RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 OR1G1P47890 313 aa10.95□□□□□ -0.66
COL4A5-204ENST00000477429 SCNN1GP51170 649 aa10.95□□□□□ -0.66
COL4A5-204ENST00000477429 JAK3P52333 1124 aa10.95□□□□□ -0.66
COL4A5-204ENST00000477429 DSG1Q02413 1049 aa10.95□□□□□ -0.66
COL4A5-204ENST00000477429 SNW1Q13573 536 aaKnown RBP10.95□□□□□ -0.66
COL4A5-204ENST00000477429 NPY5RQ15761 445 aa10.95□□□□□ -0.66
COL4A5-204ENST00000477429 DCLRE1AQ6PJP8 1040 aa10.95□□□□□ -0.66
COL4A5-204ENST00000477429 PRSS55Q6UWB4 352 aaPredicted RBP10.95□□□□□ -0.66
COL4A5-204ENST00000477429 ZNF410Q86VK4 478 aa10.95□□□□□ -0.66
COL4A5-204ENST00000477429 ETNPPLQ8TBG4 499 aa10.95□□□□□ -0.66
COL4A5-204ENST00000477429 PRPF31Q8WWY3 499 aaKnown RBP10.95□□□□□ -0.66
COL4A5-204ENST00000477429 RUBCNQ92622 972 aa10.95□□□□□ -0.66
COL4A5-204ENST00000477429 CPB2Q96IY4 423 aa10.95□□□□□ -0.66
COL4A5-204ENST00000477429 PAAF1Q9BRP4 392 aa10.95□□□□□ -0.66
COL4A5-204ENST00000477429 TMEM175Q9BSA9 504 aa10.95□□□□□ -0.66
COL4A5-204ENST00000477429 GLT8D2Q9H1C3 349 aa10.95□□□□□ -0.66
COL4A5-204ENST00000477429 SEMA4AQ9H3S1 761 aa10.95□□□□□ -0.66
COL4A5-204ENST00000477429 C6orf50Q9HD87 102 aa10.95□□□□□ -0.66
COL4A5-204ENST00000477429 SLC2A4RGQ9NR83 387 aa10.95□□□□□ -0.66
COL4A5-204ENST00000477429 CHST7Q9NS84 486 aa10.95□□□□□ -0.66
COL4A5-204ENST00000477429 TCEAL9Q9UHQ7 104 aa10.95□□□□□ -0.66
COL4A5-204ENST00000477429 IPPQ9Y573 584 aa10.95□□□□□ -0.66
COL4A5-204ENST00000477429 ZNF462Q96JM2 2506 aa10.94□□□□□ -0.66
COL4A5-204ENST00000477429 ARL5CA6NH57 179 aa10.94□□□□□ -0.66
COL4A5-204ENST00000477429 ADAM12O43184 909 aa10.94□□□□□ -0.66
COL4A5-204ENST00000477429 SLC37A4O43826 429 aa10.94□□□□□ -0.66
COL4A5-204ENST00000477429 SFNP31947 248 aa10.94□□□□□ -0.66
COL4A5-204ENST00000477429 GLUD2P49448 558 aa10.94□□□□□ -0.66
COL4A5-204ENST00000477429 RAB27AP51159 221 aa10.94□□□□□ -0.66
COL4A5-204ENST00000477429 STARD6P59095 220 aa10.94□□□□□ -0.66
COL4A5-204ENST00000477429 FZD5Q13467 585 aa10.94□□□□□ -0.66
COL4A5-204ENST00000477429 RTP2Q5QGT7 225 aa10.94□□□□□ -0.66
COL4A5-204ENST00000477429 TSSK4Q6SA08 328 aa10.94□□□□□ -0.66
COL4A5-204ENST00000477429 Q6ZUG5 572 aa10.94□□□□□ -0.66
COL4A5-204ENST00000477429 CDR2LQ86X02 465 aaPredicted RBP10.94□□□□□ -0.66
COL4A5-204ENST00000477429 ZNF710Q8N1W2 664 aa10.94□□□□□ -0.66
COL4A5-204ENST00000477429 ITFG1Q8TB96 612 aa10.94□□□□□ -0.66
COL4A5-204ENST00000477429 URGCPQ8TCY9 931 aa10.94□□□□□ -0.66
COL4A5-204ENST00000477429 TBCKQ8TEA7 893 aa10.94□□□□□ -0.66
COL4A5-204ENST00000477429 MBOAT7Q96N66 472 aa10.94□□□□□ -0.66
COL4A5-204ENST00000477429 AIFM3Q96NN9 605 aa10.94□□□□□ -0.66
COL4A5-204ENST00000477429 DDX23Q9BUQ8 820 aaKnown RBP10.94□□□□□ -0.66
COL4A5-204ENST00000477429 RHOBTB2Q9BYZ6 727 aa10.94□□□□□ -0.66
COL4A5-204ENST00000477429 NCOA5Q9HCD5 579 aaKnown RBP10.94□□□□□ -0.66
COL4A5-204ENST00000477429 PARD6AQ9NPB6 346 aa10.94□□□□□ -0.66
COL4A5-204ENST00000477429 ZMIZ1Q9ULJ6 1067 aa10.94□□□□□ -0.66
COL4A5-204ENST00000477429 COL4A3BPQ9Y5P4 624 aa10.94□□□□□ -0.66
COL4A5-204ENST00000477429 M0R2N6 131 aa10.93□□□□□ -0.66
COL4A5-204ENST00000477429 B4GALT5O43286 388 aa10.93□□□□□ -0.66
COL4A5-204ENST00000477429 GAS2O43903 313 aaKnown RBP10.93□□□□□ -0.66
COL4A5-204ENST00000477429 TSPAN1O60635 241 aa10.93□□□□□ -0.66
COL4A5-204ENST00000477429 ADH1AP07327 375 aa10.93□□□□□ -0.66
COL4A5-204ENST00000477429 PYGBP11216 843 aa10.93□□□□□ -0.66
COL4A5-204ENST00000477429 SKIP12755 728 aa10.93□□□□□ -0.66
COL4A5-204ENST00000477429 NCLP19338 710 aaKnown RBP10.93□□□□□ -0.66
COL4A5-204ENST00000477429 LAMTOR4Q0VGL1 99 aa10.93□□□□□ -0.66
COL4A5-204ENST00000477429 AMHR2Q16671 573 aa10.93□□□□□ -0.66
COL4A5-204ENST00000477429 TSGA10IPQ3SY00 556 aa10.93□□□□□ -0.66
COL4A5-204ENST00000477429 Q4G0T1 1027 aa10.93□□□□□ -0.66
COL4A5-204ENST00000477429 GRASPQ7Z6J2 395 aaPredicted RBP10.93□□□□□ -0.66
COL4A5-204ENST00000477429 BRF1Q92994 677 aa10.93□□□□□ -0.66
COL4A5-204ENST00000477429 PGBD4Q96DM1 585 aa10.93□□□□□ -0.66
COL4A5-204ENST00000477429 YTHDC1Q96MU7 727 aaKnown RBP10.93□□□□□ -0.66
COL4A5-204ENST00000477429 APOL6Q9BWW8 343 aa10.93□□□□□ -0.66
COL4A5-204ENST00000477429 PRKD2Q9BZL6 878 aa10.93□□□□□ -0.66
COL4A5-204ENST00000477429 PLA2G2FQ9BZM2 168 aa10.93□□□□□ -0.66
COL4A5-204ENST00000477429 NXF3Q9H4D5 531 aaKnown RBP10.93□□□□□ -0.66
COL4A5-204ENST00000477429 DHX33Q9H6R0 707 aaKnown RBP10.93□□□□□ -0.66
COL4A5-204ENST00000477429 XPNPEP1Q9NQW7 623 aa10.93□□□□□ -0.66
COL4A5-204ENST00000477429 HCFC1R1Q9NWW0 138 aa10.93□□□□□ -0.66
COL4A5-204ENST00000477429 VAV3Q9UKW4 847 aa10.93□□□□□ -0.66
COL4A5-204ENST00000477429 WDFY3Q8IZQ1 3526 aa10.93□□□□□ -0.66
COL4A5-204ENST00000477429 ANKRD17O75179 2603 aaKnown RBP10.92□□□□□ -0.66
COL4A5-204ENST00000477429 NID2Q14112 1375 aa10.92□□□□□ -0.66
COL4A5-204ENST00000477429 MYH15Q9Y2K3 1946 aa10.92□□□□□ -0.66
COL4A5-204ENST00000477429 CNTNAP2Q9UHC6 1331 aa10.92□□□□□ -0.66
COL4A5-204ENST00000477429 CYP3A7-CYP3A51PA0A087WV96 503 aa10.92□□□□□ -0.66
COL4A5-204ENST00000477429 PRR29P0C7W0 189 aa10.92□□□□□ -0.66
COL4A5-204ENST00000477429 ITGA4P13612 1032 aa10.92□□□□□ -0.66
COL4A5-204ENST00000477429 RFX1P22670 979 aa10.92□□□□□ -0.66
COL4A5-204ENST00000477429 CYP3A7P24462 503 aa10.92□□□□□ -0.66
COL4A5-204ENST00000477429 AKAP5P24588 427 aa10.92□□□□□ -0.66
COL4A5-204ENST00000477429 HOXC13P31276 330 aa10.92□□□□□ -0.66
COL4A5-204ENST00000477429 USP11P51784 963 aa10.92□□□□□ -0.66
COL4A5-204ENST00000477429 CSTF1Q05048 431 aaKnown RBP10.92□□□□□ -0.66
COL4A5-204ENST00000477429 VARS2Q5ST30 1063 aaKnown RBP10.92□□□□□ -0.66
COL4A5-204ENST00000477429 FAM193BQ96PV7 902 aaPredicted RBP10.92□□□□□ -0.66
COL4A5-204ENST00000477429 HNRNPABQ99729 332 aaKnown RBP10.92□□□□□ -0.66
COL4A5-204ENST00000477429 KXD1Q9BQD3 176 aa10.92□□□□□ -0.66
COL4A5-204ENST00000477429 SLC26A6Q9BXS9 759 aa10.92□□□□□ -0.66
COL4A5-204ENST00000477429 PIDD1Q9HB75 910 aa10.92□□□□□ -0.66
COL4A5-204ENST00000477429 KLK14Q9P0G3 267 aa10.92□□□□□ -0.66
COL4A5-204ENST00000477429 PATJQ8NI35 1801 aa10.92□□□□□ -0.66
COL4A5-204ENST00000477429 CNOT1A5YKK6 2376 aaKnown RBP10.92□□□□□ -0.66
COL4A5-204ENST00000477429 NOTCH4Q99466 2003 aa10.92□□□□□ -0.66
COL4A5-204ENST00000477429 PTPN13Q12923 2485 aa10.92□□□□□ -0.66
COL4A5-204ENST00000477429 A0A087WWV3 80 aa10.91□□□□□ -0.66
COL4A5-204ENST00000477429 KANSL1LA0AUZ9 987 aa10.91□□□□□ -0.66
COL4A5-204ENST00000477429 TTLL13PA6NNM8 815 aa10.91□□□□□ -0.66
COL4A5-204ENST00000477429 TAF4O00268 1085 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms