RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 CBWD3Q5JTY5 395 aa11.79□□□□□ -0.52
COL27A1-204ENST00000477421 CBWD5Q5RIA9 395 aa11.79□□□□□ -0.52
COL27A1-204ENST00000477421 OR6B2Q6IFH4 312 aa11.79□□□□□ -0.52
COL27A1-204ENST00000477421 HSPH1Q92598 858 aa11.79□□□□□ -0.52
COL27A1-204ENST00000477421 ANKRD36BP1Q96IX9 119 aa11.79□□□□□ -0.52
COL27A1-204ENST00000477421 TMEM117Q9H0C3 514 aa11.79□□□□□ -0.52
COL27A1-204ENST00000477421 HESX1Q9UBX0 185 aa11.79□□□□□ -0.52
COL27A1-204ENST00000477421 KDM3BQ7LBC6 1761 aa11.79□□□□□ -0.52
COL27A1-204ENST00000477421 MYH2Q9UKX2 1941 aa11.79□□□□□ -0.52
COL27A1-204ENST00000477421 EXOC1LA0A1B0GW35 172 aa11.79□□□□□ -0.52
COL27A1-204ENST00000477421 ICAM1P05362 532 aa11.79□□□□□ -0.52
COL27A1-204ENST00000477421 CCDC197Q8NCU1 140 aa11.79□□□□□ -0.52
COL27A1-204ENST00000477421 TAS1R2Q8TE23 839 aa11.79□□□□□ -0.52
COL27A1-204ENST00000477421 LPAR1Q92633 364 aa11.79□□□□□ -0.52
COL27A1-204ENST00000477421 ACSF2Q96CM8 615 aaPredicted RBP11.79□□□□□ -0.52
COL27A1-204ENST00000477421 IDI2Q9BXS1 227 aa11.79□□□□□ -0.52
COL27A1-204ENST00000477421 HACL1Q9UJ83 578 aa11.79□□□□□ -0.52
COL27A1-204ENST00000477421 WNT10BO00744 389 aa11.78□□□□□ -0.52
COL27A1-204ENST00000477421 ARSHQ5FYA8 562 aa11.78□□□□□ -0.52
COL27A1-204ENST00000477421 C9orf72Q96LT7 481 aa11.78□□□□□ -0.52
COL27A1-204ENST00000477421 TRIM7Q9C029 511 aa11.78□□□□□ -0.52
COL27A1-204ENST00000477421 KLHL14Q9P2G3 628 aa11.78□□□□□ -0.52
COL27A1-204ENST00000477421 RAB21Q9UL25 225 aa11.78□□□□□ -0.52
COL27A1-204ENST00000477421 F8VZ95 297 aa11.78□□□□□ -0.52
COL27A1-204ENST00000477421 GGPS1O95749 300 aa11.78□□□□□ -0.52
COL27A1-204ENST00000477421 SLC8A3P57103 927 aa11.78□□□□□ -0.52
COL27A1-204ENST00000477421 CDK17Q00537 523 aa11.78□□□□□ -0.52
COL27A1-204ENST00000477421 PPP6R3Q5H9R7 873 aaPredicted RBP11.78□□□□□ -0.52
COL27A1-204ENST00000477421 KIAA1755Q5JYT7 1200 aa11.78□□□□□ -0.52
COL27A1-204ENST00000477421 DPY19L2Q6NUT2 758 aa11.78□□□□□ -0.52
COL27A1-204ENST00000477421 PSPC1Q8WXF1 523 aaKnown RBP11.78□□□□□ -0.52
COL27A1-204ENST00000477421 ATG4AQ8WYN0 398 aa11.78□□□□□ -0.52
COL27A1-204ENST00000477421 BAP1Q92560 729 aa11.78□□□□□ -0.52
COL27A1-204ENST00000477421 SYN2Q92777 582 aaPredicted RBP11.78□□□□□ -0.52
COL27A1-204ENST00000477421 WDR18Q9BV38 432 aa11.78□□□□□ -0.52
COL27A1-204ENST00000477421 VIPAS39Q9H9C1 493 aa11.78□□□□□ -0.52
COL27A1-204ENST00000477421 KCNMB3Q9NPA1 279 aa11.78□□□□□ -0.52
COL27A1-204ENST00000477421 SAYSD1Q9NPB0 183 aa11.78□□□□□ -0.52
COL27A1-204ENST00000477421 F5H423 210 aaPredicted RBP11.78□□□□□ -0.52
COL27A1-204ENST00000477421 DDX3XO00571 662 aaKnown RBP eCLIP11.78□□□□□ -0.52
COL27A1-204ENST00000477421 PODXLO00592 558 aa11.78□□□□□ -0.52
COL27A1-204ENST00000477421 EIF3DO15371 548 aaKnown RBP eCLIP11.78□□□□□ -0.52
COL27A1-204ENST00000477421 RTN2O75298 545 aa11.78□□□□□ -0.52
COL27A1-204ENST00000477421 WEE2P0C1S8 567 aa11.78□□□□□ -0.52
COL27A1-204ENST00000477421 P4HA1P13674 534 aa11.78□□□□□ -0.52
COL27A1-204ENST00000477421 PSMA2P25787 234 aa11.78□□□□□ -0.52
COL27A1-204ENST00000477421 STAT5BP51692 787 aa11.78□□□□□ -0.52
COL27A1-204ENST00000477421 SLMAPQ14BN4 828 aa11.78□□□□□ -0.52
COL27A1-204ENST00000477421 MMS22LQ6ZRQ5 1243 aa11.78□□□□□ -0.52
COL27A1-204ENST00000477421 GMCL1P1Q8NEA9 526 aa11.78□□□□□ -0.52
COL27A1-204ENST00000477421 MDM1Q8TC05 714 aa11.78□□□□□ -0.52
COL27A1-204ENST00000477421 ARHGEF2Q92974 986 aaKnown RBP11.78□□□□□ -0.52
COL27A1-204ENST00000477421 SLITRK6Q9H5Y7 841 aa11.78□□□□□ -0.52
COL27A1-204ENST00000477421 SEPT10Q9P0V9 454 aa11.78□□□□□ -0.52
COL27A1-204ENST00000477421 DBR1Q9UK59 544 aaKnown RBP11.78□□□□□ -0.52
COL27A1-204ENST00000477421 LRRC37A3O60309 1634 aa11.78□□□□□ -0.52
COL27A1-204ENST00000477421 CSDE1O75534 798 aaKnown RBP11.77□□□□□ -0.52
COL27A1-204ENST00000477421 DGAT1O75907 488 aa11.77□□□□□ -0.52
COL27A1-204ENST00000477421 NPTX2P47972 431 aa11.77□□□□□ -0.52
COL27A1-204ENST00000477421 RARRES1P49788 294 aa11.77□□□□□ -0.52
COL27A1-204ENST00000477421 ZNF699Q32M78 642 aa11.77□□□□□ -0.52
COL27A1-204ENST00000477421 WDR72Q3MJ13 1102 aa11.77□□□□□ -0.52
COL27A1-204ENST00000477421 Q4G0T1 1027 aa11.77□□□□□ -0.52
COL27A1-204ENST00000477421 SLFN12LQ6IEE8 588 aa11.77□□□□□ -0.52
COL27A1-204ENST00000477421 HIBCHQ6NVY1 386 aaPredicted RBP11.77□□□□□ -0.52
COL27A1-204ENST00000477421 FOXR1Q6PIV2 292 aa11.77□□□□□ -0.52
COL27A1-204ENST00000477421 MOXD1Q6UVY6 613 aa11.77□□□□□ -0.52
COL27A1-204ENST00000477421 C15orf52Q6ZUT6 534 aaKnown RBP11.77□□□□□ -0.52
COL27A1-204ENST00000477421 SLC47A2Q86VL8 602 aa11.77□□□□□ -0.52
COL27A1-204ENST00000477421 KCTD6Q8NC69 237 aa11.77□□□□□ -0.52
COL27A1-204ENST00000477421 SYTL5Q8TDW5 730 aaPredicted RBP11.77□□□□□ -0.52
COL27A1-204ENST00000477421 MKNK1Q9BUB5 465 aa11.77□□□□□ -0.52
COL27A1-204ENST00000477421 A0A087WUV0 522 aaPredicted RBP11.77□□□□□ -0.52
COL27A1-204ENST00000477421 PHF20L1A8MW92 1017 aa11.77□□□□□ -0.52
COL27A1-204ENST00000477421 PPP1R37O75864 691 aa11.77□□□□□ -0.52
COL27A1-204ENST00000477421 SPATA31C1P0DKV0 1188 aa11.77□□□□□ -0.52
COL27A1-204ENST00000477421 VCAM1P19320 739 aa11.77□□□□□ -0.52
COL27A1-204ENST00000477421 CA4P22748 312 aa11.77□□□□□ -0.52
COL27A1-204ENST00000477421 YWHAEP62258 255 aaKnown RBP11.77□□□□□ -0.52
COL27A1-204ENST00000477421 DLG4P78352 724 aa11.77□□□□□ -0.52
COL27A1-204ENST00000477421 KRT17Q04695 432 aa11.77□□□□□ -0.52
COL27A1-204ENST00000477421 R3HDM1Q15032 1099 aaKnown RBP11.77□□□□□ -0.52
COL27A1-204ENST00000477421 TRADDQ15628 312 aa11.77□□□□□ -0.52
COL27A1-204ENST00000477421 JAMLQ86YT9 394 aa11.77□□□□□ -0.52
COL27A1-204ENST00000477421 IL31RAQ8NI17 732 aa11.77□□□□□ -0.52
COL27A1-204ENST00000477421 C18orf8Q96DM3 657 aa11.77□□□□□ -0.52
COL27A1-204ENST00000477421 TRIM11Q96F44 468 aa11.77□□□□□ -0.52
COL27A1-204ENST00000477421 RPF1Q9H9Y2 349 aaKnown RBP11.77□□□□□ -0.52
COL27A1-204ENST00000477421 PPP1R9AQ9ULJ8 1098 aa11.77□□□□□ -0.52
COL27A1-204ENST00000477421 TRAF3IP3Q9Y228 551 aa11.77□□□□□ -0.52
COL27A1-204ENST00000477421 TMEM253P0C7T8 217 aa11.77□□□□□ -0.53
COL27A1-204ENST00000477421 MUM1L1Q5H9M0 696 aa11.77□□□□□ -0.53
COL27A1-204ENST00000477421 ZNF667Q5HYK9 610 aa11.77□□□□□ -0.53
COL27A1-204ENST00000477421 SPOPLQ6IQ16 392 aa11.77□□□□□ -0.53
COL27A1-204ENST00000477421 TMEM35BQ8NCS4 154 aa11.77□□□□□ -0.53
COL27A1-204ENST00000477421 MOV10L1Q9BXT6 1211 aaKnown RBP11.77□□□□□ -0.53
COL27A1-204ENST00000477421 SALL4Q9UJQ4 1053 aa11.77□□□□□ -0.53
COL27A1-204ENST00000477421 HLA-DRAP01903 254 aa11.77□□□□□ -0.53
COL27A1-204ENST00000477421 CHRNA3P32297 505 aa11.77□□□□□ -0.53
COL27A1-204ENST00000477421 PPP2R2AP63151 447 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms