RNA–Protein interactions for RNA: ENST00000472378.1

TSPO-205, Transcript of translocator protein, humanhuman

TSL 2

Gene TSPO, Length 495 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-205ENST00000472378 HVCN1Q96D96 273 aa18.4■□□□□ 0.54
TSPO-205ENST00000472378 BICD1Q96G01 975 aa18.4■□□□□ 0.54
TSPO-205ENST00000472378 CCDC34Q96HJ3 373 aa18.4■□□□□ 0.54
TSPO-205ENST00000472378 TMEM175Q9BSA9 504 aa18.4■□□□□ 0.54
TSPO-205ENST00000472378 CCDC94Q9BW85 323 aaPredicted RBP18.4■□□□□ 0.54
TSPO-205ENST00000472378 APOL6Q9BWW8 343 aa18.4■□□□□ 0.54
TSPO-205ENST00000472378 NXF3Q9H4D5 531 aaKnown RBP18.4■□□□□ 0.54
TSPO-205ENST00000472378 ST6GALNAC4Q9H4F1 302 aa18.4■□□□□ 0.54
TSPO-205ENST00000472378 KCNH3Q9ULD8 1083 aa18.4■□□□□ 0.54
TSPO-205ENST00000472378 TRANK1O15050 2925 aa18.4■□□□□ 0.54
TSPO-205ENST00000472378 CHD7Q9P2D1 2997 aa18.39■□□□□ 0.54
TSPO-205ENST00000472378 COL4A4P53420 1690 aaPredicted RBP18.39■□□□□ 0.53
TSPO-205ENST00000472378 ZC3H11AO75152 810 aaKnown RBP eCLIP18.39■□□□□ 0.53
TSPO-205ENST00000472378 ALDH2P05091 517 aa18.39■□□□□ 0.53
TSPO-205ENST00000472378 ITGB1P05556 798 aa18.39■□□□□ 0.53
TSPO-205ENST00000472378 IDEP14735 1019 aa18.39■□□□□ 0.53
TSPO-205ENST00000472378 ZNF568Q3ZCX4 644 aa18.39■□□□□ 0.53
TSPO-205ENST00000472378 NT5DC1Q5TFE4 455 aa18.39■□□□□ 0.53
TSPO-205ENST00000472378 MPZL3Q6UWV2 235 aa18.39■□□□□ 0.53
TSPO-205ENST00000472378 CEP57L1Q8IYX8 460 aa18.39■□□□□ 0.53
TSPO-205ENST00000472378 SPPL3Q8TCT6 385 aa18.39■□□□□ 0.53
TSPO-205ENST00000472378 LRRC15Q8TF66 581 aa18.39■□□□□ 0.53
TSPO-205ENST00000472378 PPM1EQ8WY54 764 aa18.39■□□□□ 0.53
TSPO-205ENST00000472378 TMEM169Q96HH4 297 aa18.39■□□□□ 0.53
TSPO-205ENST00000472378 GAD1Q99259 594 aa18.39■□□□□ 0.53
TSPO-205ENST00000472378 TARS2Q9BW92 718 aaKnown RBP18.39■□□□□ 0.53
TSPO-205ENST00000472378 NSUN3Q9H649 340 aaKnown RBP18.39■□□□□ 0.53
TSPO-205ENST00000472378 KBTBD4Q9NVX7 518 aa18.39■□□□□ 0.53
TSPO-205ENST00000472378 TBX20Q9UMR3 447 aa18.39■□□□□ 0.53
TSPO-205ENST00000472378 KIAA1671Q9BY89 1806 aa18.38■□□□□ 0.53
TSPO-205ENST00000472378 GOLGA6L4A6NEF3 574 aa18.38■□□□□ 0.53
TSPO-205ENST00000472378 MYMKA6NI61 221 aa18.38■□□□□ 0.53
TSPO-205ENST00000472378 HNRNPDLO14979 420 aaKnown RBP18.38■□□□□ 0.53
TSPO-205ENST00000472378 POLR2DO15514 142 aaKnown RBP18.38■□□□□ 0.53
TSPO-205ENST00000472378 CLDN3O15551 220 aa18.38■□□□□ 0.53
TSPO-205ENST00000472378 MLH1P40692 756 aa18.38■□□□□ 0.53
TSPO-205ENST00000472378 MATR3P43243 847 aaKnown RBP eCLIP18.38■□□□□ 0.53
TSPO-205ENST00000472378 LIG4P49917 911 aa18.38■□□□□ 0.53
TSPO-205ENST00000472378 BCAR1P56945 870 aa18.38■□□□□ 0.53
TSPO-205ENST00000472378 GRIK3Q13003 919 aa18.38■□□□□ 0.53
TSPO-205ENST00000472378 SKIV2LQ15477 1246 aaKnown RBP18.38■□□□□ 0.53
TSPO-205ENST00000472378 CCDC85BQ15834 202 aaPredicted RBP18.38■□□□□ 0.53
TSPO-205ENST00000472378 E2F4Q16254 413 aa18.38■□□□□ 0.53
TSPO-205ENST00000472378 CDR2LQ86X02 465 aaPredicted RBP18.38■□□□□ 0.53
TSPO-205ENST00000472378 MRPS27Q92552 414 aaKnown RBP18.38■□□□□ 0.53
TSPO-205ENST00000472378 MRPL44Q9H9J2 332 aaKnown RBP18.38■□□□□ 0.53
TSPO-205ENST00000472378 ALG13Q9NP73 1137 aaKnown RBP18.38■□□□□ 0.53
TSPO-205ENST00000472378 TLR9Q9NR96 1032 aa18.38■□□□□ 0.53
TSPO-205ENST00000472378 OLFML3Q9NRN5 406 aa18.38■□□□□ 0.53
TSPO-205ENST00000472378 EXOC7Q9UPT5 735 aa18.38■□□□□ 0.53
TSPO-205ENST00000472378 HES2Q9Y543 173 aa18.38■□□□□ 0.53
TSPO-205ENST00000472378 PCDHB13Q9Y5F0 798 aa18.38■□□□□ 0.53
TSPO-205ENST00000472378 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.38■□□□□ 0.53
TSPO-205ENST00000472378 TCHHQ07283 1943 aa18.38■□□□□ 0.53
TSPO-205ENST00000472378 A0A087X0B3 334 aa18.37■□□□□ 0.53
TSPO-205ENST00000472378 MEIS3P2A8K0S8 358 aa18.37■□□□□ 0.53
TSPO-205ENST00000472378 GRM6O15303 877 aa18.37■□□□□ 0.53
TSPO-205ENST00000472378 POMCP01189 267 aa18.37■□□□□ 0.53
TSPO-205ENST00000472378 AKAP5P24588 427 aa18.37■□□□□ 0.53
TSPO-205ENST00000472378 GRM5P41594 1212 aa18.37■□□□□ 0.53
TSPO-205ENST00000472378 GTF2BQ00403 316 aa18.37■□□□□ 0.53
TSPO-205ENST00000472378 AAK1Q2M2I8 961 aa18.37■□□□□ 0.53
TSPO-205ENST00000472378 HERC4Q5GLZ8 1057 aaPredicted RBP18.37■□□□□ 0.53
TSPO-205ENST00000472378 SLFN12LQ6IEE8 588 aa18.37■□□□□ 0.53
TSPO-205ENST00000472378 CNNM4Q6P4Q7 775 aa18.37■□□□□ 0.53
TSPO-205ENST00000472378 TAS1R3Q7RTX0 852 aa18.37■□□□□ 0.53
TSPO-205ENST00000472378 MICAL1Q8TDZ2 1067 aa18.37■□□□□ 0.53
TSPO-205ENST00000472378 POF1BQ8WVV4 589 aa18.37■□□□□ 0.53
TSPO-205ENST00000472378 DNAJC19Q96DA6 116 aa18.37■□□□□ 0.53
TSPO-205ENST00000472378 GBP3Q9H0R5 595 aa18.37■□□□□ 0.53
TSPO-205ENST00000472378 NRDE2Q9H7Z3 1164 aa18.37■□□□□ 0.53
TSPO-205ENST00000472378 PANK4Q9NVE7 773 aa18.37■□□□□ 0.53
TSPO-205ENST00000472378 COG5Q9UP83 839 aa18.37■□□□□ 0.53
TSPO-205ENST00000472378 FAN1Q9Y2M0 1017 aa18.37■□□□□ 0.53
TSPO-205ENST00000472378 A0A1W2PQ27 194 aa18.36■□□□□ 0.53
TSPO-205ENST00000472378 A0A1W2PQ64 194 aa18.36■□□□□ 0.53
TSPO-205ENST00000472378 A0A1W2PQD8 194 aa18.36■□□□□ 0.53
TSPO-205ENST00000472378 TTLL13PA6NNM8 815 aa18.36■□□□□ 0.53
TSPO-205ENST00000472378 TDRD15B5MCY1 1934 aaKnown RBP18.36■□□□□ 0.53
TSPO-205ENST00000472378 PIGRP01833 764 aa18.36■□□□□ 0.53
TSPO-205ENST00000472378 MYL1P05976 194 aa18.36■□□□□ 0.53
TSPO-205ENST00000472378 PROZP22891 400 aa18.36■□□□□ 0.53
TSPO-205ENST00000472378 NOLC1Q14978 699 aaKnown RBP eCLIP18.36■□□□□ 0.53
TSPO-205ENST00000472378 EEF1DP3Q658K8 133 aa18.36■□□□□ 0.53
TSPO-205ENST00000472378 ZNF720Q7Z2F6 126 aa18.36■□□□□ 0.53
TSPO-205ENST00000472378 SFR1Q86XK3 245 aa18.36■□□□□ 0.53
TSPO-205ENST00000472378 SLC39A11Q8N1S5 342 aa18.36■□□□□ 0.53
TSPO-205ENST00000472378 ACAP3Q96P50 834 aa18.36■□□□□ 0.53
TSPO-205ENST00000472378 RNF39Q9H2S5 420 aa18.36■□□□□ 0.53
TSPO-205ENST00000472378 PTPRHQ9HD43 1115 aa18.36■□□□□ 0.53
TSPO-205ENST00000472378 NGRNQ9NPE2 291 aaKnown RBP18.36■□□□□ 0.53
TSPO-205ENST00000472378 ANKFY1Q9P2R3 1169 aa18.36■□□□□ 0.53
TSPO-205ENST00000472378 RECQL4O94761 1208 aa18.35■□□□□ 0.53
TSPO-205ENST00000472378 THP07101 528 aa18.35■□□□□ 0.53
TSPO-205ENST00000472378 GALTP07902 379 aa18.35■□□□□ 0.53
TSPO-205ENST00000472378 SLFN14P0C7P3 912 aa18.35■□□□□ 0.53
TSPO-205ENST00000472378 SCNN1GP51170 649 aa18.35■□□□□ 0.53
TSPO-205ENST00000472378 ASIC1P78348 528 aa18.35■□□□□ 0.53
TSPO-205ENST00000472378 POSTNQ15063 836 aa18.35■□□□□ 0.53
TSPO-205ENST00000472378 IGSF21Q96ID5 467 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms