RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 DNAJB4Q9UDY4 337 aa20.52■□□□□ 0.88
CCDC171-206ENST00000474193 SSX2IPQ9Y2D8 614 aa20.52■□□□□ 0.88
CCDC171-206ENST00000474193 SLC26A4O43511 780 aa20.51■□□□□ 0.87
CCDC171-206ENST00000474193 HOXB8P17481 243 aaPredicted RBP20.51■□□□□ 0.87
CCDC171-206ENST00000474193 LONP1P36776 959 aaKnown RBP20.51■□□□□ 0.87
CCDC171-206ENST00000474193 MLH1P40692 756 aa20.51■□□□□ 0.87
CCDC171-206ENST00000474193 OR1G1P47890 313 aa20.51■□□□□ 0.87
CCDC171-206ENST00000474193 SLC11A1P49279 550 aa20.51■□□□□ 0.87
CCDC171-206ENST00000474193 DMP1Q13316 513 aaPredicted RBP20.51■□□□□ 0.87
CCDC171-206ENST00000474193 IL17AQ16552 155 aa20.51■□□□□ 0.87
CCDC171-206ENST00000474193 KRI1Q8N9T8 703 aaKnown RBP20.51■□□□□ 0.87
CCDC171-206ENST00000474193 CASP10Q92851 521 aa20.51■□□□□ 0.87
CCDC171-206ENST00000474193 COLEC11Q9BWP8 271 aa20.51■□□□□ 0.87
CCDC171-206ENST00000474193 SCAND2PQ9GZW5 306 aaPredicted RBP20.51■□□□□ 0.87
CCDC171-206ENST00000474193 HES2Q9Y543 173 aa20.51■□□□□ 0.87
CCDC171-206ENST00000474193 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.5■□□□□ 0.87
CCDC171-206ENST00000474193 C2orf71A6NGG8 1288 aa20.5■□□□□ 0.87
CCDC171-206ENST00000474193 HIDE1A8MVS5 230 aa20.5■□□□□ 0.87
CCDC171-206ENST00000474193 NRP1O14786 923 aa20.5■□□□□ 0.87
CCDC171-206ENST00000474193 PPP6R2O75170 966 aa20.5■□□□□ 0.87
CCDC171-206ENST00000474193 DDHD2O94830 711 aa20.5■□□□□ 0.87
CCDC171-206ENST00000474193 CTSAP10619 480 aa20.5■□□□□ 0.87
CCDC171-206ENST00000474193 SMTNP53814 917 aa20.5■□□□□ 0.87
CCDC171-206ENST00000474193 TPRNQ4KMQ1 711 aa20.5■□□□□ 0.87
CCDC171-206ENST00000474193 TMEM184AQ6ZMB5 413 aa20.5■□□□□ 0.87
CCDC171-206ENST00000474193 CABP7Q86V35 215 aa20.5■□□□□ 0.87
CCDC171-206ENST00000474193 CDR2LQ86X02 465 aaPredicted RBP20.5■□□□□ 0.87
CCDC171-206ENST00000474193 ADHFE1Q8IWW8 467 aa20.5■□□□□ 0.87
CCDC171-206ENST00000474193 BSNDQ8WZ55 320 aa20.5■□□□□ 0.87
CCDC171-206ENST00000474193 MSLNLQ96KJ4 702 aa20.5■□□□□ 0.87
CCDC171-206ENST00000474193 SPATA32Q96LK8 384 aa20.5■□□□□ 0.87
CCDC171-206ENST00000474193 EMILIN2Q9BXX0 1053 aa20.5■□□□□ 0.87
CCDC171-206ENST00000474193 RNF39Q9H2S5 420 aa20.5■□□□□ 0.87
CCDC171-206ENST00000474193 NXF3Q9H4D5 531 aaKnown RBP20.5■□□□□ 0.87
CCDC171-206ENST00000474193 CLEC1BQ9P126 229 aa20.5■□□□□ 0.87
CCDC171-206ENST00000474193 BARX2Q9UMQ3 279 aaPredicted RBP20.5■□□□□ 0.87
CCDC171-206ENST00000474193 SRPRBQ9Y5M8 271 aaKnown RBP20.5■□□□□ 0.87
CCDC171-206ENST00000474193 MORC2Q9Y6X9 1032 aaPredicted RBP20.5■□□□□ 0.87
CCDC171-206ENST00000474193 ATG2AQ2TAZ0 1938 aa20.5■□□□□ 0.87
CCDC171-206ENST00000474193 VCANP13611 3396 aa20.5■□□□□ 0.87
CCDC171-206ENST00000474193 ZMYM2Q9UBW7 1377 aa20.49■□□□□ 0.87
CCDC171-206ENST00000474193 INPPL1O15357 1258 aa20.49■□□□□ 0.87
CCDC171-206ENST00000474193 AKAP5P24588 427 aa20.49■□□□□ 0.87
CCDC171-206ENST00000474193 ME1P48163 572 aa20.49■□□□□ 0.87
CCDC171-206ENST00000474193 SCNN1GP51170 649 aa20.49■□□□□ 0.87
CCDC171-206ENST00000474193 PEX3P56589 373 aa20.49■□□□□ 0.87
CCDC171-206ENST00000474193 DCAF4L1Q3SXM0 396 aa20.49■□□□□ 0.87
CCDC171-206ENST00000474193 HYIQ5T013 277 aa20.49■□□□□ 0.87
CCDC171-206ENST00000474193 RINT1Q6NUQ1 792 aa20.49■□□□□ 0.87
CCDC171-206ENST00000474193 LLGL2Q6P1M3 1020 aa20.49■□□□□ 0.87
CCDC171-206ENST00000474193 PPFIBP1Q86W92 1011 aa20.49■□□□□ 0.87
CCDC171-206ENST00000474193 SMRP1Q8NCR6 262 aa20.49■□□□□ 0.87
CCDC171-206ENST00000474193 ZBP1Q9H171 429 aa20.49■□□□□ 0.87
CCDC171-206ENST00000474193 POLD4Q9HCU8 107 aa20.49■□□□□ 0.87
CCDC171-206ENST00000474193 KMT5AQ9NQR1 393 aa20.49■□□□□ 0.87
CCDC171-206ENST00000474193 KCND2Q9NZV8 630 aa20.49■□□□□ 0.87
CCDC171-206ENST00000474193 IRAK3Q9Y616 596 aa20.49■□□□□ 0.87
CCDC171-206ENST00000474193 HIP1RO75146 1068 aa20.48■□□□□ 0.87
CCDC171-206ENST00000474193 ALADP13716 330 aa20.48■□□□□ 0.87
CCDC171-206ENST00000474193 TXLNAP40222 546 aa20.48■□□□□ 0.87
CCDC171-206ENST00000474193 GRIK3Q13003 919 aa20.48■□□□□ 0.87
CCDC171-206ENST00000474193 KIAA1841Q6NSI8 718 aa20.48■□□□□ 0.87
CCDC171-206ENST00000474193 CES5AQ6NT32 575 aa20.48■□□□□ 0.87
CCDC171-206ENST00000474193 SYT2Q8N9I0 419 aaPredicted RBP20.48■□□□□ 0.87
CCDC171-206ENST00000474193 ZFP42Q96MM3 310 aa20.48■□□□□ 0.87
CCDC171-206ENST00000474193 PLIN2Q99541 437 aa20.48■□□□□ 0.87
CCDC171-206ENST00000474193 MMTAG2Q9BU76 263 aaKnown RBP20.48■□□□□ 0.87
CCDC171-206ENST00000474193 TMEM134Q9H6X4 195 aa20.48■□□□□ 0.87
CCDC171-206ENST00000474193 MRPL17Q9NRX2 175 aaKnown RBP20.48■□□□□ 0.87
CCDC171-206ENST00000474193 PRG3Q9Y2Y8 225 aaPredicted RBP20.48■□□□□ 0.87
CCDC171-206ENST00000474193 SPDYE4A6NLX3 237 aa20.47■□□□□ 0.87
CCDC171-206ENST00000474193 GLP2RO95838 553 aa20.47■□□□□ 0.87
CCDC171-206ENST00000474193 GUCY2CP25092 1073 aa20.47■□□□□ 0.87
CCDC171-206ENST00000474193 NPTX2P47972 431 aa20.47■□□□□ 0.87
CCDC171-206ENST00000474193 AFF1P51825 1210 aaKnown RBP20.47■□□□□ 0.87
CCDC171-206ENST00000474193 STRN3Q13033 797 aa20.47■□□□□ 0.87
CCDC171-206ENST00000474193 ATF7IP2Q5U623 682 aa20.47■□□□□ 0.87
CCDC171-206ENST00000474193 ANKRD54Q6NXT1 300 aa20.47■□□□□ 0.87
CCDC171-206ENST00000474193 ELMSAN1Q6PJG2 1045 aa20.47■□□□□ 0.87
CCDC171-206ENST00000474193 C1orf186Q6ZWK4 172 aa20.47■□□□□ 0.87
CCDC171-206ENST00000474193 COLGALT2Q8IYK4 626 aa20.47■□□□□ 0.87
CCDC171-206ENST00000474193 CCDC113Q9H0I3 377 aa20.47■□□□□ 0.87
CCDC171-206ENST00000474193 PDZD7Q9H5P4 517 aa20.47■□□□□ 0.87
CCDC171-206ENST00000474193 KLK14Q9P0G3 267 aa20.47■□□□□ 0.87
CCDC171-206ENST00000474193 FBXO2Q9UK22 296 aaPredicted RBP20.47■□□□□ 0.87
CCDC171-206ENST00000474193 RCOR1Q9UKL0 485 aa20.47■□□□□ 0.87
CCDC171-206ENST00000474193 BDP1A6H8Y1 2624 aa20.47■□□□□ 0.87
CCDC171-206ENST00000474193 XIRP2A4UGR9 3374 aa20.46■□□□□ 0.87
CCDC171-206ENST00000474193 H0YCG3 227 aa20.46■□□□□ 0.87
CCDC171-206ENST00000474193 CUTAO60888 179 aa20.46■□□□□ 0.87
CCDC171-206ENST00000474193 URODP06132 367 aa20.46■□□□□ 0.87
CCDC171-206ENST00000474193 PLA2G4BP0C869 781 aa20.46■□□□□ 0.87
CCDC171-206ENST00000474193 ZP2Q05996 745 aa20.46■□□□□ 0.87
CCDC171-206ENST00000474193 TMEM173Q86WV6 379 aaPredicted RBP20.46■□□□□ 0.87
CCDC171-206ENST00000474193 TCHPQ9BT92 498 aa20.46■□□□□ 0.87
CCDC171-206ENST00000474193 MRPL4Q9BYD3 311 aaKnown RBP20.46■□□□□ 0.87
CCDC171-206ENST00000474193 MIOSQ9NXC5 875 aa20.46■□□□□ 0.87
CCDC171-206ENST00000474193 SNTG2Q9NY99 539 aa20.46■□□□□ 0.87
CCDC171-206ENST00000474193 LARSQ9P2J5 1176 aaKnown RBP20.46■□□□□ 0.87
CCDC171-206ENST00000474193 DPP7Q9UHL4 492 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms