RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 RAPGEF1Q13905 1077 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 E2F5Q15329 346 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 SLC4A8Q2Y0W8 1093 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 C6orf118Q5T5N4 469 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 DRICH1Q6PGQ1 229 aaPredicted RBP4.42□□□□□ -1.7
USP16-205ENST00000474835 ATG14Q6ZNE5 492 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 TRMT10CQ7L0Y3 403 aaKnown RBP4.42□□□□□ -1.7
USP16-205ENST00000474835 CROCCP2Q86T23 111 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 TTC8Q8TAM2 541 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 ALG3Q92685 438 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 AKT1S1Q96B36 256 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 TSC22D3Q99576 134 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 MCMBPQ9BTE3 642 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 HGH1Q9BTY7 390 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 BRIP1Q9BX63 1249 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 PITPNM2Q9BZ72 1349 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 PCDH11YQ9BZA8 1340 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 KIAA1683Q9H0B3 1180 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 ZMYND12Q9H0C1 365 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 ANAPC1Q9H1A4 1944 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 CNNM2Q9H8M5 875 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 IL17RBQ9NRM6 502 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 CEP126Q9P2H0 1117 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 DNM3Q9UQ16 869 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 FSCN2O14926 492 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 SNHG28P0DPA3 235 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 PTPN4P29074 926 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 SLC5A2P31639 672 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 CTNNA1P35221 906 aaKnown RBP4.42□□□□□ -1.7
USP16-205ENST00000474835 VHLP40337 213 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 TRPC1P48995 793 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 ACTR3P61158 418 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 AKAP17AQ02040 695 aaKnown RBP4.42□□□□□ -1.7
USP16-205ENST00000474835 MCL1Q07820 350 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 PTGDRQ13258 359 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 PTK6Q13882 451 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 EDRF1Q3B7T1 1238 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 DBX2Q6ZNG2 339 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 CLNKQ7Z7G1 428 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 IFNL3Q8IZI9 196 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 OGFOD1Q8N543 542 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 WDR60Q8WVS4 1066 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 SNX27Q96L92 541 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 PRMT1Q99873 361 aaKnown RBP4.42□□□□□ -1.7
USP16-205ENST00000474835 VPS16Q9H269 839 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 ESF1Q9H501 851 aaKnown RBP4.42□□□□□ -1.7
USP16-205ENST00000474835 COL4A2P08572 1712 aa4.42□□□□□ -1.7
USP16-205ENST00000474835 IGKV6D-41A0A0C4DH26 115 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 CYTH3O43739 400 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 FAM189A1O60320 539 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 ADAM23O75077 832 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 SNNO75324 88 aaPredicted RBP4.41□□□□□ -1.7
USP16-205ENST00000474835 KIAA0754O94854 1291 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 GH1P01241 217 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 ANXA1P04083 346 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 ATP5BP06576 529 aaKnown RBP4.41□□□□□ -1.7
USP16-205ENST00000474835 PDE6AP16499 860 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 ZAP70P43403 619 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 SLC34A1Q06495 639 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 USP4Q13107 963 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 GNL2Q13823 731 aaKnown RBP4.41□□□□□ -1.7
USP16-205ENST00000474835 NONOQ15233 471 aaKnown RBP eCLIP4.41□□□□□ -1.7
USP16-205ENST00000474835 AAGABQ6PD74 315 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 DSTYKQ6XUX3 929 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 TRABD2AQ86V40 505 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 RIBC1Q8N443 379 aaPredicted RBP4.41□□□□□ -1.7
USP16-205ENST00000474835 PLEKHO2Q8TD55 490 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 SP7Q8TDD2 431 aaPredicted RBP4.41□□□□□ -1.7
USP16-205ENST00000474835 TRIB2Q92519 343 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 ZNF75CPQ92670 426 aaPredicted RBP4.41□□□□□ -1.7
USP16-205ENST00000474835 LENG1Q96BZ8 264 aaPredicted RBP4.41□□□□□ -1.7
USP16-205ENST00000474835 AGBL1Q96MI9 1066 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 NOX5Q96PH1 765 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 BTBD9Q96Q07 612 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 FGFBP2Q9BYJ0 223 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 USP40Q9NVE5 1235 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 MAD2L2Q9UI95 211 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 NOVA2Q9UNW9 492 aaKnown RBP4.41□□□□□ -1.7
USP16-205ENST00000474835 CYP3A7-CYP3A51PA0A087WV96 503 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 SPDYE2BA6NHP3 402 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 DLGAP1O14490 977 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 FBXO21O94952 628 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 PRKCGP05129 697 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 TMEM253P0C7T8 217 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 SPDYE6P0CI01 402 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 COL6A2P12110 1019 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 CYP3A7P24462 503 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 PCSK6P29122 969 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 CCNFP41002 786 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 PMS2P54278 862 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 SSRP1Q08945 709 aaKnown RBP4.41□□□□□ -1.7
USP16-205ENST00000474835 SPDYE2Q495Y8 402 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 CCNJQ5T5M9 372 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 GALNT17Q6IS24 598 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 B3GNT9Q6UX72 402 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 NFXL1Q6ZNB6 911 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 CCNJLQ8IV13 435 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 XAGE3Q8WTP9 111 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 KRT12Q99456 494 aa4.41□□□□□ -1.7
USP16-205ENST00000474835 HERPUD2Q9BSE4 406 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms