC46A2Q9BY10 475 aa6.28□□□□□ -1.4
VPS50-213ENST00000477572 LDAHQ9H6V9 325 aa6.28□□□□□ -1.4
VPS50-213ENST00000477572 MAP3K2Q9Y2U5 619 aa6.28□□□□□ -1.4
VPS50-213ENST00000477572 HS3ST4Q9Y661 456 aa6.28□□□□□ -1.4
VPS50-213ENST00000477572 UNC119BA6NIH7 251 aa6.27□□□□□ -1.41
VPS50-213ENST00000477572 GASTP01350 101 aa6.27□□□□□ -1.41
VPS50-213ENST00000477572 GCP02774 474 aa6.27□□□□□ -1.41
VPS50-213ENST00000477572 RAP2BP61225 183 aa6.27□□□□□ -1.41
VPS50-213ENST00000477572 BMT2Q1RMZ1 405 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms