RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 GRM5P41594 1212 aa18.57■□□□□ 0.56
SCAF11-206ENST00000474828 AFMP43652 599 aa18.57■□□□□ 0.56
SCAF11-206ENST00000474828 UBE2HP62256 183 aa18.57■□□□□ 0.56
SCAF11-206ENST00000474828 ASIC1P78348 528 aa18.57■□□□□ 0.56
SCAF11-206ENST00000474828 BMT2Q1RMZ1 405 aa18.57■□□□□ 0.56
SCAF11-206ENST00000474828 ZC2HC1CQ53FD0 456 aaPredicted RBP18.57■□□□□ 0.56
SCAF11-206ENST00000474828 XKR4Q5GH76 650 aa18.57■□□□□ 0.56
SCAF11-206ENST00000474828 L1TD1Q5T7N2 865 aaKnown RBP18.57■□□□□ 0.56
SCAF11-206ENST00000474828 SLC39A4Q6P5W5 647 aa18.57■□□□□ 0.56
SCAF11-206ENST00000474828 GLB1LQ6UWU2 654 aa18.57■□□□□ 0.56
SCAF11-206ENST00000474828 APBB1IPQ7Z5R6 666 aaPredicted RBP18.57■□□□□ 0.56
SCAF11-206ENST00000474828 GRAMD1CQ8IYS0 662 aa18.57■□□□□ 0.56
SCAF11-206ENST00000474828 ZNF507Q8TCN5 953 aa18.57■□□□□ 0.56
SCAF11-206ENST00000474828 LPPQ93052 612 aa18.57■□□□□ 0.56
SCAF11-206ENST00000474828 ADPGKQ9BRR6 497 aa18.57■□□□□ 0.56
SCAF11-206ENST00000474828 PLVAPQ9BX97 442 aa18.57■□□□□ 0.56
SCAF11-206ENST00000474828 MRPL9Q9BYD2 267 aaKnown RBP18.57■□□□□ 0.56
SCAF11-206ENST00000474828 HAPLN2Q9GZV7 340 aa18.57■□□□□ 0.56
SCAF11-206ENST00000474828 ZHX3Q9H4I2 956 aa18.57■□□□□ 0.56
SCAF11-206ENST00000474828 MRPL44Q9H9J2 332 aaKnown RBP18.57■□□□□ 0.56
SCAF11-206ENST00000474828 RSAD1Q9HA92 442 aa18.57■□□□□ 0.56
SCAF11-206ENST00000474828 RWDD3Q9Y3V2 267 aa18.57■□□□□ 0.56
SCAF11-206ENST00000474828 RALGAPA2Q2PPJ7 1873 aa18.56■□□□□ 0.56
SCAF11-206ENST00000474828 EIF3DO15371 548 aaKnown RBP eCLIP18.56■□□□□ 0.56
SCAF11-206ENST00000474828 RB1P06400 928 aa18.56■□□□□ 0.56
SCAF11-206ENST00000474828 ITGA4P13612 1032 aa18.56■□□□□ 0.56
SCAF11-206ENST00000474828 LIG1P18858 919 aa18.56■□□□□ 0.56
SCAF11-206ENST00000474828 HOXD13P35453 343 aa18.56■□□□□ 0.56
SCAF11-206ENST00000474828 BMPR1AP36894 532 aa18.56■□□□□ 0.56
SCAF11-206ENST00000474828 POU5F1Q01860 360 aaKnown RBP18.56■□□□□ 0.56
SCAF11-206ENST00000474828 PSMD2Q13200 908 aa18.56■□□□□ 0.56
SCAF11-206ENST00000474828 NOMO2Q5JPE7 1267 aa18.56■□□□□ 0.56
SCAF11-206ENST00000474828 FAM26FQ5R3K3 315 aa18.56■□□□□ 0.56
SCAF11-206ENST00000474828 SPRED2Q7Z698 418 aa18.56■□□□□ 0.56
SCAF11-206ENST00000474828 HACE1Q8IYU2 909 aa18.56■□□□□ 0.56
SCAF11-206ENST00000474828 LRRC43Q8N309 656 aa18.56■□□□□ 0.56
SCAF11-206ENST00000474828 HELQQ8TDG4 1101 aa18.56■□□□□ 0.56
SCAF11-206ENST00000474828 BLZF1Q9H2G9 400 aa18.56■□□□□ 0.56
SCAF11-206ENST00000474828 HES2Q9Y543 173 aa18.56■□□□□ 0.56
SCAF11-206ENST00000474828 A0A0B4J269 797 aa18.55■□□□□ 0.56
SCAF11-206ENST00000474828 ARL5CA6NH57 179 aa18.55■□□□□ 0.56
SCAF11-206ENST00000474828 TBKBP1A7MCY6 615 aa18.55■□□□□ 0.56
SCAF11-206ENST00000474828 DLL1O00548 723 aa18.55■□□□□ 0.56
SCAF11-206ENST00000474828 NR1I2O75469 434 aa18.55■□□□□ 0.56
SCAF11-206ENST00000474828 ADRB2P07550 413 aa18.55■□□□□ 0.56
SCAF11-206ENST00000474828 MYBP10242 640 aa18.55■□□□□ 0.56
SCAF11-206ENST00000474828 AFF1P51825 1210 aaKnown RBP18.55■□□□□ 0.56
SCAF11-206ENST00000474828 KCNA1Q09470 495 aa18.55■□□□□ 0.56
SCAF11-206ENST00000474828 KCNB1Q14721 858 aa18.55■□□□□ 0.56
SCAF11-206ENST00000474828 GRIN2CQ14957 1233 aa18.55■□□□□ 0.56
SCAF11-206ENST00000474828 ALKAL1Q6UXT8 129 aa18.55■□□□□ 0.56
SCAF11-206ENST00000474828 TMEM192Q8IY95 271 aa18.55■□□□□ 0.56
SCAF11-206ENST00000474828 TMEM174Q8WUU8 243 aa18.55■□□□□ 0.56
SCAF11-206ENST00000474828 P2RX5Q93086 422 aa18.55■□□□□ 0.56
SCAF11-206ENST00000474828 ZBTB45Q96K62 511 aaPredicted RBP18.55■□□□□ 0.56
SCAF11-206ENST00000474828 GUCD1Q96NT3 240 aa18.55■□□□□ 0.56
SCAF11-206ENST00000474828 TRIM6Q9C030 488 aaPredicted RBP18.55■□□□□ 0.56
SCAF11-206ENST00000474828 TYW1Q9NV66 732 aaKnown RBP18.55■□□□□ 0.56
SCAF11-206ENST00000474828 TBC1D13Q9NVG8 400 aa18.55■□□□□ 0.56
SCAF11-206ENST00000474828 KANSL3Q9P2N6 904 aa18.55■□□□□ 0.56
SCAF11-206ENST00000474828 STXBP5LQ9Y2K9 1186 aa18.55■□□□□ 0.56
SCAF11-206ENST00000474828 UBE4BO95155 1302 aa18.54■□□□□ 0.56
SCAF11-206ENST00000474828 CARNS1A5YM72 827 aa18.54■□□□□ 0.56
SCAF11-206ENST00000474828 CLDN3O15551 220 aa18.54■□□□□ 0.56
SCAF11-206ENST00000474828 LPXNO60711 386 aa18.54■□□□□ 0.56
SCAF11-206ENST00000474828 RHOBTB3O94955 611 aa18.54■□□□□ 0.56
SCAF11-206ENST00000474828 ADSSP30520 456 aa18.54■□□□□ 0.56
SCAF11-206ENST00000474828 DSC1Q08554 894 aa18.54■□□□□ 0.56
SCAF11-206ENST00000474828 NOLC1Q14978 699 aaKnown RBP eCLIP18.54■□□□□ 0.56
SCAF11-206ENST00000474828 ZNF568Q3ZCX4 644 aa18.54■□□□□ 0.56
SCAF11-206ENST00000474828 EPC2Q52LR7 807 aa18.54■□□□□ 0.56
SCAF11-206ENST00000474828 ABI1Q8IZP0 508 aa18.54■□□□□ 0.56
SCAF11-206ENST00000474828 GLIS3Q8NEA6 775 aa18.54■□□□□ 0.56
SCAF11-206ENST00000474828 HPS3Q969F9 1004 aa18.54■□□□□ 0.56
SCAF11-206ENST00000474828 ACCSQ96QU6 501 aa18.54■□□□□ 0.56
SCAF11-206ENST00000474828 C17orf80Q9BSJ5 609 aa18.54■□□□□ 0.56
SCAF11-206ENST00000474828 TMEM206Q9H813 350 aa18.54■□□□□ 0.56
SCAF11-206ENST00000474828 EPOPA6NHQ4 379 aa18.53■□□□□ 0.56
SCAF11-206ENST00000474828 ANKRD63C9JTQ0 380 aa18.53■□□□□ 0.56
SCAF11-206ENST00000474828 H3BNC9 293 aa18.53■□□□□ 0.56
SCAF11-206ENST00000474828 HNRNPDLO14979 420 aaKnown RBP18.53■□□□□ 0.56
SCAF11-206ENST00000474828 MEFVO15553 781 aaPredicted RBP18.53■□□□□ 0.56
SCAF11-206ENST00000474828 GCNT3O95395 438 aa18.53■□□□□ 0.56
SCAF11-206ENST00000474828 RPN1P04843 607 aaKnown RBP18.53■□□□□ 0.56
SCAF11-206ENST00000474828 PRR29P0C7W0 189 aa18.53■□□□□ 0.56
SCAF11-206ENST00000474828 LIG4P49917 911 aa18.53■□□□□ 0.56
SCAF11-206ENST00000474828 POSTNQ15063 836 aa18.53■□□□□ 0.56
SCAF11-206ENST00000474828 NAB2Q15742 525 aa18.53■□□□□ 0.56
SCAF11-206ENST00000474828 KYAT1Q16773 422 aa18.53■□□□□ 0.56
SCAF11-206ENST00000474828 KMT5BQ4FZB7 885 aa18.53■□□□□ 0.56
SCAF11-206ENST00000474828 SLFN12LQ6IEE8 588 aa18.53■□□□□ 0.56
SCAF11-206ENST00000474828 STXBP4Q6ZWJ1 553 aa18.53■□□□□ 0.56
SCAF11-206ENST00000474828 RNF169Q8NCN4 708 aa18.53■□□□□ 0.56
SCAF11-206ENST00000474828 SCFD1Q8WVM8 642 aa18.53■□□□□ 0.56
SCAF11-206ENST00000474828 CCDC34Q96HJ3 373 aa18.53■□□□□ 0.56
SCAF11-206ENST00000474828 MIOSQ9NXC5 875 aa18.53■□□□□ 0.56
SCAF11-206ENST00000474828 SNTG2Q9NY99 539 aa18.53■□□□□ 0.56
SCAF11-206ENST00000474828 TBC1D7Q9P0N9 293 aa18.53■□□□□ 0.56
SCAF11-206ENST00000474828 EXOC7Q9UPT5 735 aa18.53■□□□□ 0.56
SCAF11-206ENST00000474828 KIAA1671Q9BY89 1806 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms