RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 CLCN4P51793 760 aa16.92■□□□□ 0.3
VTI1A-203ENST00000472892 NBR1Q14596 966 aa16.92■□□□□ 0.3
VTI1A-203ENST00000472892 ECM1Q16610 540 aa16.92■□□□□ 0.3
VTI1A-203ENST00000472892 RARS2Q5T160 578 aaKnown RBP16.92■□□□□ 0.3
VTI1A-203ENST00000472892 KIAA0319Q5VV43 1072 aa16.92■□□□□ 0.3
VTI1A-203ENST00000472892 HAUS3Q68CZ6 603 aa16.92■□□□□ 0.3
VTI1A-203ENST00000472892 KANK3Q6NY19 840 aa16.92■□□□□ 0.3
VTI1A-203ENST00000472892 ZBTB8OSQ8IWT0 167 aa16.92■□□□□ 0.3
VTI1A-203ENST00000472892 BSNDQ8WZ55 320 aa16.92■□□□□ 0.3
VTI1A-203ENST00000472892 HERC2P3Q9BVR0 1158 aa16.92■□□□□ 0.3
VTI1A-203ENST00000472892 COLEC11Q9BWP8 271 aa16.92■□□□□ 0.3
VTI1A-203ENST00000472892 C2orf40Q9H1Z8 148 aa16.92■□□□□ 0.3
VTI1A-203ENST00000472892 KCNH6Q9H252 994 aa16.92■□□□□ 0.3
VTI1A-203ENST00000472892 LRWD1Q9UFC0 647 aa16.92■□□□□ 0.3
VTI1A-203ENST00000472892 SSX2IPQ9Y2D8 614 aa16.92■□□□□ 0.3
VTI1A-203ENST00000472892 PRG3Q9Y2Y8 225 aaPredicted RBP16.92■□□□□ 0.3
VTI1A-203ENST00000472892 TECTAO75443 2155 aa16.91■□□□□ 0.3
VTI1A-203ENST00000472892 NR1I2O75469 434 aa16.91■□□□□ 0.3
VTI1A-203ENST00000472892 WEE2P0C1S8 567 aa16.91■□□□□ 0.3
VTI1A-203ENST00000472892 CCT6AP40227 531 aaKnown RBP16.91■□□□□ 0.3
VTI1A-203ENST00000472892 SIGLEC14Q08ET2 396 aa16.91■□□□□ 0.3
VTI1A-203ENST00000472892 RABEP1Q15276 862 aa16.91■□□□□ 0.3
VTI1A-203ENST00000472892 PTPN21Q16825 1174 aa16.91■□□□□ 0.3
VTI1A-203ENST00000472892 KIAA1841Q6NSI8 718 aa16.91■□□□□ 0.3
VTI1A-203ENST00000472892 CABP7Q86V35 215 aa16.91■□□□□ 0.3
VTI1A-203ENST00000472892 IGSF22Q8N9C0 903 aa16.91■□□□□ 0.3
VTI1A-203ENST00000472892 SPDYE1Q8NFV5 336 aaPredicted RBP16.91■□□□□ 0.3
VTI1A-203ENST00000472892 FBXL18Q96ME1 805 aa16.91■□□□□ 0.3
VTI1A-203ENST00000472892 RPS6KC1Q96S38 1066 aa16.91■□□□□ 0.3
VTI1A-203ENST00000472892 RXFP1Q9HBX9 757 aa16.91■□□□□ 0.3
VTI1A-203ENST00000472892 STK24Q9Y6E0 443 aa16.91■□□□□ 0.3
VTI1A-203ENST00000472892 TTLL13PA6NNM8 815 aa16.9■□□□□ 0.3
VTI1A-203ENST00000472892 ACKR2O00590 384 aa16.9■□□□□ 0.3
VTI1A-203ENST00000472892 URODP06132 367 aa16.9■□□□□ 0.3
VTI1A-203ENST00000472892 NAMPTP43490 491 aa16.9■□□□□ 0.3
VTI1A-203ENST00000472892 PTGDRQ13258 359 aa16.9■□□□□ 0.3
VTI1A-203ENST00000472892 MAPK6Q16659 721 aa16.9■□□□□ 0.3
VTI1A-203ENST00000472892 TMC5Q6UXY8 1006 aa16.9■□□□□ 0.3
VTI1A-203ENST00000472892 PBXIP1Q96AQ6 731 aa16.9■□□□□ 0.3
VTI1A-203ENST00000472892 CCDC113Q9H0I3 377 aa16.9■□□□□ 0.3
VTI1A-203ENST00000472892 BHMT2Q9H2M3 363 aa16.9■□□□□ 0.3
VTI1A-203ENST00000472892 PDZD7Q9H5P4 517 aa16.9■□□□□ 0.3
VTI1A-203ENST00000472892 SFXN1Q9H9B4 322 aa16.9■□□□□ 0.3
VTI1A-203ENST00000472892 TSHZ2Q9NRE2 1034 aa16.9■□□□□ 0.3
VTI1A-203ENST00000472892 CHST7Q9NS84 486 aa16.9■□□□□ 0.3
VTI1A-203ENST00000472892 KLK14Q9P0G3 267 aa16.9■□□□□ 0.3
VTI1A-203ENST00000472892 DAXXQ9UER7 740 aaPredicted RBP16.9■□□□□ 0.3
VTI1A-203ENST00000472892 PARP2Q9UGN5 583 aa16.9■□□□□ 0.3
VTI1A-203ENST00000472892 KIAA1024Q9UPX6 916 aa16.9■□□□□ 0.3
VTI1A-203ENST00000472892 PCDHB6Q9Y5E3 794 aa16.9■□□□□ 0.3
VTI1A-203ENST00000472892 C2CD4DB7Z1M9 353 aa16.89■□□□□ 0.29
VTI1A-203ENST00000472892 F8W810 466 aa16.89■□□□□ 0.29
VTI1A-203ENST00000472892 LAD1O00515 517 aa16.89■□□□□ 0.29
VTI1A-203ENST00000472892 C2CD2LO14523 706 aa16.89■□□□□ 0.29
VTI1A-203ENST00000472892 N4BP3O15049 544 aa16.89■□□□□ 0.29
VTI1A-203ENST00000472892 TEX28O15482 410 aa16.89■□□□□ 0.29
VTI1A-203ENST00000472892 SP100P23497 879 aaPredicted RBP16.89■□□□□ 0.29
VTI1A-203ENST00000472892 GLUD2P49448 558 aa16.89■□□□□ 0.29
VTI1A-203ENST00000472892 DSG1Q02413 1049 aa16.89■□□□□ 0.29
VTI1A-203ENST00000472892 GRIK3Q13003 919 aa16.89■□□□□ 0.29
VTI1A-203ENST00000472892 PRPF4BQ13523 1007 aaKnown RBP16.89■□□□□ 0.29
VTI1A-203ENST00000472892 PPP2R5AQ15172 486 aa16.89■□□□□ 0.29
VTI1A-203ENST00000472892 GPR149Q86SP6 731 aa16.89■□□□□ 0.29
VTI1A-203ENST00000472892 GPR65Q8IYL9 337 aa16.89■□□□□ 0.29
VTI1A-203ENST00000472892 FEZF2Q8TBJ5 459 aa16.89■□□□□ 0.29
VTI1A-203ENST00000472892 ASIC4Q96FT7 647 aa16.89■□□□□ 0.29
VTI1A-203ENST00000472892 USTQ9Y2C2 406 aa16.89■□□□□ 0.29
VTI1A-203ENST00000472892 ST18O60284 1047 aa16.88■□□□□ 0.29
VTI1A-203ENST00000472892 C1RP00736 705 aa16.88■□□□□ 0.29
VTI1A-203ENST00000472892 PRKCBP05771 671 aa16.88■□□□□ 0.29
VTI1A-203ENST00000472892 PRPHP41219 470 aa16.88■□□□□ 0.29
VTI1A-203ENST00000472892 EFNA5P52803 228 aa16.88■□□□□ 0.29
VTI1A-203ENST00000472892 IL17AQ16552 155 aa16.88■□□□□ 0.29
VTI1A-203ENST00000472892 ZDHHC14Q8IZN3 488 aa16.88■□□□□ 0.29
VTI1A-203ENST00000472892 DEPTORQ8TB45 409 aa16.88■□□□□ 0.29
VTI1A-203ENST00000472892 KIFAP3Q92845 792 aa16.88■□□□□ 0.29
VTI1A-203ENST00000472892 IFT74Q96LB3 600 aa16.88■□□□□ 0.29
VTI1A-203ENST00000472892 RAB34Q9BZG1 259 aa16.88■□□□□ 0.29
VTI1A-203ENST00000472892 GPR62Q9BZJ7 368 aa16.88■□□□□ 0.29
VTI1A-203ENST00000472892 POLD4Q9HCU8 107 aa16.88■□□□□ 0.29
VTI1A-203ENST00000472892 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.88■□□□□ 0.29
VTI1A-203ENST00000472892 DDX19AQ9NUU7 478 aaKnown RBP16.88■□□□□ 0.29
VTI1A-203ENST00000472892 KIF3AQ9Y496 699 aa16.88■□□□□ 0.29
VTI1A-203ENST00000472892 EDN1P05305 212 aa16.87■□□□□ 0.29
VTI1A-203ENST00000472892 ADH1AP07327 375 aa16.87■□□□□ 0.29
VTI1A-203ENST00000472892 TUSC3Q13454 348 aa16.87■□□□□ 0.29
VTI1A-203ENST00000472892 FUT10Q6P4F1 479 aa16.87■□□□□ 0.29
VTI1A-203ENST00000472892 C15orf39Q6ZRI6 1047 aa16.87■□□□□ 0.29
VTI1A-203ENST00000472892 PLCD3Q8N3E9 789 aa16.87■□□□□ 0.29
VTI1A-203ENST00000472892 KREMEN2Q8NCW0 462 aa16.87■□□□□ 0.29
VTI1A-203ENST00000472892 CMASQ8NFW8 434 aaPredicted RBP16.87■□□□□ 0.29
VTI1A-203ENST00000472892 SNX29Q8TEQ0 813 aa16.87■□□□□ 0.29
VTI1A-203ENST00000472892 SNTG2Q9NY99 539 aa16.87■□□□□ 0.29
VTI1A-203ENST00000472892 DPP7Q9UHL4 492 aa16.87■□□□□ 0.29
VTI1A-203ENST00000472892 ADAM28Q9UKQ2 775 aa16.87■□□□□ 0.29
VTI1A-203ENST00000472892 DNM3Q9UQ16 869 aa16.87■□□□□ 0.29
VTI1A-203ENST00000472892 USP20Q9Y2K6 914 aa16.87■□□□□ 0.29
VTI1A-203ENST00000472892 MUC6Q6W4X9 2439 aa16.86■□□□□ 0.29
VTI1A-203ENST00000472892 PTGESO14684 152 aa16.86■□□□□ 0.29
VTI1A-203ENST00000472892 NAB2Q15742 525 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms