RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 OTOP2Q7RTS6 562 aa16.77■□□□□ 0.28
SEC13-215ENST00000477547 APBB1IPQ7Z5R6 666 aaPredicted RBP16.77■□□□□ 0.28
SEC13-215ENST00000477547 GUF1Q8N442 669 aaKnown RBP16.77■□□□□ 0.28
SEC13-215ENST00000477547 TRIM6Q9C030 488 aaPredicted RBP16.77■□□□□ 0.28
SEC13-215ENST00000477547 GBP3Q9H0R5 595 aa16.77■□□□□ 0.28
SEC13-215ENST00000477547 CDT1Q9H211 546 aa16.77■□□□□ 0.28
SEC13-215ENST00000477547 TSPYL2Q9H2G4 693 aaPredicted RBP16.77■□□□□ 0.28
SEC13-215ENST00000477547 C1orf112Q9NSG2 853 aa16.77■□□□□ 0.28
SEC13-215ENST00000477547 A0A1B0GUA9 196 aa16.76■□□□□ 0.27
SEC13-215ENST00000477547 ABHD14A-ACY1A0A1B0GW23 586 aa16.76■□□□□ 0.27
SEC13-215ENST00000477547 FGBP02675 491 aa16.76■□□□□ 0.27
SEC13-215ENST00000477547 PROZP22891 400 aa16.76■□□□□ 0.27
SEC13-215ENST00000477547 DNAJB2P25686 324 aa16.76■□□□□ 0.27
SEC13-215ENST00000477547 RAB27AP51159 221 aa16.76■□□□□ 0.27
SEC13-215ENST00000477547 WDR5P61964 334 aaKnown RBP16.76■□□□□ 0.27
SEC13-215ENST00000477547 KNOP1Q1ED39 458 aaKnown RBP16.76■□□□□ 0.27
SEC13-215ENST00000477547 DCAF4L1Q3SXM0 396 aa16.76■□□□□ 0.27
SEC13-215ENST00000477547 COBLL1Q53SF7 1204 aa16.76■□□□□ 0.27
SEC13-215ENST00000477547 UBXN11Q5T124 520 aa16.76■□□□□ 0.27
SEC13-215ENST00000477547 HS2ST1Q7LGA3 356 aa16.76■□□□□ 0.27
SEC13-215ENST00000477547 TCHPQ9BT92 498 aa16.76■□□□□ 0.27
SEC13-215ENST00000477547 EIF2AQ9BY44 585 aaKnown RBP16.76■□□□□ 0.27
SEC13-215ENST00000477547 MTIF3Q9H2K0 278 aaKnown RBP16.76■□□□□ 0.27
SEC13-215ENST00000477547 RGS18Q9NS28 235 aa16.76■□□□□ 0.27
SEC13-215ENST00000477547 FAM105AQ9NUU6 356 aa16.76■□□□□ 0.27
SEC13-215ENST00000477547 NLRC5Q86WI3 1866 aa16.76■□□□□ 0.27
SEC13-215ENST00000477547 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.75■□□□□ 0.27
SEC13-215ENST00000477547 ANKRD63C9JTQ0 380 aa16.75■□□□□ 0.27
SEC13-215ENST00000477547 ABLIM1O14639 778 aa16.75■□□□□ 0.27
SEC13-215ENST00000477547 PSMA7O14818 248 aa16.75■□□□□ 0.27
SEC13-215ENST00000477547 PLA2G5P39877 138 aa16.75■□□□□ 0.27
SEC13-215ENST00000477547 PPP1R2P41236 205 aa16.75■□□□□ 0.27
SEC13-215ENST00000477547 PRCPP42785 496 aa16.75■□□□□ 0.27
SEC13-215ENST00000477547 KCNJ6P48051 423 aa16.75■□□□□ 0.27
SEC13-215ENST00000477547 DPCR1Q3MIW9 517 aa16.75■□□□□ 0.27
SEC13-215ENST00000477547 KLHL10Q6JEL2 608 aa16.75■□□□□ 0.27
SEC13-215ENST00000477547 ARMCX5Q6P1M9 558 aa16.75■□□□□ 0.27
SEC13-215ENST00000477547 SASS6Q6UVJ0 657 aa16.75■□□□□ 0.27
SEC13-215ENST00000477547 ZBTB33Q86T24 672 aa16.75■□□□□ 0.27
SEC13-215ENST00000477547 ZBTB45Q96K62 511 aaPredicted RBP16.75■□□□□ 0.27
SEC13-215ENST00000477547 TYW1Q9NV66 732 aaKnown RBP16.75■□□□□ 0.27
SEC13-215ENST00000477547 CTNND2Q9UQB3 1225 aa16.75■□□□□ 0.27
SEC13-215ENST00000477547 COL4A6Q14031 1691 aa16.75■□□□□ 0.27
SEC13-215ENST00000477547 C9IYK1 514 aa16.74■□□□□ 0.27
SEC13-215ENST00000477547 CLDN3O15551 220 aa16.74■□□□□ 0.27
SEC13-215ENST00000477547 MCF2P10911 925 aa16.74■□□□□ 0.27
SEC13-215ENST00000477547 CD44P16070 742 aaKnown RBP16.74■□□□□ 0.27
SEC13-215ENST00000477547 NLRP12P59046 1061 aa16.74■□□□□ 0.27
SEC13-215ENST00000477547 DEFB103AP81534 67 aa16.74■□□□□ 0.27
SEC13-215ENST00000477547 STX1AQ16623 288 aa16.74■□□□□ 0.27
SEC13-215ENST00000477547 SLC24A5Q71RS6 500 aa16.74■□□□□ 0.27
SEC13-215ENST00000477547 RTN4RL1Q86UN2 441 aaPredicted RBP16.74■□□□□ 0.27
SEC13-215ENST00000477547 ADSSL1Q8N142 457 aa16.74■□□□□ 0.27
SEC13-215ENST00000477547 POMGNT1Q8WZA1 660 aa16.74■□□□□ 0.27
SEC13-215ENST00000477547 HERVK_113Q902F9 699 aa16.74■□□□□ 0.27
SEC13-215ENST00000477547 MSTO1Q9BUK6 570 aa16.74■□□□□ 0.27
SEC13-215ENST00000477547 TRAIPQ9BWF2 469 aa16.74■□□□□ 0.27
SEC13-215ENST00000477547 KCTD10Q9H3F6 313 aa16.74■□□□□ 0.27
SEC13-215ENST00000477547 NXF3Q9H4D5 531 aaKnown RBP16.74■□□□□ 0.27
SEC13-215ENST00000477547 ZNF576Q9H609 170 aa16.74■□□□□ 0.27
SEC13-215ENST00000477547 PTPRHQ9HD43 1115 aa16.74■□□□□ 0.27
SEC13-215ENST00000477547 AGPAT3Q9NRZ7 376 aa16.74■□□□□ 0.27
SEC13-215ENST00000477547 PCDHB2Q9Y5E7 798 aa16.74■□□□□ 0.27
SEC13-215ENST00000477547 SYCE3A1L190 88 aa16.73■□□□□ 0.27
SEC13-215ENST00000477547 TGFB1I1O43294 461 aa16.73■□□□□ 0.27
SEC13-215ENST00000477547 AMHP03971 560 aa16.73■□□□□ 0.27
SEC13-215ENST00000477547 SKIP12755 728 aa16.73■□□□□ 0.27
SEC13-215ENST00000477547 MCL1Q07820 350 aa16.73■□□□□ 0.27
SEC13-215ENST00000477547 SLFN12LQ6IEE8 588 aa16.73■□□□□ 0.27
SEC13-215ENST00000477547 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.73■□□□□ 0.272e-23■■■■■ 54.1
SEC13-215ENST00000477547 ECHDC2Q86YB7 292 aa16.73■□□□□ 0.27
SEC13-215ENST00000477547 HACE1Q8IYU2 909 aa16.73■□□□□ 0.27
SEC13-215ENST00000477547 CEP120Q8N960 986 aa16.73■□□□□ 0.27
SEC13-215ENST00000477547 RNF169Q8NCN4 708 aa16.73■□□□□ 0.27
SEC13-215ENST00000477547 GOLGA5Q8TBA6 731 aa16.73■□□□□ 0.27
SEC13-215ENST00000477547 FAM122AQ96E09 287 aa16.73■□□□□ 0.27
SEC13-215ENST00000477547 CBWD1Q9BRT8 395 aa16.73■□□□□ 0.27
SEC13-215ENST00000477547 APOL6Q9BWW8 343 aa16.73■□□□□ 0.27
SEC13-215ENST00000477547 HAPLN2Q9GZV7 340 aa16.73■□□□□ 0.27
SEC13-215ENST00000477547 DACH1Q9UI36 760 aa16.73■□□□□ 0.27
SEC13-215ENST00000477547 IPPQ9Y573 584 aa16.73■□□□□ 0.27
SEC13-215ENST00000477547 A0A0B4J269 797 aa16.72■□□□□ 0.27
SEC13-215ENST00000477547 A0A0U1RQF3 1178 aa16.72■□□□□ 0.27
SEC13-215ENST00000477547 PDXKO00764 312 aa16.72■□□□□ 0.27
SEC13-215ENST00000477547 ENPP3O14638 875 aa16.72■□□□□ 0.27
SEC13-215ENST00000477547 CALUO43852 315 aaPredicted RBP16.72■□□□□ 0.27
SEC13-215ENST00000477547 LETM1O95202 739 aaPredicted RBP16.72■□□□□ 0.27
SEC13-215ENST00000477547 ATF7P17544 494 aaPredicted RBP16.72■□□□□ 0.27
SEC13-215ENST00000477547 GARTP22102 1010 aa16.72■□□□□ 0.27
SEC13-215ENST00000477547 TYRO3Q06418 890 aa16.72■□□□□ 0.27
SEC13-215ENST00000477547 PAK1Q13153 545 aa16.72■□□□□ 0.27
SEC13-215ENST00000477547 ZSCAN23Q3MJ62 389 aa16.72■□□□□ 0.27
SEC13-215ENST00000477547 MLKLQ8NB16 471 aa16.72■□□□□ 0.27
SEC13-215ENST00000477547 ADAMTS19Q8TE59 1207 aa16.72■□□□□ 0.27
SEC13-215ENST00000477547 NELFBQ8WX92 580 aa16.72■□□□□ 0.27
SEC13-215ENST00000477547 P2RX5Q93086 422 aa16.72■□□□□ 0.27
SEC13-215ENST00000477547 TSG101Q99816 390 aa16.72■□□□□ 0.27
SEC13-215ENST00000477547 CXXC1Q9P0U4 656 aaPredicted RBP16.72■□□□□ 0.27
SEC13-215ENST00000477547 CGNQ9P2M7 1197 aaKnown RBP16.72■□□□□ 0.27
SEC13-215ENST00000477547 LRFN2Q9ULH4 789 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 258.6 ms