RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM2-211	ENST00000475835	SYTL1	Q8IYJ3	562 aa		4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	C7orf61	Q8IZ16	206 aa		4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	ATAD1	Q8NBU5	361 aa		4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	EHBP1	Q8NDI1	1231 aa		4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	OR6S1	Q8NH40	331 aa		4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	CDC26	Q8NHZ8	85 aa		4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	ADAM32	Q8TC27	787 aa		4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	AFG1L	Q8WV93	481 aa		4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	SEPT1	Q8WYJ6	367 aa		4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	PTPRN2	Q92932	1015 aa		4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	TTC17	Q96AE7	1141 aa		4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	ALKBH8	Q96BT7	664 aa	Known RBP	4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	HAUS1	Q96CS2	278 aa		4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	METTL2A	Q96IZ6	378 aa	Known RBP	4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	FAM20A	Q96MK3	541 aa		4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	TTC25	Q96NG3	672 aa		4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	PPP1R10	Q96QC0	940 aa	Known RBP	4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	CCDC77	Q9BR77	488 aa		4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	ERP44	Q9BS26	406 aa		4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	PI4K2A	Q9BTU6	479 aa		4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	BEGAIN	Q9BUH8	593 aa		4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	TEX13B	Q9BXU2	312 aa		4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	KRT23	Q9C075	422 aa		4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	CEP44	Q9C0F1	390 aa		4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	NYX	Q9GZU5	481 aa		4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	NAT10	Q9H0A0	1025 aa	Known RBP	4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	PDE11A	Q9HCR9	933 aa		4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	ABCB6	Q9NP58	842 aa		4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	TIMMDC1	Q9NPL8	285 aa		4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	PFDN4	Q9NQP4	134 aa		4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	IARS2	Q9NSE4	1012 aa	Known RBP	4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	PAQR5	Q9NXK6	330 aa	Predicted RBP	4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	LARS	Q9P2J5	1176 aa	Known RBP	4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	MTRR	Q9UBK8	725 aa		4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	ZNF112	Q9UJU3	913 aa		4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	CNOT6	Q9ULM6	557 aa	Known RBP	4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	AGAP1	Q9UPQ3	857 aa		4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	DNM3	Q9UQ16	869 aa		4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	IPP	Q9Y573	584 aa		4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	PCDHB12	Q9Y5F1	795 aa		4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	BCL9	O00512	1426 aa		4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	DLG5	Q8TDM6	1919 aa		4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	LMTK2	Q8IWU2	1503 aa		4.11	□□□□□ -1.75
LSM2-211	ENST00000475835	NAV1	Q8NEY1	1877 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835		A0A0J9YVX5	310 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	PNMA6F	A0A0J9YX94	578 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	LOC100653049	A0A140TA62	436 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	MAGEB16	A2A368	324 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	KLRG2	A4D1S0	409 aa	Predicted RBP	4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	PSD	A5PKW4	1024 aa	Predicted RBP	4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	SOWAHD	A6NJG2	315 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	GOLGA8J	A6NMD2	632 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	GOLGA8B	A8MQT2	603 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	MIF4GD	A9UHW6	222 aa	Known RBP	4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	PIK3CD	O00329	1044 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	WASL	O00401	505 aa	Predicted RBP	4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	XPO1	O14980	1071 aa	Known RBP	4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	BET1	O15155	118 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	RNMT	O43148	476 aa	Known RBP	4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	LZTS3	O60299	673 aa	Predicted RBP	4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	STX10	O60499	249 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	CCNT1	O60563	726 aa	Known RBP	4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	NIPSNAP2	O75323	286 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	KATNA1	O75449	491 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	KRT34	O76011	436 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	WFS1	O76024	890 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	ATP6V1G2	O95670	118 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	MT-ND3	P03897	115 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	ATP5B	P06576	529 aa	Known RBP	4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	S100A9	P06702	114 aa	Known RBP	4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	GSTA1	P08263	222 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	RPS17	P08708	135 aa	Known RBP	4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	CTSH	P09668	335 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	TMEM11	P17152	192 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	TYRP1	P17643	537 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	FUT4	P22083	530 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	GART	P22102	1010 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	RPS6KB1	P23443	525 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	CCND1	P24385	295 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	PML	P29590	882 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	GALNS	P34059	522 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	LONP1	P36776	959 aa	Known RBP	4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	SULT1E1	P49888	294 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	SEPHS1	P49903	392 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	ST13	P50502	369 aa	Known RBP	4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	ARSD	P51689	593 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	HAND2	P61296	217 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	PPP2R2A	P63151	447 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	ARID5A	Q03989	594 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	EXOSC9	Q06265	439 aa	Known RBP	4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	MYO1E	Q12965	1108 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	LSAMP	Q13449	338 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	TRIM14	Q14142	442 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	NAA30	Q147X3	362 aa	Predicted RBP	4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	ZNF124	Q15973	351 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	IFI16	Q16666	785 aa	Known RBP	4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	LONRF2	Q1L5Z9	754 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	RGS21	Q2M5E4	152 aa		4.1	□□□□□ -1.75
LSM2-211	ENST00000475835	CWF19L2	Q2TBE0	894 aa	Known RBP	4.1	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms