RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 TRIM24O15164 1050 aa5.77□□□□□ -1.49
UBR3-209ENST00000477461 NCR1O76036 304 aa5.77□□□□□ -1.49
UBR3-209ENST00000477461 LGALS4P56470 323 aa5.77□□□□□ -1.49
UBR3-209ENST00000477461 CSRP2Q16527 193 aa5.77□□□□□ -1.49
UBR3-209ENST00000477461 PLEKHG4Q58EX7 1191 aa5.77□□□□□ -1.49
UBR3-209ENST00000477461 DPY19L2P1Q6NXN4 242 aa5.77□□□□□ -1.49
UBR3-209ENST00000477461 CDC5LQ99459 802 aaKnown RBP5.77□□□□□ -1.49
UBR3-209ENST00000477461 WDR11Q9BZH6 1224 aa5.77□□□□□ -1.49
UBR3-209ENST00000477461 EMC7Q9NPA0 242 aa5.77□□□□□ -1.49
UBR3-209ENST00000477461 POGKQ9P215 609 aa5.77□□□□□ -1.49
UBR3-209ENST00000477461 TBX22Q9Y458 520 aa5.77□□□□□ -1.49
UBR3-209ENST00000477461 HS3ST4Q9Y661 456 aa5.77□□□□□ -1.49
UBR3-209ENST00000477461 CFTRP13569 1480 aa5.77□□□□□ -1.49
UBR3-209ENST00000477461 ZNF185O15231 689 aa5.76□□□□□ -1.49
UBR3-209ENST00000477461 GPR15P49685 360 aa5.76□□□□□ -1.49
UBR3-209ENST00000477461 NHLH2Q02577 135 aa5.76□□□□□ -1.49
UBR3-209ENST00000477461 ATP13A4Q4VNC1 1196 aa5.76□□□□□ -1.49
UBR3-209ENST00000477461 PITRM1Q5JRX3 1037 aa5.76□□□□□ -1.49
UBR3-209ENST00000477461 GDF7Q7Z4P5 450 aa5.76□□□□□ -1.49
UBR3-209ENST00000477461 JAZF1Q86VZ6 243 aa5.76□□□□□ -1.49
UBR3-209ENST00000477461 SYT12Q8IV01 421 aa5.76□□□□□ -1.49
UBR3-209ENST00000477461 GLB1L2Q8IW92 636 aa5.76□□□□□ -1.49
UBR3-209ENST00000477461 RNF169Q8NCN4 708 aa5.76□□□□□ -1.49
UBR3-209ENST00000477461 BEND2Q8NDZ0 799 aa5.76□□□□□ -1.49
UBR3-209ENST00000477461 SLC5A5Q92911 643 aa5.76□□□□□ -1.49
UBR3-209ENST00000477461 EAF2Q96CJ1 260 aaPredicted RBP5.76□□□□□ -1.49
UBR3-209ENST00000477461 MFSD3Q96ES6 412 aa5.76□□□□□ -1.49
UBR3-209ENST00000477461 PHACTR3Q96KR7 559 aa5.76□□□□□ -1.49
UBR3-209ENST00000477461 PDCD2LQ9BRP1 358 aa5.76□□□□□ -1.49
UBR3-209ENST00000477461 CYP4F11Q9HBI6 524 aa5.76□□□□□ -1.49
UBR3-209ENST00000477461 AKIP1Q9NQ31 210 aa5.76□□□□□ -1.49
UBR3-209ENST00000477461 ZNHIT2Q9UHR6 403 aa5.76□□□□□ -1.49
UBR3-209ENST00000477461 PACSIN3Q9UKS6 424 aa5.76□□□□□ -1.49
UBR3-209ENST00000477461 MAP3K2Q9Y2U5 619 aa5.76□□□□□ -1.49
UBR3-209ENST00000477461 PCSK5Q92824 1860 aa5.76□□□□□ -1.49
UBR3-209ENST00000477461 NESP48681 1621 aa5.76□□□□□ -1.49
UBR3-209ENST00000477461 TLDC2A0PJX2 215 aa5.75□□□□□ -1.49
UBR3-209ENST00000477461 UNC119BA6NIH7 251 aa5.75□□□□□ -1.49
UBR3-209ENST00000477461 ENPP3O14638 875 aa5.75□□□□□ -1.49
UBR3-209ENST00000477461 LTA4HP09960 611 aaKnown RBP5.75□□□□□ -1.49
UBR3-209ENST00000477461 MYCLP1P12525 358 aaPredicted RBP5.75□□□□□ -1.49
UBR3-209ENST00000477461 ID4P47928 161 aa5.75□□□□□ -1.49
UBR3-209ENST00000477461 WNT3AP56704 352 aa5.75□□□□□ -1.49
UBR3-209ENST00000477461 PDCD1Q15116 288 aa5.75□□□□□ -1.49
UBR3-209ENST00000477461 METTL24Q5JXM2 366 aa5.75□□□□□ -1.49
UBR3-209ENST00000477461 HECTD2Q5U5R9 776 aa5.75□□□□□ -1.49
UBR3-209ENST00000477461 DOK3Q7L591 496 aa5.75□□□□□ -1.49
UBR3-209ENST00000477461 SLC41A1Q8IVJ1 513 aa5.75□□□□□ -1.49
UBR3-209ENST00000477461 OR14C36Q8NHC7 312 aa5.75□□□□□ -1.49
UBR3-209ENST00000477461 KCTD10Q9H3F6 313 aa5.75□□□□□ -1.49
UBR3-209ENST00000477461 RIOX1Q9H6W3 641 aa5.75□□□□□ -1.49
UBR3-209ENST00000477461 PDS5BQ9NTI5 1447 aa5.74□□□□□ -1.49
UBR3-209ENST00000477461 GRID2IPA4D2P6 1211 aa5.74□□□□□ -1.49
UBR3-209ENST00000477461 B3GALT2O43825 422 aa5.74□□□□□ -1.49
UBR3-209ENST00000477461 TMEM127O75204 238 aa5.74□□□□□ -1.49
UBR3-209ENST00000477461 ITGA10O75578 1167 aa5.74□□□□□ -1.49
UBR3-209ENST00000477461 RHOBTB3O94955 611 aa5.74□□□□□ -1.49
UBR3-209ENST00000477461 CCDC178Q5BJE1 867 aa5.74□□□□□ -1.49
UBR3-209ENST00000477461 IQSEC1Q6DN90 963 aa5.74□□□□□ -1.49
UBR3-209ENST00000477461 EFCAB12Q6NXP0 572 aa5.74□□□□□ -1.49
UBR3-209ENST00000477461 GPRIN1Q7Z2K8 1008 aa5.74□□□□□ -1.49
UBR3-209ENST00000477461 CMTR2Q8IYT2 770 aaKnown RBP5.74□□□□□ -1.49
UBR3-209ENST00000477461 FBXO18Q8NFZ0 1043 aa5.74□□□□□ -1.49
UBR3-209ENST00000477461 OR10H5Q8NGA6 315 aa5.74□□□□□ -1.49
UBR3-209ENST00000477461 MYEOVQ96EZ4 313 aa5.74□□□□□ -1.49
UBR3-209ENST00000477461 CEP95Q96GE4 821 aa5.74□□□□□ -1.49
UBR3-209ENST00000477461 DCLRE1CQ96SD1 692 aaKnown RBP5.74□□□□□ -1.49
UBR3-209ENST00000477461 FEZ1Q99689 392 aa5.74□□□□□ -1.49
UBR3-209ENST00000477461 SLC46A2Q9BY10 475 aa5.74□□□□□ -1.49
UBR3-209ENST00000477461 SERHL2Q9H4I8 314 aa5.74□□□□□ -1.49
UBR3-209ENST00000477461 ERCC6Q03468 1493 aa5.73□□□□□ -1.49
UBR3-209ENST00000477461 TBKBP1A7MCY6 615 aa5.73□□□□□ -1.49
UBR3-209ENST00000477461 GSG1L2A8MUP6 293 aa5.73□□□□□ -1.49
UBR3-209ENST00000477461 RNASET2O00584 256 aaKnown RBP5.73□□□□□ -1.49
UBR3-209ENST00000477461 CTSSP25774 331 aa5.73□□□□□ -1.49
UBR3-209ENST00000477461 ADSLP30566 484 aaPredicted RBP5.73□□□□□ -1.49
UBR3-209ENST00000477461 ZEB1P37275 1124 aaPredicted RBP5.73□□□□□ -1.49
UBR3-209ENST00000477461 CCT2P78371 535 aaKnown RBP5.73□□□□□ -1.49
UBR3-209ENST00000477461 CDK17Q00537 523 aa5.73□□□□□ -1.49
UBR3-209ENST00000477461 PDCD4Q53EL6 469 aaKnown RBP5.73□□□□□ -1.49
UBR3-209ENST00000477461 MFSD14BQ5SR56 506 aa5.73□□□□□ -1.49
UBR3-209ENST00000477461 GIMAP6Q6P9H5 292 aa5.73□□□□□ -1.49
UBR3-209ENST00000477461 HDGFL2Q7Z4V5 671 aaPredicted RBP5.73□□□□□ -1.49
UBR3-209ENST00000477461 RASSF3Q86WH2 238 aa5.73□□□□□ -1.49
UBR3-209ENST00000477461 LCORLQ8N3X6 602 aa5.73□□□□□ -1.49
UBR3-209ENST00000477461 UBR7Q8N806 425 aa5.73□□□□□ -1.49
UBR3-209ENST00000477461 REPS2Q8NFH8 660 aa5.73□□□□□ -1.49
UBR3-209ENST00000477461 SNX33Q8WV41 574 aa5.73□□□□□ -1.49
UBR3-209ENST00000477461 TFAP2CQ92754 450 aa5.73□□□□□ -1.49
UBR3-209ENST00000477461 TOPORSQ9NS56 1045 aaPredicted RBP5.73□□□□□ -1.49
UBR3-209ENST00000477461 PLAAQ9Y263 795 aa5.73□□□□□ -1.49
UBR3-209ENST00000477461 CDY2AQ9Y6F7 541 aa5.73□□□□□ -1.49
UBR3-209ENST00000477461 FANCD2Q9BXW9 1451 aa5.72□□□□□ -1.49
UBR3-209ENST00000477461 A0A087X0B3 334 aa5.72□□□□□ -1.49
UBR3-209ENST00000477461 ADCY6O43306 1168 aa5.72□□□□□ -1.49
UBR3-209ENST00000477461 PDE8AO60658 829 aa5.72□□□□□ -1.49
UBR3-209ENST00000477461 LMNAP02545 664 aaKnown RBP5.72□□□□□ -1.49
UBR3-209ENST00000477461 ADRA1BP35368 520 aa5.72□□□□□ -1.49
UBR3-209ENST00000477461 UGT8Q16880 541 aa5.72□□□□□ -1.49
UBR3-209ENST00000477461 OLFML1Q6UWY5 402 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms