RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 CTSAP10619 480 aa17.15■□□□□ 0.34
COMMD6-209ENST00000477377 MARCKSP29966 332 aaPredicted RBP17.15■□□□□ 0.34
COMMD6-209ENST00000477377 EFNA5P52803 228 aa17.15■□□□□ 0.34
COMMD6-209ENST00000477377 COASYQ13057 564 aa17.15■□□□□ 0.34
COMMD6-209ENST00000477377 KARSQ15046 597 aaKnown RBP17.15■□□□□ 0.34
COMMD6-209ENST00000477377 NAB2Q15742 525 aa17.15■□□□□ 0.34
COMMD6-209ENST00000477377 CLUL1Q15846 466 aa17.15■□□□□ 0.34
COMMD6-209ENST00000477377 PUS10Q3MIT2 529 aaKnown RBP17.15■□□□□ 0.34
COMMD6-209ENST00000477377 SPECC1Q5M775 1068 aa17.15■□□□□ 0.34
COMMD6-209ENST00000477377 TMC7Q7Z402 723 aa17.15■□□□□ 0.34
COMMD6-209ENST00000477377 VPS52Q8N1B4 723 aa17.15■□□□□ 0.34
COMMD6-209ENST00000477377 AUTS2Q8WXX7 1259 aa17.15■□□□□ 0.34
COMMD6-209ENST00000477377 TMEM169Q96HH4 297 aa17.15■□□□□ 0.34
COMMD6-209ENST00000477377 EPSTI1Q96J88 318 aa17.15■□□□□ 0.34
COMMD6-209ENST00000477377 CDCA3Q99618 268 aaPredicted RBP17.15■□□□□ 0.34
COMMD6-209ENST00000477377 CCSER1Q9C0I3 900 aa17.15■□□□□ 0.34
COMMD6-209ENST00000477377 C17orf75Q9HAS0 396 aa17.15■□□□□ 0.34
COMMD6-209ENST00000477377 SNTG2Q9NY99 539 aa17.15■□□□□ 0.34
COMMD6-209ENST00000477377 IRAK3Q9Y616 596 aa17.15■□□□□ 0.34
COMMD6-209ENST00000477377 ZMYM2Q9UBW7 1377 aa17.15■□□□□ 0.34
COMMD6-209ENST00000477377 K7ERI5 159 aa17.14■□□□□ 0.33
COMMD6-209ENST00000477377 PTGESO14684 152 aa17.14■□□□□ 0.33
COMMD6-209ENST00000477377 N4BP3O15049 544 aa17.14■□□□□ 0.33
COMMD6-209ENST00000477377 CLASP2O75122 1294 aaKnown RBP17.14■□□□□ 0.33
COMMD6-209ENST00000477377 LIG1P18858 919 aa17.14■□□□□ 0.33
COMMD6-209ENST00000477377 PLCG1P19174 1290 aa17.14■□□□□ 0.33
COMMD6-209ENST00000477377 PROZP22891 400 aa17.14■□□□□ 0.33
COMMD6-209ENST00000477377 CACNB1Q02641 598 aaPredicted RBP17.14■□□□□ 0.33
COMMD6-209ENST00000477377 RAD51AP2Q09MP3 1159 aa17.14■□□□□ 0.33
COMMD6-209ENST00000477377 SMAD2Q15796 467 aaKnown RBP17.14■□□□□ 0.33
COMMD6-209ENST00000477377 TAS1R1Q7RTX1 841 aa17.14■□□□□ 0.33
COMMD6-209ENST00000477377 SMRP1Q8NCR6 262 aa17.14■□□□□ 0.33
COMMD6-209ENST00000477377 SPIRE2Q8WWL2 714 aa17.14■□□□□ 0.33
COMMD6-209ENST00000477377 KCNN1Q92952 543 aa17.14■□□□□ 0.33
COMMD6-209ENST00000477377 PPP2R3CQ969Q6 453 aa17.14■□□□□ 0.33
COMMD6-209ENST00000477377 CLIC6Q96NY7 704 aa17.14■□□□□ 0.33
COMMD6-209ENST00000477377 ACO2Q99798 780 aaKnown RBP17.14■□□□□ 0.33
COMMD6-209ENST00000477377 TIPINQ9BVW5 301 aa17.14■□□□□ 0.33
COMMD6-209ENST00000477377 TRIM6Q9C030 488 aaPredicted RBP17.14■□□□□ 0.33
COMMD6-209ENST00000477377 S1PR5Q9H228 398 aa17.14■□□□□ 0.33
COMMD6-209ENST00000477377 ENTPD7Q9NQZ7 604 aa17.14■□□□□ 0.33
COMMD6-209ENST00000477377 CD207Q9UJ71 328 aa17.14■□□□□ 0.33
COMMD6-209ENST00000477377 TNFSF13BQ9Y275 285 aa17.14■□□□□ 0.33
COMMD6-209ENST00000477377 FAN1Q9Y2M0 1017 aa17.14■□□□□ 0.33
COMMD6-209ENST00000477377 SRPRBQ9Y5M8 271 aaKnown RBP17.14■□□□□ 0.33
COMMD6-209ENST00000477377 NCOR1O75376 2440 aa17.13■□□□□ 0.33
COMMD6-209ENST00000477377 CCDC169A6NNP5 214 aa17.13■□□□□ 0.33
COMMD6-209ENST00000477377 SLC16A4O15374 487 aa17.13■□□□□ 0.33
COMMD6-209ENST00000477377 MEFVO15553 781 aaPredicted RBP17.13■□□□□ 0.33
COMMD6-209ENST00000477377 CXCL14O95715 111 aa17.13■□□□□ 0.33
COMMD6-209ENST00000477377 PLS3P13797 630 aa17.13■□□□□ 0.33
COMMD6-209ENST00000477377 UBA7P41226 1012 aa17.13■□□□□ 0.33
COMMD6-209ENST00000477377 MCM6Q14566 821 aa17.13■□□□□ 0.33
COMMD6-209ENST00000477377 SMC1AQ14683 1233 aaKnown RBP17.13■□□□□ 0.33
COMMD6-209ENST00000477377 ATF7IP2Q5U623 682 aa17.13■□□□□ 0.33
COMMD6-209ENST00000477377 SYCE2Q6PIF2 218 aa17.13■□□□□ 0.33
COMMD6-209ENST00000477377 TMEM161BQ8NDZ6 487 aa17.13■□□□□ 0.33
COMMD6-209ENST00000477377 RAD54LQ92698 747 aa17.13■□□□□ 0.33
COMMD6-209ENST00000477377 DRC1Q96MC2 740 aa17.13■□□□□ 0.33
COMMD6-209ENST00000477377 FIZ1Q96SL8 496 aa17.13■□□□□ 0.33
COMMD6-209ENST00000477377 PAAF1Q9BRP4 392 aa17.13■□□□□ 0.33
COMMD6-209ENST00000477377 KMT5AQ9NQR1 393 aa17.13■□□□□ 0.33
COMMD6-209ENST00000477377 KCND2Q9NZV8 630 aa17.13■□□□□ 0.33
COMMD6-209ENST00000477377 CACNG4Q9UBN1 327 aa17.13■□□□□ 0.33
COMMD6-209ENST00000477377 PARP2Q9UGN5 583 aa17.13■□□□□ 0.33
COMMD6-209ENST00000477377 PHLPP2Q6ZVD8 1323 aa17.13■□□□□ 0.33
COMMD6-209ENST00000477377 TDRD15B5MCY1 1934 aaKnown RBP17.12■□□□□ 0.33
COMMD6-209ENST00000477377 CARNS1A5YM72 827 aa17.12■□□□□ 0.33
COMMD6-209ENST00000477377 C19orf67A6NJJ6 358 aa17.12■□□□□ 0.33
COMMD6-209ENST00000477377 RECQL4O94761 1208 aa17.12■□□□□ 0.33
COMMD6-209ENST00000477377 SSBP05455 408 aaKnown RBP eCLIP17.12■□□□□ 0.33
COMMD6-209ENST00000477377 NASPP49321 788 aaPredicted RBP17.12■□□□□ 0.33
COMMD6-209ENST00000477377 NDUFV1P49821 464 aa17.12■□□□□ 0.33
COMMD6-209ENST00000477377 ZNF131P52739 623 aa17.12■□□□□ 0.33
COMMD6-209ENST00000477377 CEBPZQ03701 1054 aaKnown RBP17.12■□□□□ 0.33
COMMD6-209ENST00000477377 DMP1Q13316 513 aaPredicted RBP17.12■□□□□ 0.33
COMMD6-209ENST00000477377 SMAD4Q13485 552 aaKnown RBP17.12■□□□□ 0.33
COMMD6-209ENST00000477377 GIT2Q14161 759 aa17.12■□□□□ 0.33
COMMD6-209ENST00000477377 SLC39A14Q15043 492 aa17.12■□□□□ 0.33
COMMD6-209ENST00000477377 PTPN14Q15678 1187 aa17.12■□□□□ 0.33
COMMD6-209ENST00000477377 CEP120Q8N960 986 aa17.12■□□□□ 0.33
COMMD6-209ENST00000477377 FEZF2Q8TBJ5 459 aa17.12■□□□□ 0.33
COMMD6-209ENST00000477377 SLC22A17Q8WUG5 538 aa17.12■□□□□ 0.33
COMMD6-209ENST00000477377 FAM193BQ96PV7 902 aaPredicted RBP17.12■□□□□ 0.33
COMMD6-209ENST00000477377 TARS2Q9BW92 718 aaKnown RBP17.12■□□□□ 0.33
COMMD6-209ENST00000477377 ZSCAN16Q9H4T2 348 aaPredicted RBP17.12■□□□□ 0.33
COMMD6-209ENST00000477377 RBM19Q9Y4C8 960 aaKnown RBP17.12■□□□□ 0.33
COMMD6-209ENST00000477377 HCFC2Q9Y5Z7 792 aa17.12■□□□□ 0.33
COMMD6-209ENST00000477377 BRD1O95696 1058 aa17.11■□□□□ 0.33
COMMD6-209ENST00000477377 MAPTP10636 758 aaKnown RBP17.11■□□□□ 0.33
COMMD6-209ENST00000477377 IGFBP6P24592 240 aaPredicted RBP17.11■□□□□ 0.33
COMMD6-209ENST00000477377 DDIT3P35638 169 aa17.11■□□□□ 0.33
COMMD6-209ENST00000477377 OR1G1P47890 313 aa17.11■□□□□ 0.33
COMMD6-209ENST00000477377 NCKAP1LP55160 1127 aa17.11■□□□□ 0.33
COMMD6-209ENST00000477377 ZP2Q05996 745 aa17.11■□□□□ 0.33
COMMD6-209ENST00000477377 GRIK3Q13003 919 aa17.11■□□□□ 0.33
COMMD6-209ENST00000477377 PKP1Q13835 747 aa17.11■□□□□ 0.33
COMMD6-209ENST00000477377 XKR4Q5GH76 650 aa17.11■□□□□ 0.33
COMMD6-209ENST00000477377 ANKRD54Q6NXT1 300 aa17.11■□□□□ 0.33
COMMD6-209ENST00000477377 ALKAL1Q6UXT8 129 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms