RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 IPPQ9Y573 584 aa12.72□□□□□ -0.37
BRCA1-213ENST00000476777 PCDHGA2Q9Y5H1 932 aa12.72□□□□□ -0.37
BRCA1-213ENST00000476777 COL4A3Q01955 1670 aa12.72□□□□□ -0.37
BRCA1-213ENST00000476777 ZFYVE26Q68DK2 2539 aa12.71□□□□□ -0.37
BRCA1-213ENST00000476777 TDRD15B5MCY1 1934 aaKnown RBP12.71□□□□□ -0.37
BRCA1-213ENST00000476777 CYP3A7-CYP3A51PA0A087WV96 503 aa12.71□□□□□ -0.37
BRCA1-213ENST00000476777 LAMTOR5O43504 91 aa12.71□□□□□ -0.37
BRCA1-213ENST00000476777 ZMYND10O75800 440 aa12.71□□□□□ -0.37
BRCA1-213ENST00000476777 RPL17P18621 184 aaKnown RBP12.71□□□□□ -0.37
BRCA1-213ENST00000476777 CYP3A7P24462 503 aa12.71□□□□□ -0.37
BRCA1-213ENST00000476777 MLH1P40692 756 aa12.71□□□□□ -0.37
BRCA1-213ENST00000476777 SCNN1GP51170 649 aa12.71□□□□□ -0.37
BRCA1-213ENST00000476777 NPEPPSP55786 919 aa12.71□□□□□ -0.37
BRCA1-213ENST00000476777 PRKCQQ04759 706 aa12.71□□□□□ -0.37
BRCA1-213ENST00000476777 CSTF1Q05048 431 aaKnown RBP12.71□□□□□ -0.37
BRCA1-213ENST00000476777 LAMTOR4Q0VGL1 99 aa12.71□□□□□ -0.37
BRCA1-213ENST00000476777 MLF2Q15773 248 aaPredicted RBP12.71□□□□□ -0.37
BRCA1-213ENST00000476777 USP41Q3LFD5 358 aa12.71□□□□□ -0.37
BRCA1-213ENST00000476777 SLC44A4Q53GD3 710 aa12.71□□□□□ -0.37
BRCA1-213ENST00000476777 GLYCTKQ8IVS8 523 aa12.71□□□□□ -0.37
BRCA1-213ENST00000476777 ZNF579Q8NAF0 562 aaKnown RBP12.71□□□□□ -0.37
BRCA1-213ENST00000476777 ZBTB44Q8NCP5 570 aa12.71□□□□□ -0.37
BRCA1-213ENST00000476777 CNNM3Q8NE01 707 aa12.71□□□□□ -0.37
BRCA1-213ENST00000476777 CCDC148Q8NFR7 591 aa12.71□□□□□ -0.37
BRCA1-213ENST00000476777 ETNPPLQ8TBG4 499 aa12.71□□□□□ -0.37
BRCA1-213ENST00000476777 TBCKQ8TEA7 893 aa12.71□□□□□ -0.37
BRCA1-213ENST00000476777 ATRIPQ8WXE1 791 aa12.71□□□□□ -0.37
BRCA1-213ENST00000476777 TMEM143Q96AN5 459 aa12.71□□□□□ -0.37
BRCA1-213ENST00000476777 ZFP42Q96MM3 310 aa12.71□□□□□ -0.37
BRCA1-213ENST00000476777 MBOAT7Q96N66 472 aa12.71□□□□□ -0.37
BRCA1-213ENST00000476777 EIF2AQ9BY44 585 aaKnown RBP12.71□□□□□ -0.37
BRCA1-213ENST00000476777 OSBPL6Q9BZF3 934 aa12.71□□□□□ -0.37
BRCA1-213ENST00000476777 VPS54Q9P1Q0 977 aa12.71□□□□□ -0.37
BRCA1-213ENST00000476777 CDH7Q9ULB5 785 aa12.71□□□□□ -0.37
BRCA1-213ENST00000476777 ANKRD11Q6UB99 2663 aaPredicted RBP12.7□□□□□ -0.38
BRCA1-213ENST00000476777 PATJQ8NI35 1801 aa12.7□□□□□ -0.38
BRCA1-213ENST00000476777 FAM170BA6NMN3 283 aa12.7□□□□□ -0.38
BRCA1-213ENST00000476777 PRR5-ARHGAP8B1AHC4 643 aa12.7□□□□□ -0.38
BRCA1-213ENST00000476777 EML1O00423 815 aa12.7□□□□□ -0.38
BRCA1-213ENST00000476777 TDP2O95551 362 aa12.7□□□□□ -0.38
BRCA1-213ENST00000476777 TGM1P22735 817 aa12.7□□□□□ -0.38
BRCA1-213ENST00000476777 ARHGAP8P85298 464 aa12.7□□□□□ -0.38
BRCA1-213ENST00000476777 LMNB2Q03252 620 aa12.7□□□□□ -0.38
BRCA1-213ENST00000476777 UBXN2BQ14CS0 331 aa12.7□□□□□ -0.38
BRCA1-213ENST00000476777 NTRK3Q16288 839 aa12.7□□□□□ -0.38
BRCA1-213ENST00000476777 FUT10Q6P4F1 479 aa12.7□□□□□ -0.38
BRCA1-213ENST00000476777 GRASPQ7Z6J2 395 aaPredicted RBP12.7□□□□□ -0.38
BRCA1-213ENST00000476777 PSPC1Q8WXF1 523 aaKnown RBP12.7□□□□□ -0.38
BRCA1-213ENST00000476777 SLC7A3Q8WY07 619 aa12.7□□□□□ -0.38
BRCA1-213ENST00000476777 NELL1Q92832 810 aa12.7□□□□□ -0.38
BRCA1-213ENST00000476777 COLEC11Q9BWP8 271 aa12.7□□□□□ -0.38
BRCA1-213ENST00000476777 EPC1Q9H2F5 836 aa12.7□□□□□ -0.38
BRCA1-213ENST00000476777 DHX33Q9H6R0 707 aaKnown RBP12.7□□□□□ -0.38
BRCA1-213ENST00000476777 ZSCAN32Q9NX65 697 aa12.7□□□□□ -0.38
BRCA1-213ENST00000476777 SMG5Q9UPR3 1016 aaKnown RBP12.7□□□□□ -0.38
BRCA1-213ENST00000476777 HES2Q9Y543 173 aa12.7□□□□□ -0.38
BRCA1-213ENST00000476777 FRYQ5TBA9 3013 aa12.7□□□□□ -0.38
BRCA1-213ENST00000476777 NID2Q14112 1375 aa12.69□□□□□ -0.38
BRCA1-213ENST00000476777 NOTCH4Q99466 2003 aa12.69□□□□□ -0.38
BRCA1-213ENST00000476777 LILRB5O75023 590 aa12.69□□□□□ -0.38
BRCA1-213ENST00000476777 NR1I2O75469 434 aa12.69□□□□□ -0.38
BRCA1-213ENST00000476777 QARSP47897 775 aaKnown RBP12.69□□□□□ -0.38
BRCA1-213ENST00000476777 NTHL1P78549 312 aa12.69□□□□□ -0.38
BRCA1-213ENST00000476777 AKAP17AQ02040 695 aaKnown RBP12.69□□□□□ -0.38
BRCA1-213ENST00000476777 CREMQ03060 361 aa12.69□□□□□ -0.38
BRCA1-213ENST00000476777 EXOC8Q8IYI6 725 aa12.69□□□□□ -0.38
BRCA1-213ENST00000476777 RNF149Q8NC42 400 aa12.69□□□□□ -0.38
BRCA1-213ENST00000476777 GSTCDQ8NEC7 633 aa12.69□□□□□ -0.38
BRCA1-213ENST00000476777 FGF13Q92913 245 aa12.69□□□□□ -0.38
BRCA1-213ENST00000476777 CCDC51Q96ER9 411 aa12.69□□□□□ -0.38
BRCA1-213ENST00000476777 CEP170P1Q96L14 293 aa12.69□□□□□ -0.38
BRCA1-213ENST00000476777 LTB4R2Q9NPC1 389 aa12.69□□□□□ -0.38
BRCA1-213ENST00000476777 WRAP73Q9P2S5 460 aaPredicted RBP12.69□□□□□ -0.38
BRCA1-213ENST00000476777 FBXW11Q9UKB1 542 aa12.69□□□□□ -0.38
BRCA1-213ENST00000476777 ADAM28Q9UKQ2 775 aa12.69□□□□□ -0.38
BRCA1-213ENST00000476777 CDV3Q9UKY7 258 aaKnown RBP12.69□□□□□ -0.38
BRCA1-213ENST00000476777 PPME1Q9Y570 386 aa12.69□□□□□ -0.38
BRCA1-213ENST00000476777 FASNP49327 2511 aaKnown RBP12.69□□□□□ -0.38
BRCA1-213ENST00000476777 DCDC2BA2VCK2 349 aa12.68□□□□□ -0.38
BRCA1-213ENST00000476777 TSPAN1O60635 241 aa12.68□□□□□ -0.38
BRCA1-213ENST00000476777 ERLIN2O94905 339 aa12.68□□□□□ -0.38
BRCA1-213ENST00000476777 HMGB1P09429 215 aaKnown RBP12.68□□□□□ -0.38
BRCA1-213ENST00000476777 HNRNPA1P09651 372 aaKnown RBP eCLIP12.68□□□□□ -0.38
BRCA1-213ENST00000476777 CPA1P15085 419 aa12.68□□□□□ -0.38
BRCA1-213ENST00000476777 CD72P21854 359 aa12.68□□□□□ -0.38
BRCA1-213ENST00000476777 AXLP30530 894 aa12.68□□□□□ -0.38
BRCA1-213ENST00000476777 RFC5P40937 340 aa12.68□□□□□ -0.38
BRCA1-213ENST00000476777 MAGEA9P43362 315 aa12.68□□□□□ -0.38
BRCA1-213ENST00000476777 FGD1P98174 961 aa12.68□□□□□ -0.38
BRCA1-213ENST00000476777 KRT32Q14532 448 aa12.68□□□□□ -0.38
BRCA1-213ENST00000476777 PCBP1Q15365 356 aaKnown RBP eCLIP12.68□□□□□ -0.38
BRCA1-213ENST00000476777 RTP2Q5QGT7 225 aa12.68□□□□□ -0.38
BRCA1-213ENST00000476777 NOTUMQ6P988 496 aa12.68□□□□□ -0.38
BRCA1-213ENST00000476777 PRSS55Q6UWB4 352 aaPredicted RBP12.68□□□□□ -0.38
BRCA1-213ENST00000476777 RSPO2Q6UXX9 243 aaPredicted RBP12.68□□□□□ -0.38
BRCA1-213ENST00000476777 Q6ZUG5 572 aa12.68□□□□□ -0.38
BRCA1-213ENST00000476777 MTSS1LQ765P7 747 aa12.68□□□□□ -0.38
BRCA1-213ENST00000476777 FERMT3Q86UX7 667 aa12.68□□□□□ -0.38
BRCA1-213ENST00000476777 RABGGTAQ92696 567 aa12.68□□□□□ -0.38
BRCA1-213ENST00000476777 BRF1Q92994 677 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms