RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 BICD1Q96G01 975 aa12.69□□□□□ -0.38
CPNE1-222ENST00000473373 CDCA3Q99618 268 aaPredicted RBP12.69□□□□□ -0.38
CPNE1-222ENST00000473373 RUSC1Q9BVN2 902 aa12.69□□□□□ -0.38
CPNE1-222ENST00000473373 TIPINQ9BVW5 301 aa12.69□□□□□ -0.38
CPNE1-222ENST00000473373 ZSCAN16Q9H4T2 348 aaPredicted RBP12.69□□□□□ -0.38
CPNE1-222ENST00000473373 KCNG1Q9UIX4 513 aa12.69□□□□□ -0.38
CPNE1-222ENST00000473373 GDAQ9Y2T3 454 aa12.69□□□□□ -0.38
CPNE1-222ENST00000473373 GIT1Q9Y2X7 761 aa12.69□□□□□ -0.38
CPNE1-222ENST00000473373 A0A1B0GUA9 196 aa12.68□□□□□ -0.38
CPNE1-222ENST00000473373 SFI1A8K8P3 1242 aa12.68□□□□□ -0.38
CPNE1-222ENST00000473373 ACKR2O00590 384 aa12.68□□□□□ -0.38
CPNE1-222ENST00000473373 FAM13AO94988 1023 aa12.68□□□□□ -0.38
CPNE1-222ENST00000473373 GALTP07902 379 aa12.68□□□□□ -0.38
CPNE1-222ENST00000473373 ALADP13716 330 aa12.68□□□□□ -0.38
CPNE1-222ENST00000473373 SLC11A1P49279 550 aa12.68□□□□□ -0.38
CPNE1-222ENST00000473373 YARSP54577 528 aaKnown RBP12.68□□□□□ -0.38
CPNE1-222ENST00000473373 STK38Q15208 465 aa12.68□□□□□ -0.38
CPNE1-222ENST00000473373 AMHR2Q16671 573 aa12.68□□□□□ -0.38
CPNE1-222ENST00000473373 FAM187BQ17R55 369 aa12.68□□□□□ -0.38
CPNE1-222ENST00000473373 DCAF4L1Q3SXM0 396 aa12.68□□□□□ -0.38
CPNE1-222ENST00000473373 ZNF568Q3ZCX4 644 aa12.68□□□□□ -0.38
CPNE1-222ENST00000473373 ATF7IP2Q5U623 682 aa12.68□□□□□ -0.38
CPNE1-222ENST00000473373 KIAA1841Q6NSI8 718 aa12.68□□□□□ -0.38
CPNE1-222ENST00000473373 KCNK18Q7Z418 384 aa12.68□□□□□ -0.38
CPNE1-222ENST00000473373 GPBP1Q86WP2 473 aa12.68□□□□□ -0.38
CPNE1-222ENST00000473373 ZNF280BQ86YH2 543 aa12.68□□□□□ -0.38
CPNE1-222ENST00000473373 KCTD17Q8N5Z5 321 aa12.68□□□□□ -0.38
CPNE1-222ENST00000473373 IGSF21Q96ID5 467 aa12.68□□□□□ -0.38
CPNE1-222ENST00000473373 ZFP42Q96MM3 310 aa12.68□□□□□ -0.38
CPNE1-222ENST00000473373 TMEM175Q9BSA9 504 aa12.68□□□□□ -0.38
CPNE1-222ENST00000473373 MMTAG2Q9BU76 263 aaKnown RBP12.68□□□□□ -0.38
CPNE1-222ENST00000473373 MRPL4Q9BYD3 311 aaKnown RBP12.68□□□□□ -0.38
CPNE1-222ENST00000473373 FZD8Q9H461 694 aa12.68□□□□□ -0.38
CPNE1-222ENST00000473373 SNTG2Q9NY99 539 aa12.68□□□□□ -0.38
CPNE1-222ENST00000473373 STK39Q9UEW8 545 aa12.68□□□□□ -0.38
CPNE1-222ENST00000473373 BARX2Q9UMQ3 279 aaPredicted RBP12.68□□□□□ -0.38
CPNE1-222ENST00000473373 USP20Q9Y2K6 914 aa12.68□□□□□ -0.38
CPNE1-222ENST00000473373 RBM19Q9Y4C8 960 aaKnown RBP12.68□□□□□ -0.38
CPNE1-222ENST00000473373 CLIC4Q9Y696 253 aa12.68□□□□□ -0.38
CPNE1-222ENST00000473373 PDCD11Q14690 1871 aaKnown RBP12.68□□□□□ -0.38
CPNE1-222ENST00000473373 MTCL1Q9Y4B5 1905 aaKnown RBP12.67□□□□□ -0.38
CPNE1-222ENST00000473373 TULP1O00294 542 aaPredicted RBP12.67□□□□□ -0.38
CPNE1-222ENST00000473373 C2CD2LO14523 706 aa12.67□□□□□ -0.38
CPNE1-222ENST00000473373 NRP1O14786 923 aa12.67□□□□□ -0.38
CPNE1-222ENST00000473373 SLC16A4O15374 487 aa12.67□□□□□ -0.38
CPNE1-222ENST00000473373 SLC26A4O43511 780 aa12.67□□□□□ -0.38
CPNE1-222ENST00000473373 TBX10O75333 385 aa12.67□□□□□ -0.38
CPNE1-222ENST00000473373 TBCAO75347 108 aaKnown RBP12.67□□□□□ -0.38
CPNE1-222ENST00000473373 DDHD2O94830 711 aa12.67□□□□□ -0.38
CPNE1-222ENST00000473373 URODP06132 367 aa12.67□□□□□ -0.38
CPNE1-222ENST00000473373 PLCG1P19174 1290 aa12.67□□□□□ -0.38
CPNE1-222ENST00000473373 NPTX2P47972 431 aa12.67□□□□□ -0.38
CPNE1-222ENST00000473373 DLX2Q07687 328 aaPredicted RBP12.67□□□□□ -0.38
CPNE1-222ENST00000473373 GRIK3Q13003 919 aa12.67□□□□□ -0.38
CPNE1-222ENST00000473373 RESTQ13127 1097 aa12.67□□□□□ -0.38
CPNE1-222ENST00000473373 ADAM15Q13444 863 aa12.67□□□□□ -0.38
CPNE1-222ENST00000473373 SMAD4Q13485 552 aaKnown RBP12.67□□□□□ -0.38
CPNE1-222ENST00000473373 GIT2Q14161 759 aa12.67□□□□□ -0.38
CPNE1-222ENST00000473373 KARSQ15046 597 aaKnown RBP12.67□□□□□ -0.38
CPNE1-222ENST00000473373 DUSP6Q16828 381 aa12.67□□□□□ -0.38
CPNE1-222ENST00000473373 FOXD4L6Q3SYB3 417 aaPredicted RBP12.67□□□□□ -0.38
CPNE1-222ENST00000473373 SPECC1Q5M775 1068 aa12.67□□□□□ -0.38
CPNE1-222ENST00000473373 FAM173BQ6P4H8 233 aa12.67□□□□□ -0.38
CPNE1-222ENST00000473373 FOXD4L3Q6VB84 417 aaPredicted RBP12.67□□□□□ -0.38
CPNE1-222ENST00000473373 ZBTB33Q86T24 672 aa12.67□□□□□ -0.38
CPNE1-222ENST00000473373 DDX53Q86TM3 631 aaKnown RBP12.67□□□□□ -0.38
CPNE1-222ENST00000473373 SYT2Q8N9I0 419 aaPredicted RBP12.67□□□□□ -0.38
CPNE1-222ENST00000473373 AUTS2Q8WXX7 1259 aa12.67□□□□□ -0.38
CPNE1-222ENST00000473373 SNX21Q969T3 373 aa12.67□□□□□ -0.38
CPNE1-222ENST00000473373 ZNF396Q96N95 335 aaPredicted RBP12.67□□□□□ -0.38
CPNE1-222ENST00000473373 PNMA5Q96PV4 448 aa12.67□□□□□ -0.38
CPNE1-222ENST00000473373 CCDC94Q9BW85 323 aaPredicted RBP12.67□□□□□ -0.38
CPNE1-222ENST00000473373 COLEC11Q9BWP8 271 aa12.67□□□□□ -0.38
CPNE1-222ENST00000473373 APOL5Q9BWW9 433 aa12.67□□□□□ -0.38
CPNE1-222ENST00000473373 EMILIN2Q9BXX0 1053 aa12.67□□□□□ -0.38
CPNE1-222ENST00000473373 PDZD7Q9H5P4 517 aa12.67□□□□□ -0.38
CPNE1-222ENST00000473373 C17orf75Q9HAS0 396 aa12.67□□□□□ -0.38
CPNE1-222ENST00000473373 KCND2Q9NZV8 630 aa12.67□□□□□ -0.38
CPNE1-222ENST00000473373 LARSQ9P2J5 1176 aaKnown RBP12.67□□□□□ -0.38
CPNE1-222ENST00000473373 PLXNA3P51805 1871 aa12.66□□□□□ -0.38
CPNE1-222ENST00000473373 HIDE1A8MVS5 230 aa12.66□□□□□ -0.38
CPNE1-222ENST00000473373 H0YCG3 227 aa12.66□□□□□ -0.38
CPNE1-222ENST00000473373 FSCN2O14926 492 aa12.66□□□□□ -0.38
CPNE1-222ENST00000473373 RECQL4O94761 1208 aa12.66□□□□□ -0.38
CPNE1-222ENST00000473373 THP07101 528 aa12.66□□□□□ -0.38
CPNE1-222ENST00000473373 GUCY2CP25092 1073 aa12.66□□□□□ -0.38
CPNE1-222ENST00000473373 AFF1P51825 1210 aaKnown RBP12.66□□□□□ -0.38
CPNE1-222ENST00000473373 OSTNP61366 133 aa12.66□□□□□ -0.38
CPNE1-222ENST00000473373 HYIQ5T013 277 aa12.66□□□□□ -0.38
CPNE1-222ENST00000473373 C1orf186Q6ZWK4 172 aa12.66□□□□□ -0.38
CPNE1-222ENST00000473373 TMEM173Q86WV6 379 aaPredicted RBP12.66□□□□□ -0.38
CPNE1-222ENST00000473373 MYCT1Q8N699 235 aa12.66□□□□□ -0.38
CPNE1-222ENST00000473373 LARP4BQ92615 738 aaKnown RBP12.66□□□□□ -0.38
CPNE1-222ENST00000473373 CASP10Q92851 521 aa12.66□□□□□ -0.38
CPNE1-222ENST00000473373 POP1Q99575 1024 aaKnown RBP12.66□□□□□ -0.38
CPNE1-222ENST00000473373 MRPL17Q9NRX2 175 aaKnown RBP12.66□□□□□ -0.38
CPNE1-222ENST00000473373 ANKFY1Q9P2R3 1169 aa12.66□□□□□ -0.38
CPNE1-222ENST00000473373 TCHHQ07283 1943 aa12.65□□□□□ -0.38
CPNE1-222ENST00000473373 NPHP3-ACAD11A0A0J9YXS1 232 aa12.65□□□□□ -0.38
CPNE1-222ENST00000473373 CASTOR2A6NHX0 329 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms