RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 CYP46A1Q9Y6A2 500 aa11.25□□□□□ -0.61
SCAMP3-205ENST00000472397 NUMBLQ9Y6R0 609 aa11.25□□□□□ -0.61
SCAMP3-205ENST00000472397 SPTBN4Q9H254 2564 aa11.25□□□□□ -0.61
SCAMP3-205ENST00000472397 MYO15AQ9UKN7 3530 aa11.24□□□□□ -0.61
SCAMP3-205ENST00000472397 TTLL13PA6NNM8 815 aa11.24□□□□□ -0.61
SCAMP3-205ENST00000472397 CCL16O15467 120 aa11.24□□□□□ -0.61
SCAMP3-205ENST00000472397 ADAM12O43184 909 aa11.24□□□□□ -0.61
SCAMP3-205ENST00000472397 TADA2AO75478 443 aa11.24□□□□□ -0.61
SCAMP3-205ENST00000472397 ARF4P18085 180 aaPredicted RBP11.24□□□□□ -0.61
SCAMP3-205ENST00000472397 ATP2B1P20020 1258 aa11.24□□□□□ -0.61
SCAMP3-205ENST00000472397 CD72P21854 359 aa11.24□□□□□ -0.61
SCAMP3-205ENST00000472397 RFC5P40937 340 aa11.24□□□□□ -0.61
SCAMP3-205ENST00000472397 NUBP1P53384 320 aa11.24□□□□□ -0.61
SCAMP3-205ENST00000472397 GPC5P78333 572 aa11.24□□□□□ -0.61
SCAMP3-205ENST00000472397 MBTD1Q05BQ5 628 aa11.24□□□□□ -0.61
SCAMP3-205ENST00000472397 PPP2R5CQ13362 524 aa11.24□□□□□ -0.61
SCAMP3-205ENST00000472397 RTP2Q5QGT7 225 aa11.24□□□□□ -0.61
SCAMP3-205ENST00000472397 FUT10Q6P4F1 479 aa11.24□□□□□ -0.61
SCAMP3-205ENST00000472397 PARM1Q6UWI2 310 aa11.24□□□□□ -0.61
SCAMP3-205ENST00000472397 NECAB1Q8N987 351 aa11.24□□□□□ -0.61
SCAMP3-205ENST00000472397 DAGLBQ8NCG7 672 aa11.24□□□□□ -0.61
SCAMP3-205ENST00000472397 RMDN1Q96DB5 314 aa11.24□□□□□ -0.61
SCAMP3-205ENST00000472397 EIF2AK1Q9BQI3 630 aaKnown RBP11.24□□□□□ -0.61
SCAMP3-205ENST00000472397 RTP3Q9BQQ7 232 aa11.24□□□□□ -0.61
SCAMP3-205ENST00000472397 PHF20Q9BVI0 1012 aa11.24□□□□□ -0.61
SCAMP3-205ENST00000472397 COLEC11Q9BWP8 271 aa11.24□□□□□ -0.61
SCAMP3-205ENST00000472397 C22orf23Q9BZE7 217 aa11.24□□□□□ -0.61
SCAMP3-205ENST00000472397 NT5C3AQ9H0P0 336 aa11.24□□□□□ -0.61
SCAMP3-205ENST00000472397 CSRNP2Q9H175 543 aa11.24□□□□□ -0.61
SCAMP3-205ENST00000472397 POLR3FQ9H1D9 316 aaPredicted RBP11.24□□□□□ -0.61
SCAMP3-205ENST00000472397 KCNMB3Q9NPA1 279 aa11.24□□□□□ -0.61
SCAMP3-205ENST00000472397 KANSL3Q9P2N6 904 aa11.24□□□□□ -0.61
SCAMP3-205ENST00000472397 CNTNAP2Q9UHC6 1331 aa11.24□□□□□ -0.61
SCAMP3-205ENST00000472397 FAM186AA6NE01 2351 aa11.23□□□□□ -0.61
SCAMP3-205ENST00000472397 MED19A0JLT2 244 aaPredicted RBP11.23□□□□□ -0.61
SCAMP3-205ENST00000472397 USO1O60763 962 aaKnown RBP11.23□□□□□ -0.61
SCAMP3-205ENST00000472397 SLITRK3O94933 977 aa11.23□□□□□ -0.61
SCAMP3-205ENST00000472397 GLULP15104 373 aa11.23□□□□□ -0.61
SCAMP3-205ENST00000472397 GLRA2P23416 452 aa11.23□□□□□ -0.61
SCAMP3-205ENST00000472397 TXKP42681 527 aa11.23□□□□□ -0.61
SCAMP3-205ENST00000472397 EVCP57679 992 aa11.23□□□□□ -0.61
SCAMP3-205ENST00000472397 PTENP60484 403 aa11.23□□□□□ -0.61
SCAMP3-205ENST00000472397 DSG1Q02413 1049 aa11.23□□□□□ -0.61
SCAMP3-205ENST00000472397 SNW1Q13573 536 aaKnown RBP11.23□□□□□ -0.61
SCAMP3-205ENST00000472397 AMHR2Q16671 573 aa11.23□□□□□ -0.61
SCAMP3-205ENST00000472397 TMEM132AQ24JP5 1023 aa11.23□□□□□ -0.61
SCAMP3-205ENST00000472397 NOTUMQ6P988 496 aa11.23□□□□□ -0.61
SCAMP3-205ENST00000472397 DCLRE1AQ6PJP8 1040 aa11.23□□□□□ -0.61
SCAMP3-205ENST00000472397 C15orf39Q6ZRI6 1047 aa11.23□□□□□ -0.61
SCAMP3-205ENST00000472397 OTUD6AQ7L8S5 288 aa11.23□□□□□ -0.61
SCAMP3-205ENST00000472397 C4orf19Q8IY42 314 aa11.23□□□□□ -0.61
SCAMP3-205ENST00000472397 ITFG1Q8TB96 612 aa11.23□□□□□ -0.61
SCAMP3-205ENST00000472397 TCP11Q8WWU5 503 aa11.23□□□□□ -0.61
SCAMP3-205ENST00000472397 ING5Q8WYH8 240 aa11.23□□□□□ -0.61
SCAMP3-205ENST00000472397 FAM20AQ96MK3 541 aa11.23□□□□□ -0.61
SCAMP3-205ENST00000472397 RXFP1Q9HBX9 757 aa11.23□□□□□ -0.61
SCAMP3-205ENST00000472397 HCFC1R1Q9NWW0 138 aa11.23□□□□□ -0.61
SCAMP3-205ENST00000472397 IGSF9Q9P2J2 1179 aa11.23□□□□□ -0.61
SCAMP3-205ENST00000472397 MTF2Q9Y483 593 aaPredicted RBP11.23□□□□□ -0.61
SCAMP3-205ENST00000472397 DOCK6Q96HP0 2047 aa11.23□□□□□ -0.61
SCAMP3-205ENST00000472397 LRRIQ4A6NIV6 560 aa11.22□□□□□ -0.61
SCAMP3-205ENST00000472397 I3L4J1 428 aa11.22□□□□□ -0.61
SCAMP3-205ENST00000472397 CTDNEP1O95476 244 aa11.22□□□□□ -0.61
SCAMP3-205ENST00000472397 SP9P0CG40 484 aa11.22□□□□□ -0.61
SCAMP3-205ENST00000472397 SRFP11831 508 aa11.22□□□□□ -0.61
SCAMP3-205ENST00000472397 LAMP2P13473 410 aa11.22□□□□□ -0.61
SCAMP3-205ENST00000472397 FSHRP23945 695 aa11.22□□□□□ -0.61
SCAMP3-205ENST00000472397 DSC1Q08554 894 aa11.22□□□□□ -0.61
SCAMP3-205ENST00000472397 HTR4Q13639 388 aa11.22□□□□□ -0.61
SCAMP3-205ENST00000472397 FAM171A1Q5VUB5 890 aa11.22□□□□□ -0.61
SCAMP3-205ENST00000472397 CPLX2Q6PUV4 134 aaKnown RBP11.22□□□□□ -0.61
SCAMP3-205ENST00000472397 MOXD1Q6UVY6 613 aa11.22□□□□□ -0.61
SCAMP3-205ENST00000472397 NOSTRINQ8IVI9 506 aa11.22□□□□□ -0.61
SCAMP3-205ENST00000472397 RNF168Q8IYW5 571 aaPredicted RBP11.22□□□□□ -0.61
SCAMP3-205ENST00000472397 GSTCDQ8NEC7 633 aa11.22□□□□□ -0.61
SCAMP3-205ENST00000472397 CMASQ8NFW8 434 aaPredicted RBP11.22□□□□□ -0.61
SCAMP3-205ENST00000472397 STAMQ92783 540 aa11.22□□□□□ -0.61
SCAMP3-205ENST00000472397 FGF14Q92915 247 aa11.22□□□□□ -0.61
SCAMP3-205ENST00000472397 ZNF274Q96GC6 653 aaPredicted RBP11.22□□□□□ -0.61
SCAMP3-205ENST00000472397 CCDC43Q96MW1 224 aaKnown RBP11.22□□□□□ -0.61
SCAMP3-205ENST00000472397 KXD1Q9BQD3 176 aa11.22□□□□□ -0.61
SCAMP3-205ENST00000472397 ZSWIM4Q9H7M6 989 aa11.22□□□□□ -0.61
SCAMP3-205ENST00000472397 ARHGEF3Q9NR81 526 aa11.22□□□□□ -0.61
SCAMP3-205ENST00000472397 SNTG2Q9NY99 539 aa11.22□□□□□ -0.61
SCAMP3-205ENST00000472397 WNT16Q9UBV4 365 aa11.22□□□□□ -0.61
SCAMP3-205ENST00000472397 TPCN1Q9ULQ1 816 aa11.22□□□□□ -0.61
SCAMP3-205ENST00000472397 SIT1Q9Y3P8 196 aa11.22□□□□□ -0.61
SCAMP3-205ENST00000472397 ASAP2O43150 1006 aa11.21□□□□□ -0.61
SCAMP3-205ENST00000472397 DKC1O60832 514 aaKnown RBP eCLIP11.21□□□□□ -0.61
SCAMP3-205ENST00000472397 NR1I2O75469 434 aa11.21□□□□□ -0.61
SCAMP3-205ENST00000472397 KIF4AO95239 1232 aa11.21□□□□□ -0.61
SCAMP3-205ENST00000472397 BAG4O95429 457 aaKnown RBP11.21□□□□□ -0.61
SCAMP3-205ENST00000472397 LARGE1O95461 756 aa11.21□□□□□ -0.61
SCAMP3-205ENST00000472397 EFEMP2O95967 443 aa11.21□□□□□ -0.61
SCAMP3-205ENST00000472397 LMNAP02545 664 aaKnown RBP11.21□□□□□ -0.61
SCAMP3-205ENST00000472397 ARL2P36404 184 aa11.21□□□□□ -0.61
SCAMP3-205ENST00000472397 GUCY1B3Q02153 619 aa11.21□□□□□ -0.61
SCAMP3-205ENST00000472397 SPIRE1Q08AE8 756 aa11.21□□□□□ -0.61
SCAMP3-205ENST00000472397 NCBP1Q09161 790 aaKnown RBP11.21□□□□□ -0.61
SCAMP3-205ENST00000472397 TFDP1Q14186 410 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms