RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 UBN1Q9NPG3 1134 aa20.82■□□□□ 0.92
PTCD3-210ENST00000473829 SPG21Q9NZD8 308 aa20.82■□□□□ 0.92
PTCD3-210ENST00000473829 LARSQ9P2J5 1176 aaKnown RBP20.82■□□□□ 0.92
PTCD3-210ENST00000473829 PCDHA7Q9UN72 937 aa20.82■□□□□ 0.92
PTCD3-210ENST00000473829 TNFSF13BQ9Y275 285 aa20.82■□□□□ 0.92
PTCD3-210ENST00000473829 GIT1Q9Y2X7 761 aa20.82■□□□□ 0.92
PTCD3-210ENST00000473829 MYMKA6NI61 221 aa20.81■□□□□ 0.92
PTCD3-210ENST00000473829 ABLIM1O14639 778 aa20.81■□□□□ 0.92
PTCD3-210ENST00000473829 GALTP07902 379 aa20.81■□□□□ 0.92
PTCD3-210ENST00000473829 PPM1AP35813 382 aa20.81■□□□□ 0.92
PTCD3-210ENST00000473829 ERVFC1P60507 584 aa20.81■□□□□ 0.92
PTCD3-210ENST00000473829 TFF2Q03403 129 aa20.81■□□□□ 0.92
PTCD3-210ENST00000473829 UBE3AQ05086 875 aa20.81■□□□□ 0.92
PTCD3-210ENST00000473829 E2F4Q16254 413 aa20.81■□□□□ 0.92
PTCD3-210ENST00000473829 CCDC73Q6ZRK6 1079 aa20.81■□□□□ 0.92
PTCD3-210ENST00000473829 HACE1Q8IYU2 909 aa20.81■□□□□ 0.92
PTCD3-210ENST00000473829 MYCT1Q8N699 235 aa20.81■□□□□ 0.92
PTCD3-210ENST00000473829 MRPS27Q92552 414 aaKnown RBP20.81■□□□□ 0.92
PTCD3-210ENST00000473829 ADPGKQ9BRR6 497 aa20.81■□□□□ 0.92
PTCD3-210ENST00000473829 MRPL4Q9BYD3 311 aaKnown RBP20.81■□□□□ 0.92
PTCD3-210ENST00000473829 CDT1Q9H211 546 aa20.81■□□□□ 0.92
PTCD3-210ENST00000473829 PARVGQ9HBI0 331 aa20.81■□□□□ 0.92
PTCD3-210ENST00000473829 SNTG2Q9NY99 539 aa20.81■□□□□ 0.92
PTCD3-210ENST00000473829 PARP2Q9UGN5 583 aa20.81■□□□□ 0.92
PTCD3-210ENST00000473829 RCOR1Q9UKL0 485 aa20.81■□□□□ 0.92
PTCD3-210ENST00000473829 CFAP45Q9UL16 551 aa20.81■□□□□ 0.92
PTCD3-210ENST00000473829 TBCAO75347 108 aaKnown RBP20.8■□□□□ 0.92
PTCD3-210ENST00000473829 RECQL4O94761 1208 aa20.8■□□□□ 0.92
PTCD3-210ENST00000473829 GTF2F1P35269 517 aaKnown RBP eCLIP20.8■□□□□ 0.92
PTCD3-210ENST00000473829 ME1P48163 572 aa20.8■□□□□ 0.92
PTCD3-210ENST00000473829 ALDH7A1P49419 539 aaKnown RBP20.8■□□□□ 0.92
PTCD3-210ENST00000473829 SMTNP53814 917 aa20.8■□□□□ 0.92
PTCD3-210ENST00000473829 DCAF4L1Q3SXM0 396 aa20.8■□□□□ 0.92
PTCD3-210ENST00000473829 HAUS6Q7Z4H7 955 aa20.8■□□□□ 0.92
PTCD3-210ENST00000473829 CEP120Q8N960 986 aa20.8■□□□□ 0.92
PTCD3-210ENST00000473829 DDX12PQ92771 950 aa20.8■□□□□ 0.92
PTCD3-210ENST00000473829 DNAJC19Q96DA6 116 aa20.8■□□□□ 0.92
PTCD3-210ENST00000473829 ZHX3Q9H4I2 956 aa20.8■□□□□ 0.92
PTCD3-210ENST00000473829 TLR9Q9NR96 1032 aa20.8■□□□□ 0.92
PTCD3-210ENST00000473829 KANSL3Q9P2N6 904 aa20.8■□□□□ 0.92
PTCD3-210ENST00000473829 LZTS1Q9Y250 596 aa20.8■□□□□ 0.92
PTCD3-210ENST00000473829 ZMYM2Q9UBW7 1377 aa20.8■□□□□ 0.92
PTCD3-210ENST00000473829 TRIP11Q15643 1979 aa20.79■□□□□ 0.92
PTCD3-210ENST00000473829 K7ENM7 598 aa20.79■□□□□ 0.92
PTCD3-210ENST00000473829 FSCN2O14926 492 aa20.79■□□□□ 0.92
PTCD3-210ENST00000473829 PROZP22891 400 aa20.79■□□□□ 0.92
PTCD3-210ENST00000473829 DSC1Q08554 894 aa20.79■□□□□ 0.92
PTCD3-210ENST00000473829 HYAL1Q12794 435 aa20.79■□□□□ 0.92
PTCD3-210ENST00000473829 STRN3Q13033 797 aa20.79■□□□□ 0.92
PTCD3-210ENST00000473829 ZNF568Q3ZCX4 644 aa20.79■□□□□ 0.92
PTCD3-210ENST00000473829 SV2BQ7L1I2 683 aa20.79■□□□□ 0.92
PTCD3-210ENST00000473829 COLGALT2Q8IYK4 626 aa20.79■□□□□ 0.92
PTCD3-210ENST00000473829 KCNN1Q92952 543 aa20.79■□□□□ 0.92
PTCD3-210ENST00000473829 ZBTB45Q96K62 511 aaPredicted RBP20.79■□□□□ 0.92
PTCD3-210ENST00000473829 VN1R3Q9BXE9 311 aa20.79■□□□□ 0.92
PTCD3-210ENST00000473829 GDAQ9Y2T3 454 aa20.79■□□□□ 0.92
PTCD3-210ENST00000473829 PTGESO14684 152 aa20.78■□□□□ 0.92
PTCD3-210ENST00000473829 TRAK2O60296 914 aa20.78■□□□□ 0.92
PTCD3-210ENST00000473829 NMT1P30419 496 aaKnown RBP20.78■□□□□ 0.92
PTCD3-210ENST00000473829 COL19A1Q14993 1142 aa20.78■□□□□ 0.92
PTCD3-210ENST00000473829 ZBTB33Q86T24 672 aa20.78■□□□□ 0.92
PTCD3-210ENST00000473829 SFR1Q86XK3 245 aa20.78■□□□□ 0.92
PTCD3-210ENST00000473829 LEO1Q8WVC0 666 aaPredicted RBP20.78■□□□□ 0.92
PTCD3-210ENST00000473829 STAMQ92783 540 aa20.78■□□□□ 0.92
PTCD3-210ENST00000473829 HLA-CQ95604 372 aa20.78■□□□□ 0.92
PTCD3-210ENST00000473829 DHX58Q96C10 678 aa20.78■□□□□ 0.92
PTCD3-210ENST00000473829 IGSF21Q96ID5 467 aa20.78■□□□□ 0.92
PTCD3-210ENST00000473829 UBE2ZQ9H832 354 aaPredicted RBP20.78■□□□□ 0.92
PTCD3-210ENST00000473829 KCNG1Q9UIX4 513 aa20.78■□□□□ 0.92
PTCD3-210ENST00000473829 F8W810 466 aa20.77■□□□□ 0.92
PTCD3-210ENST00000473829 NRP1O14786 923 aa20.77■□□□□ 0.92
PTCD3-210ENST00000473829 KRT17Q04695 432 aa20.77■□□□□ 0.92
PTCD3-210ENST00000473829 PLPP4Q5VZY2 271 aa20.77■□□□□ 0.92
PTCD3-210ENST00000473829 RESP18Q5W5W9 173 aa20.77■□□□□ 0.92
PTCD3-210ENST00000473829 MPZL3Q6UWV2 235 aa20.77■□□□□ 0.92
PTCD3-210ENST00000473829 TMEM169Q96HH4 297 aa20.77■□□□□ 0.92
PTCD3-210ENST00000473829 FAM193BQ96PV7 902 aaPredicted RBP20.77■□□□□ 0.92
PTCD3-210ENST00000473829 TCF25Q9BQ70 676 aa20.77■□□□□ 0.92
PTCD3-210ENST00000473829 TMEM175Q9BSA9 504 aa20.77■□□□□ 0.92
PTCD3-210ENST00000473829 HAPLN2Q9GZV7 340 aa20.77■□□□□ 0.92
PTCD3-210ENST00000473829 MARCH5Q9NX47 278 aa20.77■□□□□ 0.92
PTCD3-210ENST00000473829 ANKFY1Q9P2R3 1169 aa20.77■□□□□ 0.92
PTCD3-210ENST00000473829 CACNG4Q9UBN1 327 aa20.77■□□□□ 0.92
PTCD3-210ENST00000473829 COG5Q9UP83 839 aa20.77■□□□□ 0.92
PTCD3-210ENST00000473829 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.76■□□□□ 0.91
PTCD3-210ENST00000473829 LINC01565O15544 149 aa20.76■□□□□ 0.91
PTCD3-210ENST00000473829 HARSP12081 509 aaKnown RBP20.76■□□□□ 0.91
PTCD3-210ENST00000473829 GRM5P41594 1212 aa20.76■□□□□ 0.91
PTCD3-210ENST00000473829 KRT85P78386 507 aa20.76■□□□□ 0.91
PTCD3-210ENST00000473829 GRIK3Q13003 919 aa20.76■□□□□ 0.91
PTCD3-210ENST00000473829 ZC2HC1CQ53FD0 456 aaPredicted RBP20.76■□□□□ 0.91
PTCD3-210ENST00000473829 ZPBP2Q6X784 338 aa20.76■□□□□ 0.91
PTCD3-210ENST00000473829 FAM178BQ8IXR5 827 aa20.76■□□□□ 0.91
PTCD3-210ENST00000473829 MICAL1Q8TDZ2 1067 aa20.76■□□□□ 0.91
PTCD3-210ENST00000473829 ATXN2LQ8WWM7 1075 aaKnown RBP20.76■□□□□ 0.91
PTCD3-210ENST00000473829 RPS6KC1Q96S38 1066 aa20.76■□□□□ 0.91
PTCD3-210ENST00000473829 PUF60Q9UHX1 559 aaKnown RBP20.76■□□□□ 0.91
PTCD3-210ENST00000473829 TBX20Q9UMR3 447 aa20.76■□□□□ 0.91
PTCD3-210ENST00000473829 PRG3Q9Y2Y8 225 aaPredicted RBP20.76■□□□□ 0.91
PTCD3-210ENST00000473829 CITO14578 2027 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms