RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 ZNF528Q3MIS6 628 aa14.04□□□□□ -0.16
SKA3-206ENST00000475251 TAS1R1Q7RTX1 841 aa14.04□□□□□ -0.16
SKA3-206ENST00000475251 FERMT3Q86UX7 667 aa14.04□□□□□ -0.16
SKA3-206ENST00000475251 PALB2Q86YC2 1186 aa14.04□□□□□ -0.16
SKA3-206ENST00000475251 C4orf19Q8IY42 314 aa14.04□□□□□ -0.16
SKA3-206ENST00000475251 DAGLBQ8NCG7 672 aa14.04□□□□□ -0.16
SKA3-206ENST00000475251 PJA1Q8NG27 643 aa14.04□□□□□ -0.16
SKA3-206ENST00000475251 KCNB2Q92953 911 aa14.04□□□□□ -0.16
SKA3-206ENST00000475251 MTRQ99707 1265 aa14.04□□□□□ -0.16
SKA3-206ENST00000475251 NAP1L4Q99733 375 aaKnown RBP14.04□□□□□ -0.16
SKA3-206ENST00000475251 CSRNP2Q9H175 543 aa14.04□□□□□ -0.16
SKA3-206ENST00000475251 DLGAP2Q9P1A6 1054 aa14.04□□□□□ -0.16
SKA3-206ENST00000475251 NUMBLQ9Y6R0 609 aa14.04□□□□□ -0.16
SKA3-206ENST00000475251 ZMYM2Q9UBW7 1377 aa14.04□□□□□ -0.16
SKA3-206ENST00000475251 MED19A0JLT2 244 aaPredicted RBP14.03□□□□□ -0.16
SKA3-206ENST00000475251 CPLX1O14810 134 aa14.03□□□□□ -0.16
SKA3-206ENST00000475251 TSPAN1O60635 241 aa14.03□□□□□ -0.16
SKA3-206ENST00000475251 ZMYND10O75800 440 aa14.03□□□□□ -0.16
SKA3-206ENST00000475251 SPATA31D3P0C874 917 aa14.03□□□□□ -0.16
SKA3-206ENST00000475251 GCFC2P16383 781 aaKnown RBP14.03□□□□□ -0.16
SKA3-206ENST00000475251 FSHRP23945 695 aa14.03□□□□□ -0.16
SKA3-206ENST00000475251 PDIA3P30101 505 aaKnown RBP14.03□□□□□ -0.16
SKA3-206ENST00000475251 MAGEA9P43362 315 aa14.03□□□□□ -0.16
SKA3-206ENST00000475251 SCNN1GP51170 649 aa14.03□□□□□ -0.16
SKA3-206ENST00000475251 EVCP57679 992 aa14.03□□□□□ -0.16
SKA3-206ENST00000475251 CCT2P78371 535 aaKnown RBP14.03□□□□□ -0.16
SKA3-206ENST00000475251 POU5F1BQ06416 359 aa14.03□□□□□ -0.16
SKA3-206ENST00000475251 FUT10Q6P4F1 479 aa14.03□□□□□ -0.16
SKA3-206ENST00000475251 CPLX2Q6PUV4 134 aaKnown RBP14.03□□□□□ -0.16
SKA3-206ENST00000475251 SPATA31D4Q6ZUB0 917 aa14.03□□□□□ -0.16
SKA3-206ENST00000475251 MTSS1LQ765P7 747 aa14.03□□□□□ -0.16
SKA3-206ENST00000475251 GPR161Q8N6U8 529 aaKnown RBP14.03□□□□□ -0.16
SKA3-206ENST00000475251 LXNQ9BS40 222 aa14.03□□□□□ -0.16
SKA3-206ENST00000475251 BCO2Q9BYV7 579 aa14.03□□□□□ -0.16
SKA3-206ENST00000475251 DLL3Q9NYJ7 618 aa14.03□□□□□ -0.16
SKA3-206ENST00000475251 ADAM28Q9UKQ2 775 aa14.03□□□□□ -0.16
SKA3-206ENST00000475251 VAV3Q9UKW4 847 aa14.03□□□□□ -0.16
SKA3-206ENST00000475251 TDRD15B5MCY1 1934 aaKnown RBP14.03□□□□□ -0.16
SKA3-206ENST00000475251 MTCL1Q9Y4B5 1905 aaKnown RBP14.03□□□□□ -0.16
SKA3-206ENST00000475251 CACNA1AO00555 2505 aa14.02□□□□□ -0.16
SKA3-206ENST00000475251 SF3B1O75533 1304 aaKnown RBP eCLIP14.02□□□□□ -0.17
SKA3-206ENST00000475251 CCDC194A0A1B0GVG4 234 aa14.02□□□□□ -0.17
SKA3-206ENST00000475251 INO80B-WBP1J3KQ70 363 aa14.02□□□□□ -0.17
SKA3-206ENST00000475251 M0R2N6 131 aa14.02□□□□□ -0.17
SKA3-206ENST00000475251 EML1O00423 815 aa14.02□□□□□ -0.17
SKA3-206ENST00000475251 TBX3O15119 743 aa14.02□□□□□ -0.17
SKA3-206ENST00000475251 SPTLC1O15269 473 aa14.02□□□□□ -0.17
SKA3-206ENST00000475251 MARCH6O60337 910 aa14.02□□□□□ -0.17
SKA3-206ENST00000475251 HNRNPA1P09651 372 aaKnown RBP eCLIP14.02□□□□□ -0.17
SKA3-206ENST00000475251 MYBP10242 640 aa14.02□□□□□ -0.17
SKA3-206ENST00000475251 HSPA4P34932 840 aa14.02□□□□□ -0.17
SKA3-206ENST00000475251 PTENP60484 403 aa14.02□□□□□ -0.17
SKA3-206ENST00000475251 PFKPQ01813 784 aa14.02□□□□□ -0.17
SKA3-206ENST00000475251 PRKCQQ04759 706 aa14.02□□□□□ -0.17
SKA3-206ENST00000475251 GRIK3Q13003 919 aa14.02□□□□□ -0.17
SKA3-206ENST00000475251 EPHA7Q15375 998 aa14.02□□□□□ -0.17
SKA3-206ENST00000475251 LIN9Q5TKA1 542 aa14.02□□□□□ -0.17
SKA3-206ENST00000475251 PPP4R3AQ6IN85 833 aa14.02□□□□□ -0.17
SKA3-206ENST00000475251 LILRA6Q6PI73 481 aa14.02□□□□□ -0.17
SKA3-206ENST00000475251 RSPO2Q6UXX9 243 aaPredicted RBP14.02□□□□□ -0.17
SKA3-206ENST00000475251 SECISBP2LQ93073 1101 aaKnown RBP14.02□□□□□ -0.17
SKA3-206ENST00000475251 ZFP42Q96MM3 310 aa14.02□□□□□ -0.17
SKA3-206ENST00000475251 EIF2AQ9BY44 585 aaKnown RBP14.02□□□□□ -0.17
SKA3-206ENST00000475251 OSBPL6Q9BZF3 934 aa14.02□□□□□ -0.17
SKA3-206ENST00000475251 ZSWIM4Q9H7M6 989 aa14.02□□□□□ -0.17
SKA3-206ENST00000475251 KCNMB3Q9NPA1 279 aa14.02□□□□□ -0.17
SKA3-206ENST00000475251 FBXO4Q9UKT5 387 aa14.02□□□□□ -0.17
SKA3-206ENST00000475251 CDH7Q9ULB5 785 aa14.02□□□□□ -0.17
SKA3-206ENST00000475251 SNX14Q9Y5W7 946 aa14.02□□□□□ -0.17
SKA3-206ENST00000475251 DOCK8Q8NF50 2099 aa14.02□□□□□ -0.17
SKA3-206ENST00000475251 FANCMQ8IYD8 2048 aa14.02□□□□□ -0.17
SKA3-206ENST00000475251 KANSL1LA0AUZ9 987 aa14.01□□□□□ -0.17
SKA3-206ENST00000475251 LAMTOR5O43504 91 aa14.01□□□□□ -0.17
SKA3-206ENST00000475251 SLC37A4O43826 429 aa14.01□□□□□ -0.17
SKA3-206ENST00000475251 XYLBO75191 536 aa14.01□□□□□ -0.17
SKA3-206ENST00000475251 TADA2AO75478 443 aa14.01□□□□□ -0.17
SKA3-206ENST00000475251 IRX6P78412 446 aaPredicted RBP14.01□□□□□ -0.17
SKA3-206ENST00000475251 INF2Q27J81 1249 aa14.01□□□□□ -0.17
SKA3-206ENST00000475251 XKR9Q5GH70 373 aa14.01□□□□□ -0.17
SKA3-206ENST00000475251 PDXDC1Q6P996 788 aa14.01□□□□□ -0.17
SKA3-206ENST00000475251 NEK8Q86SG6 692 aa14.01□□□□□ -0.17
SKA3-206ENST00000475251 IFNLR1Q8IU57 520 aaPredicted RBP14.01□□□□□ -0.17
SKA3-206ENST00000475251 GLYCTKQ8IVS8 523 aa14.01□□□□□ -0.17
SKA3-206ENST00000475251 ZNF579Q8NAF0 562 aaKnown RBP14.01□□□□□ -0.17
SKA3-206ENST00000475251 APOL6Q9BWW8 343 aa14.01□□□□□ -0.17
SKA3-206ENST00000475251 GPR62Q9BZJ7 368 aa14.01□□□□□ -0.17
SKA3-206ENST00000475251 NCOA5Q9HCD5 579 aaKnown RBP14.01□□□□□ -0.17
SKA3-206ENST00000475251 BMP2KQ9NSY1 1161 aaPredicted RBP14.01□□□□□ -0.17
SKA3-206ENST00000475251 NCDNQ9UBB6 729 aa14.01□□□□□ -0.17
SKA3-206ENST00000475251 HES2Q9Y543 173 aa14.01□□□□□ -0.17
SKA3-206ENST00000475251 XBP1P17861 261 aa14□□□□□ -0.17
SKA3-206ENST00000475251 HOXA9P31269 272 aa14□□□□□ -0.17
SKA3-206ENST00000475251 GPC5P78333 572 aa14□□□□□ -0.17
SKA3-206ENST00000475251 MLF2Q15773 248 aaPredicted RBP14□□□□□ -0.17
SKA3-206ENST00000475251 PPM1LQ5SGD2 360 aa14□□□□□ -0.17
SKA3-206ENST00000475251 SLC27A1Q6PCB7 646 aa14□□□□□ -0.17
SKA3-206ENST00000475251 SLFN12Q8IYM2 578 aa14□□□□□ -0.17
SKA3-206ENST00000475251 SUMF1Q8NBK3 374 aa14□□□□□ -0.17
SKA3-206ENST00000475251 ATRIPQ8WXE1 791 aa14□□□□□ -0.17
SKA3-206ENST00000475251 CPB2Q96IY4 423 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms