RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 CATSPER4Q7RTX7 472 aa10.03□□□□□ -0.8
SMC4-214ENST00000472991 SRGAP1Q7Z6B7 1085 aa10.03□□□□□ -0.8
SMC4-214ENST00000472991 BPHLQ86WA6 291 aaPredicted RBP10.03□□□□□ -0.8
SMC4-214ENST00000472991 ZBTB8OSQ8IWT0 167 aa10.03□□□□□ -0.8
SMC4-214ENST00000472991 CEP57L1Q8IYX8 460 aa10.03□□□□□ -0.8
SMC4-214ENST00000472991 TDHQ8IZJ6 230 aa10.03□□□□□ -0.8
SMC4-214ENST00000472991 DEPTORQ8TB45 409 aa10.03□□□□□ -0.8
SMC4-214ENST00000472991 LINC01599Q8WXQ3 324 aa10.03□□□□□ -0.8
SMC4-214ENST00000472991 HERVK_113Q902F9 699 aa10.03□□□□□ -0.8
SMC4-214ENST00000472991 PYM1Q9BRP8 204 aaKnown RBP10.03□□□□□ -0.8
SMC4-214ENST00000472991 INO80BQ9C086 356 aaPredicted RBP10.03□□□□□ -0.8
SMC4-214ENST00000472991 TMX1Q9H3N1 280 aa10.03□□□□□ -0.8
SMC4-214ENST00000472991 ZHX3Q9H4I2 956 aa10.03□□□□□ -0.8
SMC4-214ENST00000472991 MAGEF1Q9HAY2 307 aa10.03□□□□□ -0.8
SMC4-214ENST00000472991 KBTBD4Q9NVX7 518 aa10.03□□□□□ -0.8
SMC4-214ENST00000472991 CXXC1Q9P0U4 656 aaPredicted RBP10.03□□□□□ -0.8
SMC4-214ENST00000472991 ST3GAL5Q9UNP4 418 aa10.03□□□□□ -0.8
SMC4-214ENST00000472991 ABHD14A-ACY1A0A1B0GW23 586 aa10.02□□□□□ -0.81
SMC4-214ENST00000472991 CCDC169A6NNP5 214 aa10.02□□□□□ -0.81
SMC4-214ENST00000472991 MGEA5O60502 916 aa10.02□□□□□ -0.81
SMC4-214ENST00000472991 PLS3P13797 630 aa10.02□□□□□ -0.81
SMC4-214ENST00000472991 CASP1P29466 404 aa10.02□□□□□ -0.81
SMC4-214ENST00000472991 AFMP43652 599 aa10.02□□□□□ -0.81
SMC4-214ENST00000472991 NPTX2P47972 431 aa10.02□□□□□ -0.81
SMC4-214ENST00000472991 KCNJ6P48051 423 aa10.02□□□□□ -0.81
SMC4-214ENST00000472991 ZNF131P52739 623 aa10.02□□□□□ -0.81
SMC4-214ENST00000472991 WDR5P61964 334 aaKnown RBP10.02□□□□□ -0.81
SMC4-214ENST00000472991 DEFB103AP81534 67 aa10.02□□□□□ -0.81
SMC4-214ENST00000472991 MBTD1Q05BQ5 628 aa10.02□□□□□ -0.81
SMC4-214ENST00000472991 POU5F1BQ06416 359 aa10.02□□□□□ -0.81
SMC4-214ENST00000472991 LONRF3Q496Y0 759 aa10.02□□□□□ -0.81
SMC4-214ENST00000472991 GRAMD1CQ8IYS0 662 aa10.02□□□□□ -0.81
SMC4-214ENST00000472991 DNAJC19Q96DA6 116 aa10.02□□□□□ -0.81
SMC4-214ENST00000472991 NFKBIZQ9BYH8 718 aa10.02□□□□□ -0.81
SMC4-214ENST00000472991 TRIM9Q9C026 710 aa10.02□□□□□ -0.81
SMC4-214ENST00000472991 C2orf40Q9H1Z8 148 aa10.02□□□□□ -0.81
SMC4-214ENST00000472991 MTIF3Q9H2K0 278 aaKnown RBP10.02□□□□□ -0.81
SMC4-214ENST00000472991 PARVGQ9HBI0 331 aa10.02□□□□□ -0.81
SMC4-214ENST00000472991 LARSQ9P2J5 1176 aaKnown RBP10.02□□□□□ -0.81
SMC4-214ENST00000472991 PIN4Q9Y237 131 aaKnown RBP10.02□□□□□ -0.81
SMC4-214ENST00000472991 COL4A6Q14031 1691 aa10.02□□□□□ -0.81
SMC4-214ENST00000472991 PHLPP2Q6ZVD8 1323 aa10.02□□□□□ -0.81
SMC4-214ENST00000472991 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.01□□□□□ -0.81
SMC4-214ENST00000472991 DENND3A2RUS2 1198 aa10.01□□□□□ -0.81
SMC4-214ENST00000472991 K7ENM7 598 aa10.01□□□□□ -0.81
SMC4-214ENST00000472991 SLC16A4O15374 487 aa10.01□□□□□ -0.81
SMC4-214ENST00000472991 EFCAB14O75071 495 aa10.01□□□□□ -0.81
SMC4-214ENST00000472991 ERLIN2O94905 339 aa10.01□□□□□ -0.81
SMC4-214ENST00000472991 ZNF202O95125 648 aa10.01□□□□□ -0.81
SMC4-214ENST00000472991 EDN1P05305 212 aa10.01□□□□□ -0.81
SMC4-214ENST00000472991 PRKCBP05771 671 aa10.01□□□□□ -0.81
SMC4-214ENST00000472991 SLFN14P0C7P3 912 aa10.01□□□□□ -0.81
SMC4-214ENST00000472991 IDEP14735 1019 aa10.01□□□□□ -0.81
SMC4-214ENST00000472991 LIG1P18858 919 aa10.01□□□□□ -0.81
SMC4-214ENST00000472991 IBSPP21815 317 aaPredicted RBP10.01□□□□□ -0.81
SMC4-214ENST00000472991 WDR4P57081 412 aaKnown RBP10.01□□□□□ -0.81
SMC4-214ENST00000472991 ASIC1P78348 528 aa10.01□□□□□ -0.81
SMC4-214ENST00000472991 AMPD3Q01432 767 aa10.01□□□□□ -0.81
SMC4-214ENST00000472991 DSC3Q14574 896 aa10.01□□□□□ -0.81
SMC4-214ENST00000472991 AGERQ15109 404 aa10.01□□□□□ -0.81
SMC4-214ENST00000472991 RASIP1Q5U651 963 aa10.01□□□□□ -0.81
SMC4-214ENST00000472991 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.01□□□□□ -0.814e-23■■■■■ 72.8
SMC4-214ENST00000472991 KRBA2Q6ZNG9 492 aa10.01□□□□□ -0.81
SMC4-214ENST00000472991 CLEC17AQ6ZS10 378 aa10.01□□□□□ -0.81
SMC4-214ENST00000472991 SFR1Q86XK3 245 aa10.01□□□□□ -0.81
SMC4-214ENST00000472991 MYOCDQ8IZQ8 938 aa10.01□□□□□ -0.81
SMC4-214ENST00000472991 MYCT1Q8N699 235 aa10.01□□□□□ -0.81
SMC4-214ENST00000472991 CNNM3Q8NE01 707 aa10.01□□□□□ -0.81
SMC4-214ENST00000472991 ARMC2Q8NEN0 867 aa10.01□□□□□ -0.81
SMC4-214ENST00000472991 GBP4Q96PP9 640 aa10.01□□□□□ -0.81
SMC4-214ENST00000472991 ADAM2Q99965 735 aa10.01□□□□□ -0.81
SMC4-214ENST00000472991 C1QTNF2Q9BXJ5 285 aa10.01□□□□□ -0.81
SMC4-214ENST00000472991 FTHL17Q9BXU8 183 aa10.01□□□□□ -0.81
SMC4-214ENST00000472991 LRRC27Q9C0I9 530 aa10.01□□□□□ -0.81
SMC4-214ENST00000472991 CCDC113Q9H0I3 377 aa10.01□□□□□ -0.81
SMC4-214ENST00000472991 BLZF1Q9H2G9 400 aa10.01□□□□□ -0.81
SMC4-214ENST00000472991 KDM4CQ9H3R0 1056 aa10.01□□□□□ -0.81
SMC4-214ENST00000472991 C17orf75Q9HAS0 396 aa10.01□□□□□ -0.81
SMC4-214ENST00000472991 KMT5AQ9NQR1 393 aa10.01□□□□□ -0.81
SMC4-214ENST00000472991 AGPAT5Q9NUQ2 364 aa10.01□□□□□ -0.81
SMC4-214ENST00000472991 PRMT7Q9NVM4 692 aaPredicted RBP10.01□□□□□ -0.81
SMC4-214ENST00000472991 USP25Q9UHP3 1055 aa10.01□□□□□ -0.81
SMC4-214ENST00000472991 SLC4A7Q9Y6M7 1214 aa10.01□□□□□ -0.81
SMC4-214ENST00000472991 COL4A4P53420 1690 aaPredicted RBP10□□□□□ -0.81
SMC4-214ENST00000472991 ATG2AQ2TAZ0 1938 aa10□□□□□ -0.81
SMC4-214ENST00000472991 A0A1W2PPC1 479 aa10□□□□□ -0.81
SMC4-214ENST00000472991 B4GALT5O43286 388 aa10□□□□□ -0.81
SMC4-214ENST00000472991 WIPF1O43516 503 aa10□□□□□ -0.81
SMC4-214ENST00000472991 TRAK2O60296 914 aa10□□□□□ -0.81
SMC4-214ENST00000472991 TSPAN1O60635 241 aa10□□□□□ -0.81
SMC4-214ENST00000472991 PRPF40AO75400 957 aaKnown RBP10□□□□□ -0.81
SMC4-214ENST00000472991 AMHP03971 560 aa10□□□□□ -0.81
SMC4-214ENST00000472991 ZSCAN20P17040 1043 aaPredicted RBP10□□□□□ -0.81
SMC4-214ENST00000472991 ARF4P18085 180 aaPredicted RBP10□□□□□ -0.81
SMC4-214ENST00000472991 GRM5P41594 1212 aa10□□□□□ -0.81
SMC4-214ENST00000472991 EFNA5P52803 228 aa10□□□□□ -0.81
SMC4-214ENST00000472991 SMTNP53814 917 aa10□□□□□ -0.81
SMC4-214ENST00000472991 NCKAP1LP55160 1127 aa10□□□□□ -0.81
SMC4-214ENST00000472991 FAM160A1Q05DH4 1040 aa10□□□□□ -0.81
SMC4-214ENST00000472991 COASYQ13057 564 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms