RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 ARL4AP40617 200 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 RGS3P49796 1198 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 RBM5P52756 815 aaKnown RBP eCLIP6.25□□□□□ -1.41
VPS45-207ENST00000477558 ERVFRD-1P60508 538 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 LSAMPQ13449 338 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 C21orf62-AS1Q17RA5 79 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 PRAMEF18Q5VWM3 479 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 RSPO2Q6UXX9 243 aaPredicted RBP6.25□□□□□ -1.41
VPS45-207ENST00000477558 LBX2Q6XYB7 198 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 ZFPM1Q8IX07 1006 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 IFNL3Q8IZI9 196 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 MAGEB6Q8N7X4 407 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.25□□□□□ -1.41
VPS45-207ENST00000477558 CLUHP3Q96NS8 147 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 DIRC2Q96SL1 478 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 OSBPL5Q9H0X9 879 aaPredicted RBP6.25□□□□□ -1.41
VPS45-207ENST00000477558 SLC6A17Q9H1V8 727 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 CDIP1Q9H305 208 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 VEZTQ9HBM0 779 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 NCOA5Q9HCD5 579 aaKnown RBP6.25□□□□□ -1.41
VPS45-207ENST00000477558 TNFRSF12AQ9NP84 129 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 USP40Q9NVE5 1235 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 NDOR1Q9UHB4 597 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 ZNF112Q9UJU3 913 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 ZNF532Q9HCE3 1301 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 CENPFP49454 3210 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 CCDC163A0A0D9SF12 145 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 ZC3H12DA2A288 527 aaKnown RBP6.25□□□□□ -1.41
VPS45-207ENST00000477558 DDTLA6NHG4 134 aaPredicted RBP6.25□□□□□ -1.41
VPS45-207ENST00000477558 NUDT19A8MXV4 375 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 TCP10L2B9ZVM9 353 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 FOXP2O15409 715 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 NTRK1P04629 796 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 DBHP09172 617 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 GLI4P10075 376 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 GPR85P60893 370 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 GABREP78334 506 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 MLANAQ16655 118 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 SUPT20HL1Q3ZLR7 823 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 SLC9C2Q5TAH2 1124 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 ERICH6BQ5W0A0 696 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 MOB2Q70IA6 237 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 RASAL3Q86YV0 1011 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 POU5F2Q8N7G0 328 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 SH3RF3Q8TEJ3 882 aaPredicted RBP6.25□□□□□ -1.41
VPS45-207ENST00000477558 TRMT2BQ96GJ1 504 aaKnown RBP6.25□□□□□ -1.41
VPS45-207ENST00000477558 JAM3Q9BX67 310 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 CLDND1Q9NY35 253 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 AATFQ9NY61 560 aaKnown RBP eCLIP6.25□□□□□ -1.41
VPS45-207ENST00000477558 TMOD2Q9NZR1 351 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 KLHL14Q9P2G3 628 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 PCDHA9Q9Y5H5 950 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 PCDHA8Q9Y5H6 950 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 HCFC2Q9Y5Z7 792 aa6.25□□□□□ -1.41
VPS45-207ENST00000477558 ROBO3Q96MS0 1386 aa6.24□□□□□ -1.41
VPS45-207ENST00000477558 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.24□□□□□ -1.41
VPS45-207ENST00000477558 OR14I1A6ND48 311 aa6.24□□□□□ -1.41
VPS45-207ENST00000477558 LRRC10BA6NIK2 292 aa6.24□□□□□ -1.41
VPS45-207ENST00000477558 BAG3O95817 575 aa6.24□□□□□ -1.41
VPS45-207ENST00000477558 MPOP05164 745 aa6.24□□□□□ -1.41
VPS45-207ENST00000477558 ZFYP08048 801 aaPredicted RBP6.24□□□□□ -1.41
VPS45-207ENST00000477558 GSPT1P15170 499 aaKnown RBP6.24□□□□□ -1.41
VPS45-207ENST00000477558 NF2P35240 595 aa6.24□□□□□ -1.41
VPS45-207ENST00000477558 HUNKP57058 714 aa6.24□□□□□ -1.41
VPS45-207ENST00000477558 DYNLL1P63167 89 aaKnown RBP6.24□□□□□ -1.41
VPS45-207ENST00000477558 GABPAQ06546 454 aa6.24□□□□□ -1.41
VPS45-207ENST00000477558 RAB3GAP1Q15042 981 aa6.24□□□□□ -1.41
VPS45-207ENST00000477558 DEFB115Q30KQ5 88 aa6.24□□□□□ -1.41
VPS45-207ENST00000477558 TKFCQ3LXA3 575 aa6.24□□□□□ -1.41
VPS45-207ENST00000477558 RGMBQ6NW40 437 aa6.24□□□□□ -1.41
VPS45-207ENST00000477558 CENPQQ7L2Z9 268 aaPredicted RBP6.24□□□□□ -1.41
VPS45-207ENST00000477558 MAMDC2Q7Z304 686 aaPredicted RBP6.24□□□□□ -1.41
VPS45-207ENST00000477558 ZNF605Q86T29 641 aa6.24□□□□□ -1.41
VPS45-207ENST00000477558 HOMER1Q86YM7 354 aa6.24□□□□□ -1.41
VPS45-207ENST00000477558 TEX11Q8IYF3 940 aa6.24□□□□□ -1.41
VPS45-207ENST00000477558 LCORLQ8N3X6 602 aa6.24□□□□□ -1.41
VPS45-207ENST00000477558 C2orf69Q8N8R5 385 aa6.24□□□□□ -1.41
VPS45-207ENST00000477558 MIGA1Q8NAN2 632 aa6.24□□□□□ -1.41
VPS45-207ENST00000477558 APPBP2Q92624 585 aa6.24□□□□□ -1.41
VPS45-207ENST00000477558 TMEM169Q96HH4 297 aa6.24□□□□□ -1.41
VPS45-207ENST00000477558 ZFYVE21Q9BQ24 234 aa6.24□□□□□ -1.41
VPS45-207ENST00000477558 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.24□□□□□ -1.41
VPS45-207ENST00000477558 NSUN3Q9H649 340 aaKnown RBP6.24□□□□□ -1.41
VPS45-207ENST00000477558 ZNF552Q9H707 407 aaPredicted RBP6.24□□□□□ -1.41
VPS45-207ENST00000477558 DNAJC18Q9H819 358 aa6.24□□□□□ -1.41
VPS45-207ENST00000477558 SIT1Q9Y3P8 196 aa6.24□□□□□ -1.41
VPS45-207ENST00000477558 RNF113AO15541 343 aaKnown RBP6.23□□□□□ -1.41
VPS45-207ENST00000477558 CRTAMO95727 393 aa6.23□□□□□ -1.41
VPS45-207ENST00000477558 CENPBP07199 599 aaPredicted RBP6.23□□□□□ -1.41
VPS45-207ENST00000477558 C8AP07357 584 aa6.23□□□□□ -1.41
VPS45-207ENST00000477558 ZBTB48P10074 688 aaPredicted RBP6.23□□□□□ -1.41
VPS45-207ENST00000477558 MAP2K2P36507 400 aa6.23□□□□□ -1.41
VPS45-207ENST00000477558 GTF2A2P52657 109 aa6.23□□□□□ -1.41
VPS45-207ENST00000477558 TCP10Q12799 353 aa6.23□□□□□ -1.41
VPS45-207ENST00000477558 VGLL4Q14135 290 aa6.23□□□□□ -1.41
VPS45-207ENST00000477558 TTC22Q5TAA0 569 aa6.23□□□□□ -1.41
VPS45-207ENST00000477558 ZSCAN25Q6NSZ9 544 aa6.23□□□□□ -1.41
VPS45-207ENST00000477558 CYP4F22Q6NT55 531 aa6.23□□□□□ -1.41
VPS45-207ENST00000477558 RPTNQ6XPR3 784 aa6.23□□□□□ -1.41
VPS45-207ENST00000477558 FGD2Q7Z6J4 655 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms