RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 SFXN1Q9H9B4 322 aa22.51■■□□□ 1.19
PDLIM4-206ENST00000474421 TSHZ2Q9NRE2 1034 aa22.51■■□□□ 1.19
PDLIM4-206ENST00000474421 MARCH5Q9NX47 278 aa22.51■■□□□ 1.19
PDLIM4-206ENST00000474421 TMEM221A6NGB7 291 aa22.5■■□□□ 1.19
PDLIM4-206ENST00000474421 SPDYE4A6NLX3 237 aa22.5■■□□□ 1.19
PDLIM4-206ENST00000474421 M0R296 226 aa22.5■■□□□ 1.19
PDLIM4-206ENST00000474421 LILRB3O75022 631 aa22.5■■□□□ 1.19
PDLIM4-206ENST00000474421 CNPP09543 421 aaKnown RBP22.5■■□□□ 1.19
PDLIM4-206ENST00000474421 GRIK3Q13003 919 aa22.5■■□□□ 1.19
PDLIM4-206ENST00000474421 TMEM132AQ24JP5 1023 aa22.5■■□□□ 1.19
PDLIM4-206ENST00000474421 ELMSAN1Q6PJG2 1045 aa22.5■■□□□ 1.19
PDLIM4-206ENST00000474421 DEPTORQ8TB45 409 aa22.5■■□□□ 1.19
PDLIM4-206ENST00000474421 IFT74Q96LB3 600 aa22.5■■□□□ 1.19
PDLIM4-206ENST00000474421 FBXL18Q96ME1 805 aa22.5■■□□□ 1.19
PDLIM4-206ENST00000474421 RPS6KC1Q96S38 1066 aa22.5■■□□□ 1.19
PDLIM4-206ENST00000474421 POMKQ9H5K3 350 aa22.5■■□□□ 1.19
PDLIM4-206ENST00000474421 UPF2Q9HAU5 1272 aaKnown RBP22.5■■□□□ 1.19
PDLIM4-206ENST00000474421 MIOSQ9NXC5 875 aa22.5■■□□□ 1.19
PDLIM4-206ENST00000474421 PARP2Q9UGN5 583 aa22.5■■□□□ 1.19
PDLIM4-206ENST00000474421 DPP7Q9UHL4 492 aa22.5■■□□□ 1.19
PDLIM4-206ENST00000474421 ADH1AP07327 375 aa22.49■■□□□ 1.19
PDLIM4-206ENST00000474421 AKAP5P24588 427 aa22.49■■□□□ 1.19
PDLIM4-206ENST00000474421 GLUD2P49448 558 aa22.49■■□□□ 1.19
PDLIM4-206ENST00000474421 EFNA5P52803 228 aa22.49■■□□□ 1.19
PDLIM4-206ENST00000474421 SIGLEC14Q08ET2 396 aa22.49■■□□□ 1.19
PDLIM4-206ENST00000474421 PTGDRQ13258 359 aa22.49■■□□□ 1.19
PDLIM4-206ENST00000474421 PRPF4BQ13523 1007 aaKnown RBP22.49■■□□□ 1.19
PDLIM4-206ENST00000474421 PTPN21Q16825 1174 aa22.49■■□□□ 1.19
PDLIM4-206ENST00000474421 ZBTB33Q86T24 672 aa22.49■■□□□ 1.19
PDLIM4-206ENST00000474421 CDR2LQ86X02 465 aaPredicted RBP22.49■■□□□ 1.19
PDLIM4-206ENST00000474421 C12orf76Q8N812 135 aaPredicted RBP22.49■■□□□ 1.19
PDLIM4-206ENST00000474421 KIFAP3Q92845 792 aa22.49■■□□□ 1.19
PDLIM4-206ENST00000474421 ADPGKQ9BRR6 497 aa22.49■■□□□ 1.19
PDLIM4-206ENST00000474421 ZNF318Q5VUA4 2279 aa22.48■■□□□ 1.19
PDLIM4-206ENST00000474421 ACKR2O00590 384 aa22.48■■□□□ 1.19
PDLIM4-206ENST00000474421 PRKCBP05771 671 aa22.48■■□□□ 1.19
PDLIM4-206ENST00000474421 TOB1P50616 345 aaPredicted RBP22.48■■□□□ 1.19
PDLIM4-206ENST00000474421 CLCN4P51793 760 aa22.48■■□□□ 1.19
PDLIM4-206ENST00000474421 NBR1Q14596 966 aa22.48■■□□□ 1.19
PDLIM4-206ENST00000474421 RNF168Q8IYW5 571 aaPredicted RBP22.48■■□□□ 1.19
PDLIM4-206ENST00000474421 IGSF22Q8N9C0 903 aa22.48■■□□□ 1.19
PDLIM4-206ENST00000474421 GSTCDQ8NEC7 633 aa22.48■■□□□ 1.19
PDLIM4-206ENST00000474421 PBXIP1Q96AQ6 731 aa22.48■■□□□ 1.19
PDLIM4-206ENST00000474421 BHMT2Q9H2M3 363 aa22.48■■□□□ 1.19
PDLIM4-206ENST00000474421 KIAA1024Q9UPX6 916 aa22.48■■□□□ 1.19
PDLIM4-206ENST00000474421 USTQ9Y2C2 406 aa22.48■■□□□ 1.19
PDLIM4-206ENST00000474421 MYO10Q9HD67 2058 aa22.47■■□□□ 1.19
PDLIM4-206ENST00000474421 C2CD2LO14523 706 aa22.47■■□□□ 1.19
PDLIM4-206ENST00000474421 EFEMP2O95967 443 aa22.47■■□□□ 1.19
PDLIM4-206ENST00000474421 SP100P23497 879 aaPredicted RBP22.47■■□□□ 1.19
PDLIM4-206ENST00000474421 PRPHP41219 470 aa22.47■■□□□ 1.19
PDLIM4-206ENST00000474421 KRT79Q5XKE5 535 aa22.47■■□□□ 1.19
PDLIM4-206ENST00000474421 APBB1IPQ7Z5R6 666 aaPredicted RBP22.47■■□□□ 1.19
PDLIM4-206ENST00000474421 GPR65Q8IYL9 337 aa22.47■■□□□ 1.19
PDLIM4-206ENST00000474421 SNX29Q8TEQ0 813 aa22.47■■□□□ 1.19
PDLIM4-206ENST00000474421 BSNDQ8WZ55 320 aa22.47■■□□□ 1.19
PDLIM4-206ENST00000474421 CCDC113Q9H0I3 377 aa22.47■■□□□ 1.19
PDLIM4-206ENST00000474421 PDZD7Q9H5P4 517 aa22.47■■□□□ 1.19
PDLIM4-206ENST00000474421 DDX19AQ9NUU7 478 aaKnown RBP22.47■■□□□ 1.19
PDLIM4-206ENST00000474421 CDH22Q9UJ99 828 aa22.47■■□□□ 1.19
PDLIM4-206ENST00000474421 PCDHB6Q9Y5E3 794 aa22.47■■□□□ 1.19
PDLIM4-206ENST00000474421 DSG1Q02413 1049 aa22.46■■□□□ 1.19
PDLIM4-206ENST00000474421 ECM1Q16610 540 aa22.46■■□□□ 1.19
PDLIM4-206ENST00000474421 KIAA0319Q5VV43 1072 aa22.46■■□□□ 1.19
PDLIM4-206ENST00000474421 TMC5Q6UXY8 1006 aa22.46■■□□□ 1.19
PDLIM4-206ENST00000474421 DTHD1Q6ZMT9 781 aa22.46■■□□□ 1.19
PDLIM4-206ENST00000474421 GPR149Q86SP6 731 aa22.46■■□□□ 1.19
PDLIM4-206ENST00000474421 PLCD3Q8N3E9 789 aa22.46■■□□□ 1.19
PDLIM4-206ENST00000474421 TDRD5Q8NAT2 981 aaKnown RBP22.46■■□□□ 1.19
PDLIM4-206ENST00000474421 RXFP1Q9HBX9 757 aa22.46■■□□□ 1.19
PDLIM4-206ENST00000474421 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.46■■□□□ 1.19
PDLIM4-206ENST00000474421 KLK14Q9P0G3 267 aa22.46■■□□□ 1.19
PDLIM4-206ENST00000474421 DNM3Q9UQ16 869 aa22.46■■□□□ 1.19
PDLIM4-206ENST00000474421 C2CD4DB7Z1M9 353 aa22.45■■□□□ 1.18
PDLIM4-206ENST00000474421 C1RP00736 705 aa22.45■■□□□ 1.18
PDLIM4-206ENST00000474421 WEE2P0C1S8 567 aa22.45■■□□□ 1.18
PDLIM4-206ENST00000474421 MCM2P49736 904 aa22.45■■□□□ 1.18
PDLIM4-206ENST00000474421 CREMQ03060 361 aa22.45■■□□□ 1.18
PDLIM4-206ENST00000474421 TUSC3Q13454 348 aa22.45■■□□□ 1.18
PDLIM4-206ENST00000474421 USP41Q3LFD5 358 aa22.45■■□□□ 1.18
PDLIM4-206ENST00000474421 DCAF4L1Q3SXM0 396 aa22.45■■□□□ 1.18
PDLIM4-206ENST00000474421 RILPL1Q5EBL4 403 aa22.45■■□□□ 1.18
PDLIM4-206ENST00000474421 MCTP1Q6DN14 999 aa22.45■■□□□ 1.18
PDLIM4-206ENST00000474421 FUT10Q6P4F1 479 aa22.45■■□□□ 1.18
PDLIM4-206ENST00000474421 C15orf39Q6ZRI6 1047 aa22.45■■□□□ 1.18
PDLIM4-206ENST00000474421 TAS1R1Q7RTX1 841 aa22.45■■□□□ 1.18
PDLIM4-206ENST00000474421 SUGP1Q8IWZ8 645 aaKnown RBP22.45■■□□□ 1.18
PDLIM4-206ENST00000474421 UBALD2Q8IYN6 164 aa22.45■■□□□ 1.18
PDLIM4-206ENST00000474421 ZDHHC14Q8IZN3 488 aa22.45■■□□□ 1.18
PDLIM4-206ENST00000474421 CHST7Q9NS84 486 aa22.45■■□□□ 1.18
PDLIM4-206ENST00000474421 ADAM28Q9UKQ2 775 aa22.45■■□□□ 1.18
PDLIM4-206ENST00000474421 TEX28O15482 410 aa22.44■■□□□ 1.18
PDLIM4-206ENST00000474421 TADA2AO75478 443 aa22.44■■□□□ 1.18
PDLIM4-206ENST00000474421 GLUD1P00367 558 aa22.44■■□□□ 1.18
PDLIM4-206ENST00000474421 LIG1P18858 919 aa22.44■■□□□ 1.18
PDLIM4-206ENST00000474421 MTMR3Q13615 1198 aa22.44■■□□□ 1.18
PDLIM4-206ENST00000474421 CYP26C1Q6V0L0 522 aa22.44■■□□□ 1.18
PDLIM4-206ENST00000474421 PHLPP2Q6ZVD8 1323 aa22.44■■□□□ 1.18
PDLIM4-206ENST00000474421 CMASQ8NFW8 434 aaPredicted RBP22.44■■□□□ 1.18
PDLIM4-206ENST00000474421 ACSF2Q96CM8 615 aaPredicted RBP22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms