RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 NEK11Q8NG66 645 aa31.38■■■□□ 2.61
VEGFA-211ENST00000476772 PRIMPOLQ96LW4 560 aa31.38■■■□□ 2.61
VEGFA-211ENST00000476772 CDHR5Q9HBB8 845 aa31.38■■■□□ 2.61
VEGFA-211ENST00000476772 PTPRHQ9HD43 1115 aa31.38■■■□□ 2.61
VEGFA-211ENST00000476772 CNTNAP2Q9UHC6 1331 aa31.37■■■□□ 2.61
VEGFA-211ENST00000476772 ESPNB1AK53 854 aa31.37■■■□□ 2.61
VEGFA-211ENST00000476772 KRT9P35527 623 aa31.37■■■□□ 2.61
VEGFA-211ENST00000476772 MCL1Q07820 350 aa31.37■■■□□ 2.61
VEGFA-211ENST00000476772 EXOC3L4Q17RC7 722 aa31.37■■■□□ 2.61
VEGFA-211ENST00000476772 MPZL3Q6UWV2 235 aa31.37■■■□□ 2.61
VEGFA-211ENST00000476772 PARD3BQ8TEW8 1205 aa31.37■■■□□ 2.61
VEGFA-211ENST00000476772 CCDC127Q96BQ5 260 aa31.37■■■□□ 2.61
VEGFA-211ENST00000476772 IQCDQ96DY2 449 aa31.37■■■□□ 2.61
VEGFA-211ENST00000476772 PANX2Q96RD6 677 aa31.37■■■□□ 2.61
VEGFA-211ENST00000476772 TMX1Q9H3N1 280 aa31.37■■■□□ 2.61
VEGFA-211ENST00000476772 AGPAT5Q9NUQ2 364 aa31.37■■■□□ 2.61
VEGFA-211ENST00000476772 LUC7L2Q9Y383 392 aaKnown RBP31.37■■■□□ 2.61
VEGFA-211ENST00000476772 GRIN2DO15399 1336 aa31.36■■■□□ 2.61
VEGFA-211ENST00000476772 GTPBP10A4D1E9 387 aaKnown RBP31.36■■■□□ 2.61
VEGFA-211ENST00000476772 PPP3CAQ08209 521 aa31.36■■■□□ 2.61
VEGFA-211ENST00000476772 EEF1DP3Q658K8 133 aa31.36■■■□□ 2.61
VEGFA-211ENST00000476772 GBP6Q6ZN66 633 aa31.36■■■□□ 2.61
VEGFA-211ENST00000476772 CDR2LQ86X02 465 aaPredicted RBP31.36■■■□□ 2.61
VEGFA-211ENST00000476772 TMC2Q8TDI7 906 aa31.36■■■□□ 2.61
VEGFA-211ENST00000476772 OSMRQ99650 979 aa31.36■■■□□ 2.61
VEGFA-211ENST00000476772 GCOM2Q9BZD3 368 aaPredicted RBP31.36■■■□□ 2.61
VEGFA-211ENST00000476772 XRN2Q9H0D6 950 aaKnown RBP eCLIP31.36■■■□□ 2.612e-8■■■■□ 25.5
VEGFA-211ENST00000476772 ABHD10Q9NUJ1 306 aa31.36■■■□□ 2.61
VEGFA-211ENST00000476772 TNFSF13BQ9Y275 285 aa31.36■■■□□ 2.61
VEGFA-211ENST00000476772 A0A1W2PQJ5 194 aa31.35■■■□□ 2.61
VEGFA-211ENST00000476772 LRRIQ3A6PVS8 624 aaPredicted RBP31.35■■■□□ 2.61
VEGFA-211ENST00000476772 TULP1O00294 542 aaPredicted RBP31.35■■■□□ 2.61
VEGFA-211ENST00000476772 SLC9A1P19634 815 aa31.35■■■□□ 2.61
VEGFA-211ENST00000476772 ACLYP53396 1101 aa31.35■■■□□ 2.61
VEGFA-211ENST00000476772 MYL7Q01449 175 aa31.35■■■□□ 2.61
VEGFA-211ENST00000476772 APBA1Q02410 837 aa31.35■■■□□ 2.61
VEGFA-211ENST00000476772 NOLC1Q14978 699 aaKnown RBP eCLIP31.35■■■□□ 2.61
VEGFA-211ENST00000476772 ZNF568Q3ZCX4 644 aa31.35■■■□□ 2.61
VEGFA-211ENST00000476772 SEZ6Q53EL9 994 aa31.35■■■□□ 2.61
VEGFA-211ENST00000476772 SESTD1Q86VW0 696 aa31.35■■■□□ 2.61
VEGFA-211ENST00000476772 TMEM139Q8IV31 216 aa31.35■■■□□ 2.61
VEGFA-211ENST00000476772 CCDC112Q8NEF3 446 aa31.35■■■□□ 2.61
VEGFA-211ENST00000476772 CCDC51Q96ER9 411 aa31.35■■■□□ 2.61
VEGFA-211ENST00000476772 GCNT4Q9P109 453 aa31.35■■■□□ 2.61
VEGFA-211ENST00000476772 FAM189A1O60320 539 aa31.35■■■□□ 2.61
VEGFA-211ENST00000476772 NOL4O94818 638 aa31.35■■■□□ 2.61
VEGFA-211ENST00000476772 TAF2Q6P1X5 1199 aa31.35■■■□□ 2.61
VEGFA-211ENST00000476772 TSPAN1O60635 241 aa31.34■■■□□ 2.61
VEGFA-211ENST00000476772 FGFR4P22455 802 aa31.34■■■□□ 2.61
VEGFA-211ENST00000476772 MSNP26038 577 aaKnown RBP31.34■■■□□ 2.61
VEGFA-211ENST00000476772 PON1P27169 355 aa31.34■■■□□ 2.61
VEGFA-211ENST00000476772 GCLMP48507 274 aa31.34■■■□□ 2.61
VEGFA-211ENST00000476772 HSP90AA2PQ14568 343 aaPredicted RBP31.34■■■□□ 2.61
VEGFA-211ENST00000476772 NME8Q8N427 588 aa31.34■■■□□ 2.61
VEGFA-211ENST00000476772 CPB2Q96IY4 423 aa31.34■■■□□ 2.61
VEGFA-211ENST00000476772 POP1Q99575 1024 aaKnown RBP31.34■■■□□ 2.61
VEGFA-211ENST00000476772 BAG1Q99933 345 aaPredicted RBP31.34■■■□□ 2.61
VEGFA-211ENST00000476772 RBAKQ9NYW8 714 aaPredicted RBP31.34■■■□□ 2.61
VEGFA-211ENST00000476772 OGTO15294 1046 aa31.33■■■□□ 2.61
VEGFA-211ENST00000476772 NRDCO43847 1150 aa31.33■■■□□ 2.61
VEGFA-211ENST00000476772 CABYRO75952 493 aa31.33■■■□□ 2.61
VEGFA-211ENST00000476772 ERLIN2O94905 339 aa31.33■■■□□ 2.61
VEGFA-211ENST00000476772 ACTN1P12814 892 aa31.33■■■□□ 2.61
VEGFA-211ENST00000476772 ARF4P18085 180 aaPredicted RBP31.33■■■□□ 2.61
VEGFA-211ENST00000476772 ENPEPQ07075 957 aa31.33■■■□□ 2.61
VEGFA-211ENST00000476772 PSMD6Q15008 389 aa31.33■■■□□ 2.61
VEGFA-211ENST00000476772 DPY19L2P1Q6NXN4 242 aa31.33■■■□□ 2.61
VEGFA-211ENST00000476772 DNAJC5GQ8N7S2 189 aa31.33■■■□□ 2.61
VEGFA-211ENST00000476772 UNC93B1Q9H1C4 597 aa31.33■■■□□ 2.61
VEGFA-211ENST00000476772 CDT1Q9H211 546 aa31.33■■■□□ 2.61
VEGFA-211ENST00000476772 TOPORSQ9NS56 1045 aaPredicted RBP31.33■■■□□ 2.61
VEGFA-211ENST00000476772 MOXD2PA6NHM9 499 aa31.32■■■□□ 2.6
VEGFA-211ENST00000476772 N4BP1O75113 896 aaKnown RBP31.32■■■□□ 2.6
VEGFA-211ENST00000476772 DARSP14868 501 aaKnown RBP31.32■■■□□ 2.6
VEGFA-211ENST00000476772 TNFSF9P41273 254 aa31.32■■■□□ 2.6
VEGFA-211ENST00000476772 WNT7BP56706 349 aa31.32■■■□□ 2.6
VEGFA-211ENST00000476772 ZBED6P86452 979 aa31.32■■■□□ 2.6
VEGFA-211ENST00000476772 USP37Q86T82 979 aa31.32■■■□□ 2.6
VEGFA-211ENST00000476772 VTI1AQ96AJ9 217 aa31.32■■■□□ 2.6
VEGFA-211ENST00000476772 GANQ9H2C0 597 aa31.32■■■□□ 2.6
VEGFA-211ENST00000476772 PDZD7Q9H5P4 517 aa31.32■■■□□ 2.6
VEGFA-211ENST00000476772 DLATP10515 647 aaKnown RBP31.32■■■□□ 2.6
VEGFA-211ENST00000476772 DNAJC7Q99615 494 aa31.32■■■□□ 2.6
VEGFA-211ENST00000476772 TSEN34Q9BSV6 310 aaKnown RBP31.32■■■□□ 2.6
VEGFA-211ENST00000476772 TMEM117Q9H0C3 514 aa31.32■■■□□ 2.6
VEGFA-211ENST00000476772 PLCB1Q9NQ66 1216 aa31.32■■■□□ 2.6
VEGFA-211ENST00000476772 STX10O60499 249 aa31.31■■■□□ 2.6
VEGFA-211ENST00000476772 MXI1P50539 228 aa31.31■■■□□ 2.6
VEGFA-211ENST00000476772 ITGA7Q13683 1181 aa31.31■■■□□ 2.6
VEGFA-211ENST00000476772 OR8K1Q8NGG5 319 aa31.31■■■□□ 2.6
VEGFA-211ENST00000476772 SIX2Q9NPC8 291 aa31.31■■■□□ 2.6
VEGFA-211ENST00000476772 CEP72Q9P209 647 aa31.31■■■□□ 2.6
VEGFA-211ENST00000476772 P4HA2O15460 535 aa31.3■■■□□ 2.6
VEGFA-211ENST00000476772 SERINC5Q86VE9 423 aa31.3■■■□□ 2.6
VEGFA-211ENST00000476772 ZNF397Q8NF99 534 aaPredicted RBP31.3■■■□□ 2.6
VEGFA-211ENST00000476772 TMEM40Q8WWA1 233 aa31.3■■■□□ 2.6
VEGFA-211ENST00000476772 WNT8BQ93098 351 aa31.3■■■□□ 2.6
VEGFA-211ENST00000476772 EDEM3Q9BZQ6 932 aa31.3■■■□□ 2.6
VEGFA-211ENST00000476772 PDE11AQ9HCR9 933 aa31.3■■■□□ 2.6
VEGFA-211ENST00000476772 EIF4BP23588 611 aaKnown RBP31.29■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms