RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 EIF2AQ9BY44 585 aaKnown RBP10.45□□□□□ -0.74
VCL-204ENST00000472585 FOXQ1Q9C009 403 aa10.45□□□□□ -0.74
VCL-204ENST00000472585 RSAD1Q9HA92 442 aa10.45□□□□□ -0.74
VCL-204ENST00000472585 PIDD1Q9HB75 910 aa10.45□□□□□ -0.74
VCL-204ENST00000472585 RXFP1Q9HBX9 757 aa10.45□□□□□ -0.74
VCL-204ENST00000472585 WDR6Q9NNW5 1121 aaKnown RBP10.45□□□□□ -0.74
VCL-204ENST00000472585 MAN1C1Q9NR34 630 aa10.45□□□□□ -0.74
VCL-204ENST00000472585 MRPL17Q9NRX2 175 aaKnown RBP10.45□□□□□ -0.74
VCL-204ENST00000472585 AGPAT5Q9NUQ2 364 aa10.45□□□□□ -0.74
VCL-204ENST00000472585 TCEAL9Q9UHQ7 104 aa10.45□□□□□ -0.74
VCL-204ENST00000472585 GMEB2Q9UKD1 530 aa10.45□□□□□ -0.74
VCL-204ENST00000472585 SMG5Q9UPR3 1016 aaKnown RBP10.45□□□□□ -0.74
VCL-204ENST00000472585 FAN1Q9Y2M0 1017 aa10.45□□□□□ -0.74
VCL-204ENST00000472585 PCDHGA2Q9Y5H1 932 aa10.45□□□□□ -0.74
VCL-204ENST00000472585 SNX14Q9Y5W7 946 aa10.45□□□□□ -0.74
VCL-204ENST00000472585 ZFHX4Q86UP3 3567 aa10.45□□□□□ -0.74
VCL-204ENST00000472585 RALGAPA1Q6GYQ0 2036 aa10.45□□□□□ -0.74
VCL-204ENST00000472585 PATJQ8NI35 1801 aa10.44□□□□□ -0.74
VCL-204ENST00000472585 ANKRD11Q6UB99 2663 aaPredicted RBP10.44□□□□□ -0.74
VCL-204ENST00000472585 INPPL1O15357 1258 aa10.44□□□□□ -0.74
VCL-204ENST00000472585 SLC37A4O43826 429 aa10.44□□□□□ -0.74
VCL-204ENST00000472585 DTNBO60941 627 aa10.44□□□□□ -0.74
VCL-204ENST00000472585 SOD2P04179 222 aa10.44□□□□□ -0.74
VCL-204ENST00000472585 SRGAP2CP0DJJ0 459 aa10.44□□□□□ -0.74
VCL-204ENST00000472585 PDIA3P30101 505 aaKnown RBP10.44□□□□□ -0.74
VCL-204ENST00000472585 RAB27AP51159 221 aa10.44□□□□□ -0.74
VCL-204ENST00000472585 AK2P54819 239 aa10.44□□□□□ -0.74
VCL-204ENST00000472585 CCT2P78371 535 aaKnown RBP10.44□□□□□ -0.74
VCL-204ENST00000472585 CDC42EP1Q00587 391 aa10.44□□□□□ -0.74
VCL-204ENST00000472585 DMWDQ09019 674 aa10.44□□□□□ -0.74
VCL-204ENST00000472585 BMP2KLQ5H9B9 411 aa10.44□□□□□ -0.74
VCL-204ENST00000472585 PPM1JQ5JR12 505 aa10.44□□□□□ -0.74
VCL-204ENST00000472585 LILRA6Q6PI73 481 aa10.44□□□□□ -0.74
VCL-204ENST00000472585 FBXL16Q8N461 479 aa10.44□□□□□ -0.74
VCL-204ENST00000472585 GSTCDQ8NEC7 633 aa10.44□□□□□ -0.74
VCL-204ENST00000472585 RDM1Q8NG50 284 aa10.44□□□□□ -0.74
VCL-204ENST00000472585 CCDC12Q8WUD4 166 aaPredicted RBP10.44□□□□□ -0.74
VCL-204ENST00000472585 SMG7Q92540 1137 aaKnown RBP10.44□□□□□ -0.74
VCL-204ENST00000472585 RABGGTAQ92696 567 aa10.44□□□□□ -0.74
VCL-204ENST00000472585 TMEM175Q9BSA9 504 aa10.44□□□□□ -0.74
VCL-204ENST00000472585 SLC26A6Q9BXS9 759 aa10.44□□□□□ -0.74
VCL-204ENST00000472585 RNF26Q9BY78 433 aaPredicted RBP10.44□□□□□ -0.74
VCL-204ENST00000472585 CHST7Q9NS84 486 aa10.44□□□□□ -0.74
VCL-204ENST00000472585 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.44□□□□□ -0.74
VCL-204ENST00000472585 VAV3Q9UKW4 847 aa10.44□□□□□ -0.74
VCL-204ENST00000472585 PRG3Q9Y2Y8 225 aaPredicted RBP10.44□□□□□ -0.74
VCL-204ENST00000472585 HES2Q9Y543 173 aa10.44□□□□□ -0.74
VCL-204ENST00000472585 COL4A3BPQ9Y5P4 624 aa10.44□□□□□ -0.74
VCL-204ENST00000472585 WDR81Q562E7 1941 aa10.44□□□□□ -0.74
VCL-204ENST00000472585 MYH15Q9Y2K3 1946 aa10.44□□□□□ -0.74
VCL-204ENST00000472585 MTCL1Q9Y4B5 1905 aaKnown RBP10.44□□□□□ -0.74
VCL-204ENST00000472585 CCDC196A0A1B0GTZ2 297 aa10.43□□□□□ -0.74
VCL-204ENST00000472585 C2orf72A6NCS6 295 aa10.43□□□□□ -0.74
VCL-204ENST00000472585 TBC1D4O60343 1298 aa10.43□□□□□ -0.74
VCL-204ENST00000472585 ADH1AP07327 375 aa10.43□□□□□ -0.74
VCL-204ENST00000472585 SKIP12755 728 aa10.43□□□□□ -0.74
VCL-204ENST00000472585 IFNAR1P17181 557 aa10.43□□□□□ -0.74
VCL-204ENST00000472585 NCLP19338 710 aaKnown RBP10.43□□□□□ -0.74
VCL-204ENST00000472585 IGFBP6P24592 240 aaPredicted RBP10.43□□□□□ -0.74
VCL-204ENST00000472585 DNM2P50570 870 aa10.43□□□□□ -0.74
VCL-204ENST00000472585 EVCP57679 992 aa10.43□□□□□ -0.74
VCL-204ENST00000472585 STARD6P59095 220 aa10.43□□□□□ -0.74
VCL-204ENST00000472585 DSC1Q08554 894 aa10.43□□□□□ -0.74
VCL-204ENST00000472585 LAMTOR4Q0VGL1 99 aa10.43□□□□□ -0.74
VCL-204ENST00000472585 COL9A2Q14055 689 aaPredicted RBP10.43□□□□□ -0.74
VCL-204ENST00000472585 UBXN2BQ14CS0 331 aa10.43□□□□□ -0.74
VCL-204ENST00000472585 PALB2Q86YC2 1186 aa10.43□□□□□ -0.74
VCL-204ENST00000472585 BICD2Q8TD16 824 aa10.43□□□□□ -0.74
VCL-204ENST00000472585 PGBD4Q96DM1 585 aa10.43□□□□□ -0.74
VCL-204ENST00000472585 ZFP42Q96MM3 310 aa10.43□□□□□ -0.74
VCL-204ENST00000472585 JAKMIP1Q96N16 626 aaKnown RBP10.43□□□□□ -0.74
VCL-204ENST00000472585 FAM193BQ96PV7 902 aaPredicted RBP10.43□□□□□ -0.74
VCL-204ENST00000472585 GAD1Q99259 594 aa10.43□□□□□ -0.74
VCL-204ENST00000472585 LARP6Q9BRS8 491 aaKnown RBP10.43□□□□□ -0.74
VCL-204ENST00000472585 HERC2P3Q9BVR0 1158 aa10.43□□□□□ -0.74
VCL-204ENST00000472585 RHOBTB2Q9BYZ6 727 aa10.43□□□□□ -0.74
VCL-204ENST00000472585 GPR62Q9BZJ7 368 aa10.43□□□□□ -0.74
VCL-204ENST00000472585 INO80BQ9C086 356 aaPredicted RBP10.43□□□□□ -0.74
VCL-204ENST00000472585 NT5C3AQ9H0P0 336 aa10.43□□□□□ -0.74
VCL-204ENST00000472585 DHX33Q9H6R0 707 aaKnown RBP10.43□□□□□ -0.74
VCL-204ENST00000472585 SLC2A4RGQ9NR83 387 aa10.43□□□□□ -0.74
VCL-204ENST00000472585 ZSCAN32Q9NX65 697 aa10.43□□□□□ -0.74
VCL-204ENST00000472585 CACNG4Q9UBN1 327 aa10.43□□□□□ -0.74
VCL-204ENST00000472585 RAB23Q9ULC3 237 aa10.43□□□□□ -0.74
VCL-204ENST00000472585 SSX2IPQ9Y2D8 614 aa10.43□□□□□ -0.74
VCL-204ENST00000472585 IPPQ9Y573 584 aa10.43□□□□□ -0.74
VCL-204ENST00000472585 COL4A3Q01955 1670 aa10.43□□□□□ -0.74
VCL-204ENST00000472585 CNOT1A5YKK6 2376 aaKnown RBP10.43□□□□□ -0.74
VCL-204ENST00000472585 KANSL1LA0AUZ9 987 aa10.42□□□□□ -0.74
VCL-204ENST00000472585 ARL5CA6NH57 179 aa10.42□□□□□ -0.74
VCL-204ENST00000472585 ANHXE9PGG2 379 aa10.42□□□□□ -0.74
VCL-204ENST00000472585 TGM5O43548 720 aa10.42□□□□□ -0.74
VCL-204ENST00000472585 GLUD1P00367 558 aa10.42□□□□□ -0.74
VCL-204ENST00000472585 URODP06132 367 aa10.42□□□□□ -0.74
VCL-204ENST00000472585 LAMP2P13473 410 aa10.42□□□□□ -0.74
VCL-204ENST00000472585 RPL17P18621 184 aaKnown RBP10.42□□□□□ -0.74
VCL-204ENST00000472585 RPS6KB1P23443 525 aa10.42□□□□□ -0.74
VCL-204ENST00000472585 MAGEA9P43362 315 aa10.42□□□□□ -0.74
VCL-204ENST00000472585 SCNN1GP51170 649 aa10.42□□□□□ -0.74
VCL-204ENST00000472585 NLRP5P59047 1200 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms