RNA–Protein interactions for RNA: ENST00000473252.5

C9orf85-204, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 5

Gene C9orf85, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-204ENST00000473252 COLGALT2Q8IYK4 626 aa13.95□□□□□ -0.18
C9orf85-204ENST00000473252 MRPL43Q8N983 215 aaKnown RBP13.95□□□□□ -0.18
C9orf85-204ENST00000473252 GAD1Q99259 594 aa13.95□□□□□ -0.18
C9orf85-204ENST00000473252 NXF3Q9H4D5 531 aaKnown RBP13.95□□□□□ -0.18
C9orf85-204ENST00000473252 PDZD7Q9H5P4 517 aa13.95□□□□□ -0.18
C9orf85-204ENST00000473252 IGFLR1Q9H665 355 aa13.95□□□□□ -0.18
C9orf85-204ENST00000473252 RTN4Q9NQC3 1192 aaKnown RBP13.95□□□□□ -0.18
C9orf85-204ENST00000473252 CCDC39Q9UFE4 941 aa13.95□□□□□ -0.18
C9orf85-204ENST00000473252 PRKAG3Q9UGI9 489 aa13.95□□□□□ -0.18
C9orf85-204ENST00000473252 TNFSF13BQ9Y275 285 aa13.95□□□□□ -0.18
C9orf85-204ENST00000473252 SSX2IPQ9Y2D8 614 aa13.95□□□□□ -0.18
C9orf85-204ENST00000473252 CLIC4Q9Y696 253 aa13.95□□□□□ -0.18
C9orf85-204ENST00000473252 NT5C1B-RDH14C9J2C7 533 aa13.94□□□□□ -0.18
C9orf85-204ENST00000473252 NRP1O14786 923 aa13.94□□□□□ -0.18
C9orf85-204ENST00000473252 POMCP01189 267 aa13.94□□□□□ -0.18
C9orf85-204ENST00000473252 DDIT3P35638 169 aa13.94□□□□□ -0.18
C9orf85-204ENST00000473252 TXLNAP40222 546 aa13.94□□□□□ -0.18
C9orf85-204ENST00000473252 PBX3P40426 434 aa13.94□□□□□ -0.18
C9orf85-204ENST00000473252 MLH1P40692 756 aa13.94□□□□□ -0.18
C9orf85-204ENST00000473252 SLC11A1P49279 550 aa13.94□□□□□ -0.18
C9orf85-204ENST00000473252 NDUFV1P49821 464 aa13.94□□□□□ -0.18
C9orf85-204ENST00000473252 KCNC3Q14003 757 aa13.94□□□□□ -0.18
C9orf85-204ENST00000473252 SLC39A14Q15043 492 aa13.94□□□□□ -0.18
C9orf85-204ENST00000473252 ATF7IP2Q5U623 682 aa13.94□□□□□ -0.18
C9orf85-204ENST00000473252 EP400NLQ6ZTU2 488 aa13.94□□□□□ -0.18
C9orf85-204ENST00000473252 GPR65Q8IYL9 337 aa13.94□□□□□ -0.18
C9orf85-204ENST00000473252 VPS52Q8N1B4 723 aa13.94□□□□□ -0.18
C9orf85-204ENST00000473252 GSTCDQ8NEC7 633 aa13.94□□□□□ -0.18
C9orf85-204ENST00000473252 RASSF8Q8NHQ8 419 aa13.94□□□□□ -0.18
C9orf85-204ENST00000473252 MSLNLQ96KJ4 702 aa13.94□□□□□ -0.18
C9orf85-204ENST00000473252 RPS6KC1Q96S38 1066 aa13.94□□□□□ -0.18
C9orf85-204ENST00000473252 MRPL4Q9BYD3 311 aaKnown RBP13.94□□□□□ -0.18
C9orf85-204ENST00000473252 ZBP1Q9H171 429 aa13.94□□□□□ -0.18
C9orf85-204ENST00000473252 DNAJB4Q9UDY4 337 aa13.94□□□□□ -0.18
C9orf85-204ENST00000473252 PARP2Q9UGN5 583 aa13.94□□□□□ -0.18
C9orf85-204ENST00000473252 CD207Q9UJ71 328 aa13.94□□□□□ -0.18
C9orf85-204ENST00000473252 HES2Q9Y543 173 aa13.94□□□□□ -0.18
C9orf85-204ENST00000473252 SPTBN5Q9NRC6 3674 aaKnown RBP13.94□□□□□ -0.18
C9orf85-204ENST00000473252 CITO14578 2027 aa13.93□□□□□ -0.18
C9orf85-204ENST00000473252 TRIP11Q15643 1979 aa13.93□□□□□ -0.18
C9orf85-204ENST00000473252 C2orf71A6NGG8 1288 aa13.93□□□□□ -0.18
C9orf85-204ENST00000473252 H3BQ06 376 aaPredicted RBP13.93□□□□□ -0.18
C9orf85-204ENST00000473252 MAP3K13O43283 966 aa13.93□□□□□ -0.18
C9orf85-204ENST00000473252 TBX10O75333 385 aa13.93□□□□□ -0.18
C9orf85-204ENST00000473252 SSBP05455 408 aaKnown RBP eCLIP13.93□□□□□ -0.18
C9orf85-204ENST00000473252 GTF2F1P35269 517 aaKnown RBP eCLIP13.93□□□□□ -0.18
C9orf85-204ENST00000473252 NASPP49321 788 aaPredicted RBP13.93□□□□□ -0.18
C9orf85-204ENST00000473252 AFF1P51825 1210 aaKnown RBP13.93□□□□□ -0.18
C9orf85-204ENST00000473252 STRN3Q13033 797 aa13.93□□□□□ -0.18
C9orf85-204ENST00000473252 SMAD4Q13485 552 aaKnown RBP13.93□□□□□ -0.18
C9orf85-204ENST00000473252 NT5DC1Q5TFE4 455 aa13.93□□□□□ -0.18
C9orf85-204ENST00000473252 PLPP4Q5VZY2 271 aa13.93□□□□□ -0.18
C9orf85-204ENST00000473252 RBM23Q86U06 439 aaKnown RBP13.93□□□□□ -0.18
C9orf85-204ENST00000473252 CDR2LQ86X02 465 aaPredicted RBP13.93□□□□□ -0.18
C9orf85-204ENST00000473252 LARP4BQ92615 738 aaKnown RBP13.93□□□□□ -0.18
C9orf85-204ENST00000473252 RAD54LQ92698 747 aa13.93□□□□□ -0.18
C9orf85-204ENST00000473252 ZNF396Q96N95 335 aaPredicted RBP13.93□□□□□ -0.18
C9orf85-204ENST00000473252 PLIN2Q99541 437 aa13.93□□□□□ -0.18
C9orf85-204ENST00000473252 ACO2Q99798 780 aaKnown RBP13.93□□□□□ -0.18
C9orf85-204ENST00000473252 COLEC11Q9BWP8 271 aa13.93□□□□□ -0.18
C9orf85-204ENST00000473252 GBP3Q9H0R5 595 aa13.93□□□□□ -0.18
C9orf85-204ENST00000473252 BLOC1S4Q9NUP1 217 aa13.93□□□□□ -0.18
C9orf85-204ENST00000473252 MIOSQ9NXC5 875 aa13.93□□□□□ -0.18
C9orf85-204ENST00000473252 STK17AQ9UEE5 414 aa13.93□□□□□ -0.18
C9orf85-204ENST00000473252 FBXO2Q9UK22 296 aaPredicted RBP13.93□□□□□ -0.18
C9orf85-204ENST00000473252 XIRP2A4UGR9 3374 aa13.93□□□□□ -0.18
C9orf85-204ENST00000473252 TTLL13PA6NNM8 815 aa13.92□□□□□ -0.18
C9orf85-204ENST00000473252 MBTPS2O43462 519 aa13.92□□□□□ -0.18
C9orf85-204ENST00000473252 PPP6R2O75170 966 aa13.92□□□□□ -0.18
C9orf85-204ENST00000473252 CSPG5O95196 566 aa13.92□□□□□ -0.18
C9orf85-204ENST00000473252 BRD1O95696 1058 aa13.92□□□□□ -0.18
C9orf85-204ENST00000473252 CXCL14O95715 111 aa13.92□□□□□ -0.18
C9orf85-204ENST00000473252 C1RP00736 705 aa13.92□□□□□ -0.18
C9orf85-204ENST00000473252 HOXB8P17481 243 aaPredicted RBP13.92□□□□□ -0.18
C9orf85-204ENST00000473252 PLCG1P19174 1290 aa13.92□□□□□ -0.18
C9orf85-204ENST00000473252 AKAP5P24588 427 aa13.92□□□□□ -0.18
C9orf85-204ENST00000473252 SCNN1GP51170 649 aa13.92□□□□□ -0.18
C9orf85-204ENST00000473252 ZNF131P52739 623 aa13.92□□□□□ -0.18
C9orf85-204ENST00000473252 GRIN1Q05586 938 aa13.92□□□□□ -0.18
C9orf85-204ENST00000473252 DLX2Q07687 328 aaPredicted RBP13.92□□□□□ -0.18
C9orf85-204ENST00000473252 KARSQ15046 597 aaKnown RBP13.92□□□□□ -0.18
C9orf85-204ENST00000473252 SMAD2Q15796 467 aaKnown RBP13.92□□□□□ -0.18
C9orf85-204ENST00000473252 ARSHQ5FYA8 562 aa13.92□□□□□ -0.18
C9orf85-204ENST00000473252 ATL3Q6DD88 541 aa13.92□□□□□ -0.18
C9orf85-204ENST00000473252 ZPBP2Q6X784 338 aa13.92□□□□□ -0.18
C9orf85-204ENST00000473252 PPFIBP1Q86W92 1011 aa13.92□□□□□ -0.18
C9orf85-204ENST00000473252 TMEM173Q86WV6 379 aaPredicted RBP13.92□□□□□ -0.18
C9orf85-204ENST00000473252 FAM178BQ8IXR5 827 aa13.92□□□□□ -0.18
C9orf85-204ENST00000473252 KRI1Q8N9T8 703 aaKnown RBP13.92□□□□□ -0.18
C9orf85-204ENST00000473252 CASP10Q92851 521 aa13.92□□□□□ -0.18
C9orf85-204ENST00000473252 ZFP42Q96MM3 310 aa13.92□□□□□ -0.18
C9orf85-204ENST00000473252 USP28Q96RU2 1077 aa13.92□□□□□ -0.18
C9orf85-204ENST00000473252 KIFC3Q9BVG8 833 aa13.92□□□□□ -0.18
C9orf85-204ENST00000473252 APOL6Q9BWW8 343 aa13.92□□□□□ -0.18
C9orf85-204ENST00000473252 POLD4Q9HCU8 107 aa13.92□□□□□ -0.18
C9orf85-204ENST00000473252 PTPRHQ9HD43 1115 aa13.92□□□□□ -0.18
C9orf85-204ENST00000473252 SNTG2Q9NY99 539 aa13.92□□□□□ -0.18
C9orf85-204ENST00000473252 CLEC1BQ9P126 229 aa13.92□□□□□ -0.18
C9orf85-204ENST00000473252 SFI1A8K8P3 1242 aa13.91□□□□□ -0.18
C9orf85-204ENST00000473252 HIDE1A8MVS5 230 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms