RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 RSAD1Q9HA92 442 aa13.1□□□□□ -0.31
CLIP2-204ENST00000474962 MIOSQ9NXC5 875 aa13.1□□□□□ -0.31
CLIP2-204ENST00000474962 RCOR1Q9UKL0 485 aa13.1□□□□□ -0.31
CLIP2-204ENST00000474962 HCN4Q9Y3Q4 1203 aa13.1□□□□□ -0.31
CLIP2-204ENST00000474962 IPPQ9Y573 584 aa13.1□□□□□ -0.31
CLIP2-204ENST00000474962 HCFC2Q9Y5Z7 792 aa13.1□□□□□ -0.31
CLIP2-204ENST00000474962 MORC2Q9Y6X9 1032 aaPredicted RBP13.1□□□□□ -0.31
CLIP2-204ENST00000474962 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.09□□□□□ -0.31
CLIP2-204ENST00000474962 FSD2A1L4K1 749 aa13.09□□□□□ -0.31
CLIP2-204ENST00000474962 B4GALT5O43286 388 aa13.09□□□□□ -0.31
CLIP2-204ENST00000474962 CUTAO60888 179 aa13.09□□□□□ -0.31
CLIP2-204ENST00000474962 ERLIN2O94905 339 aa13.09□□□□□ -0.31
CLIP2-204ENST00000474962 WEE2P0C1S8 567 aa13.09□□□□□ -0.31
CLIP2-204ENST00000474962 ITGA4P13612 1032 aa13.09□□□□□ -0.31
CLIP2-204ENST00000474962 HOXB8P17481 243 aaPredicted RBP13.09□□□□□ -0.31
CLIP2-204ENST00000474962 ARF4P18085 180 aaPredicted RBP13.09□□□□□ -0.31
CLIP2-204ENST00000474962 MUTP22033 750 aa13.09□□□□□ -0.31
CLIP2-204ENST00000474962 SP100P23497 879 aaPredicted RBP13.09□□□□□ -0.31
CLIP2-204ENST00000474962 CDC25AP30304 524 aa13.09□□□□□ -0.31
CLIP2-204ENST00000474962 PLA2G5P39877 138 aa13.09□□□□□ -0.31
CLIP2-204ENST00000474962 MBTD1Q05BQ5 628 aa13.09□□□□□ -0.31
CLIP2-204ENST00000474962 NCBP1Q09161 790 aaKnown RBP13.09□□□□□ -0.31
CLIP2-204ENST00000474962 TFDP1Q14186 410 aa13.09□□□□□ -0.31
CLIP2-204ENST00000474962 HFE2Q6ZVN8 426 aa13.09□□□□□ -0.31
CLIP2-204ENST00000474962 TAS1R1Q7RTX1 841 aa13.09□□□□□ -0.31
CLIP2-204ENST00000474962 CABP7Q86V35 215 aa13.09□□□□□ -0.31
CLIP2-204ENST00000474962 CDR2LQ86X02 465 aaPredicted RBP13.09□□□□□ -0.31
CLIP2-204ENST00000474962 TMEM87AQ8NBN3 555 aa13.09□□□□□ -0.31
CLIP2-204ENST00000474962 FEZF2Q8TBJ5 459 aa13.09□□□□□ -0.31
CLIP2-204ENST00000474962 EDAQ92838 391 aa13.09□□□□□ -0.31
CLIP2-204ENST00000474962 CLIC6Q96NY7 704 aa13.09□□□□□ -0.31
CLIP2-204ENST00000474962 FAM193BQ96PV7 902 aaPredicted RBP13.09□□□□□ -0.31
CLIP2-204ENST00000474962 GAD1Q99259 594 aa13.09□□□□□ -0.31
CLIP2-204ENST00000474962 ZBP1Q9H171 429 aa13.09□□□□□ -0.31
CLIP2-204ENST00000474962 POLR3FQ9H1D9 316 aaPredicted RBP13.09□□□□□ -0.31
CLIP2-204ENST00000474962 POLD4Q9HCU8 107 aa13.09□□□□□ -0.31
CLIP2-204ENST00000474962 KANSL3Q9P2N6 904 aa13.09□□□□□ -0.31
CLIP2-204ENST00000474962 FBXO2Q9UK22 296 aaPredicted RBP13.09□□□□□ -0.31
CLIP2-204ENST00000474962 KIAA1024Q9UPX6 916 aa13.09□□□□□ -0.31
CLIP2-204ENST00000474962 FAN1Q9Y2M0 1017 aa13.09□□□□□ -0.31
CLIP2-204ENST00000474962 TCHHQ07283 1943 aa13.08□□□□□ -0.32
CLIP2-204ENST00000474962 ARL5CA6NH57 179 aa13.08□□□□□ -0.32
CLIP2-204ENST00000474962 PP2D1A8MPX8 630 aa13.08□□□□□ -0.32
CLIP2-204ENST00000474962 NRP1O14786 923 aa13.08□□□□□ -0.32
CLIP2-204ENST00000474962 SLC26A4O43511 780 aa13.08□□□□□ -0.32
CLIP2-204ENST00000474962 USO1O60763 962 aaKnown RBP13.08□□□□□ -0.32
CLIP2-204ENST00000474962 SSBP05455 408 aaKnown RBP eCLIP13.08□□□□□ -0.32
CLIP2-204ENST00000474962 SRGAP2BP0DMP2 458 aa13.08□□□□□ -0.32
CLIP2-204ENST00000474962 CTSAP10619 480 aa13.08□□□□□ -0.32
CLIP2-204ENST00000474962 EPCAMP16422 314 aa13.08□□□□□ -0.32
CLIP2-204ENST00000474962 AXLP30530 894 aa13.08□□□□□ -0.32
CLIP2-204ENST00000474962 BMS1Q14692 1282 aaKnown RBP13.08□□□□□ -0.32
CLIP2-204ENST00000474962 TPRNQ4KMQ1 711 aa13.08□□□□□ -0.32
CLIP2-204ENST00000474962 SPECC1Q5M775 1068 aa13.08□□□□□ -0.32
CLIP2-204ENST00000474962 NOTUMQ6P988 496 aa13.08□□□□□ -0.32
CLIP2-204ENST00000474962 POTEGQ6S5H5 508 aa13.08□□□□□ -0.32
CLIP2-204ENST00000474962 SLC22A17Q8WUG5 538 aa13.08□□□□□ -0.32
CLIP2-204ENST00000474962 LEO1Q8WVC0 666 aaPredicted RBP13.08□□□□□ -0.32
CLIP2-204ENST00000474962 RSPH1Q8WYR4 309 aa13.08□□□□□ -0.32
CLIP2-204ENST00000474962 CASP10Q92851 521 aa13.08□□□□□ -0.32
CLIP2-204ENST00000474962 ZFP42Q96MM3 310 aa13.08□□□□□ -0.32
CLIP2-204ENST00000474962 APOL6Q9BWW8 343 aa13.08□□□□□ -0.32
CLIP2-204ENST00000474962 ADAM7Q9H2U9 754 aa13.08□□□□□ -0.32
CLIP2-204ENST00000474962 FAM13BQ9NYF5 915 aa13.08□□□□□ -0.32
CLIP2-204ENST00000474962 DNM3Q9UQ16 869 aa13.08□□□□□ -0.32
CLIP2-204ENST00000474962 MUC6Q6W4X9 2439 aa13.07□□□□□ -0.32
CLIP2-204ENST00000474962 TTLL13PA6NNM8 815 aa13.07□□□□□ -0.32
CLIP2-204ENST00000474962 LILRB3O75022 631 aa13.07□□□□□ -0.32
CLIP2-204ENST00000474962 AKAP5P24588 427 aa13.07□□□□□ -0.32
CLIP2-204ENST00000474962 ZXDAP98168 799 aa13.07□□□□□ -0.32
CLIP2-204ENST00000474962 GRIN1Q05586 938 aa13.07□□□□□ -0.32
CLIP2-204ENST00000474962 PCBP1Q15365 356 aaKnown RBP eCLIP13.07□□□□□ -0.32
CLIP2-204ENST00000474962 ECM1Q16610 540 aa13.07□□□□□ -0.32
CLIP2-204ENST00000474962 COLGALT2Q8IYK4 626 aa13.07□□□□□ -0.32
CLIP2-204ENST00000474962 KCTD17Q8N5Z5 321 aa13.07□□□□□ -0.32
CLIP2-204ENST00000474962 CNNM3Q8NE01 707 aa13.07□□□□□ -0.32
CLIP2-204ENST00000474962 CHAMP1Q96JM3 812 aa13.07□□□□□ -0.32
CLIP2-204ENST00000474962 PLIN2Q99541 437 aa13.07□□□□□ -0.32
CLIP2-204ENST00000474962 NFKBIZQ9BYH8 718 aa13.07□□□□□ -0.32
CLIP2-204ENST00000474962 UBN1Q9NPG3 1134 aa13.07□□□□□ -0.32
CLIP2-204ENST00000474962 DDX19AQ9NUU7 478 aaKnown RBP13.07□□□□□ -0.32
CLIP2-204ENST00000474962 DBR1Q9UK59 544 aaKnown RBP13.07□□□□□ -0.32
CLIP2-204ENST00000474962 PCDHA7Q9UN72 937 aa13.07□□□□□ -0.32
CLIP2-204ENST00000474962 USP20Q9Y2K6 914 aa13.07□□□□□ -0.32
CLIP2-204ENST00000474962 ARIH1Q9Y4X5 557 aaPredicted RBP13.07□□□□□ -0.32
CLIP2-204ENST00000474962 IRAK3Q9Y616 596 aa13.07□□□□□ -0.32
CLIP2-204ENST00000474962 CNTNAP2Q9UHC6 1331 aa13.07□□□□□ -0.32
CLIP2-204ENST00000474962 TECTAO75443 2155 aa13.06□□□□□ -0.32
CLIP2-204ENST00000474962 A0A1B0GUA9 196 aa13.06□□□□□ -0.32
CLIP2-204ENST00000474962 ARHGEF35A5YM69 484 aa13.06□□□□□ -0.32
CLIP2-204ENST00000474962 LRRIQ4A6NIV6 560 aa13.06□□□□□ -0.32
CLIP2-204ENST00000474962 F8W810 466 aa13.06□□□□□ -0.32
CLIP2-204ENST00000474962 C2CD2LO14523 706 aa13.06□□□□□ -0.32
CLIP2-204ENST00000474962 NPTXRO95502 500 aa13.06□□□□□ -0.32
CLIP2-204ENST00000474962 CNPP09543 421 aaKnown RBP13.06□□□□□ -0.32
CLIP2-204ENST00000474962 MLH1P40692 756 aa13.06□□□□□ -0.32
CLIP2-204ENST00000474962 OR1G1P47890 313 aa13.06□□□□□ -0.32
CLIP2-204ENST00000474962 SCNN1GP51170 649 aa13.06□□□□□ -0.32
CLIP2-204ENST00000474962 GIT2Q14161 759 aa13.06□□□□□ -0.32
CLIP2-204ENST00000474962 PTPN14Q15678 1187 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms