RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 EML5Q05BV3 1969 aa11.54□□□□□ -0.56
CDHR3-209ENST00000472116 ASCC3Q8N3C0 2202 aaKnown RBP11.54□□□□□ -0.56
CDHR3-209ENST00000472116 C4orf47A7E2U8 309 aa11.54□□□□□ -0.56
CDHR3-209ENST00000472116 IFIT3O14879 490 aaKnown RBP11.54□□□□□ -0.56
CDHR3-209ENST00000472116 RPP40O75818 363 aaKnown RBP11.54□□□□□ -0.56
CDHR3-209ENST00000472116 PAPSS2O95340 614 aaPredicted RBP11.54□□□□□ -0.56
CDHR3-209ENST00000472116 TOP3BO95985 862 aaKnown RBP11.54□□□□□ -0.56
CDHR3-209ENST00000472116 PSAPP07602 524 aa11.54□□□□□ -0.56
CDHR3-209ENST00000472116 HOXA9P31269 272 aa11.54□□□□□ -0.56
CDHR3-209ENST00000472116 RDXP35241 583 aaKnown RBP11.54□□□□□ -0.56
CDHR3-209ENST00000472116 DNM2P50570 870 aa11.54□□□□□ -0.56
CDHR3-209ENST00000472116 LILRA6Q6PI73 481 aa11.54□□□□□ -0.56
CDHR3-209ENST00000472116 C1orf228Q6PIY5 440 aa11.54□□□□□ -0.56
CDHR3-209ENST00000472116 WDR5BQ86VZ2 330 aa11.54□□□□□ -0.56
CDHR3-209ENST00000472116 ING5Q8WYH8 240 aa11.54□□□□□ -0.56
CDHR3-209ENST00000472116 ELSPBP1Q96BH3 223 aa11.54□□□□□ -0.56
CDHR3-209ENST00000472116 MKNK1Q9BUB5 465 aa11.54□□□□□ -0.56
CDHR3-209ENST00000472116 TRMT61BQ9BVS5 477 aaKnown RBP11.54□□□□□ -0.56
CDHR3-209ENST00000472116 SPZ1Q9BXG8 430 aa11.54□□□□□ -0.56
CDHR3-209ENST00000472116 NRBP2Q9NSY0 501 aa11.54□□□□□ -0.56
CDHR3-209ENST00000472116 GDE1Q9NZC3 331 aa11.54□□□□□ -0.56
CDHR3-209ENST00000472116 FBXW11Q9UKB1 542 aa11.54□□□□□ -0.56
CDHR3-209ENST00000472116 SAMM50Q9Y512 469 aa11.54□□□□□ -0.56
CDHR3-209ENST00000472116 MAFBQ9Y5Q3 323 aaPredicted RBP11.54□□□□□ -0.56
CDHR3-209ENST00000472116 PIAS3Q9Y6X2 628 aa11.54□□□□□ -0.56
CDHR3-209ENST00000472116 ACACAQ13085 2346 aa11.54□□□□□ -0.56
CDHR3-209ENST00000472116 AKAP13Q12802 2813 aa11.54□□□□□ -0.56
CDHR3-209ENST00000472116 ATG2BQ96BY7 2078 aa11.53□□□□□ -0.56
CDHR3-209ENST00000472116 RPL17P18621 184 aaKnown RBP11.53□□□□□ -0.56
CDHR3-209ENST00000472116 ATP4AP20648 1035 aa11.53□□□□□ -0.56
CDHR3-209ENST00000472116 CSRP1P21291 193 aaKnown RBP11.53□□□□□ -0.56
CDHR3-209ENST00000472116 KIAA1211LQ6NV74 962 aa11.53□□□□□ -0.56
CDHR3-209ENST00000472116 AGMOQ6ZNB7 445 aa11.53□□□□□ -0.56
CDHR3-209ENST00000472116 PROSER1Q86XN7 944 aa11.53□□□□□ -0.56
CDHR3-209ENST00000472116 SMAP1Q8IYB5 467 aaPredicted RBP11.53□□□□□ -0.56
CDHR3-209ENST00000472116 RNF168Q8IYW5 571 aaPredicted RBP11.53□□□□□ -0.56
CDHR3-209ENST00000472116 ZNF687Q8N1G0 1237 aa11.53□□□□□ -0.56
CDHR3-209ENST00000472116 GLIS3Q8NEA6 775 aa11.53□□□□□ -0.56
CDHR3-209ENST00000472116 FAM200AQ8TCP9 573 aa11.53□□□□□ -0.56
CDHR3-209ENST00000472116 GAB3Q8WWW8 586 aa11.53□□□□□ -0.56
CDHR3-209ENST00000472116 MCRS1Q96EZ8 462 aa11.53□□□□□ -0.56
CDHR3-209ENST00000472116 MSANTD3Q96H12 275 aa11.53□□□□□ -0.56
CDHR3-209ENST00000472116 MBOAT7Q96N66 472 aa11.53□□□□□ -0.56
CDHR3-209ENST00000472116 LZTS2Q9BRK4 669 aa11.53□□□□□ -0.56
CDHR3-209ENST00000472116 SMOC1Q9H4F8 434 aa11.53□□□□□ -0.56
CDHR3-209ENST00000472116 ZFP14Q9HCL3 533 aa11.53□□□□□ -0.56
CDHR3-209ENST00000472116 UBN1Q9NPG3 1134 aa11.53□□□□□ -0.56
CDHR3-209ENST00000472116 CHST7Q9NS84 486 aa11.53□□□□□ -0.56
CDHR3-209ENST00000472116 MSRB2Q9Y3D2 182 aa11.53□□□□□ -0.56
CDHR3-209ENST00000472116 COL4A2P08572 1712 aa11.52□□□□□ -0.56
CDHR3-209ENST00000472116 IGSF10Q6WRI0 2623 aa11.52□□□□□ -0.57
CDHR3-209ENST00000472116 K7ESF4 209 aa11.52□□□□□ -0.57
CDHR3-209ENST00000472116 CHRNB1P11230 501 aa11.52□□□□□ -0.57
CDHR3-209ENST00000472116 SMARCA1P28370 1054 aa11.52□□□□□ -0.57
CDHR3-209ENST00000472116 RAP1GAPP47736 663 aa11.52□□□□□ -0.57
CDHR3-209ENST00000472116 C19orf57Q0VDD7 668 aa11.52□□□□□ -0.57
CDHR3-209ENST00000472116 TROAPQ12815 778 aa11.52□□□□□ -0.57
CDHR3-209ENST00000472116 PTGDRQ13258 359 aa11.52□□□□□ -0.57
CDHR3-209ENST00000472116 GRM2Q14416 872 aa11.52□□□□□ -0.57
CDHR3-209ENST00000472116 COL28A1Q2UY09 1125 aa11.52□□□□□ -0.57
CDHR3-209ENST00000472116 PLA2G2CQ5R387 149 aa11.52□□□□□ -0.57
CDHR3-209ENST00000472116 FUT10Q6P4F1 479 aa11.52□□□□□ -0.57
CDHR3-209ENST00000472116 COLGALT2Q8IYK4 626 aa11.52□□□□□ -0.57
CDHR3-209ENST00000472116 LINC01465Q8N7H1 131 aa11.52□□□□□ -0.57
CDHR3-209ENST00000472116 CSGALNACT1Q8TDX6 532 aa11.52□□□□□ -0.57
CDHR3-209ENST00000472116 RILPL2Q969X0 211 aa11.52□□□□□ -0.57
CDHR3-209ENST00000472116 B3GALT6Q96L58 329 aa11.52□□□□□ -0.57
CDHR3-209ENST00000472116 APOL6Q9BWW8 343 aa11.52□□□□□ -0.57
CDHR3-209ENST00000472116 PLA2G2FQ9BZM2 168 aa11.52□□□□□ -0.57
CDHR3-209ENST00000472116 GABBR1Q9UBS5 961 aa11.52□□□□□ -0.57
CDHR3-209ENST00000472116 GPSM3Q9Y4H4 160 aa11.52□□□□□ -0.57
CDHR3-209ENST00000472116 PCDHA10Q9Y5I2 948 aa11.52□□□□□ -0.57
CDHR3-209ENST00000472116 THADAQ6YHU6 1953 aa11.52□□□□□ -0.57
CDHR3-209ENST00000472116 A0A087WZ62 844 aa11.51□□□□□ -0.57
CDHR3-209ENST00000472116 MEIS1O00470 390 aa11.51□□□□□ -0.57
CDHR3-209ENST00000472116 HYAL3O43820 417 aaPredicted RBP11.51□□□□□ -0.57
CDHR3-209ENST00000472116 FOSP01100 380 aaPredicted RBP11.51□□□□□ -0.57
CDHR3-209ENST00000472116 OATP04181 439 aa11.51□□□□□ -0.57
CDHR3-209ENST00000472116 CCNE1P24864 410 aa11.51□□□□□ -0.57
CDHR3-209ENST00000472116 GDI1P31150 447 aa11.51□□□□□ -0.57
CDHR3-209ENST00000472116 HOXA6P31267 233 aa11.51□□□□□ -0.57
CDHR3-209ENST00000472116 GNAQP50148 359 aa11.51□□□□□ -0.57
CDHR3-209ENST00000472116 ELF2Q15723 593 aa11.51□□□□□ -0.57
CDHR3-209ENST00000472116 DGKKQ5KSL6 1271 aa11.51□□□□□ -0.57
CDHR3-209ENST00000472116 TANGO2Q6ICL3 276 aa11.51□□□□□ -0.57
CDHR3-209ENST00000472116 ZNF746Q6NUN9 644 aaPredicted RBP11.51□□□□□ -0.57
CDHR3-209ENST00000472116 CYB5R4Q7L1T6 521 aa11.51□□□□□ -0.57
CDHR3-209ENST00000472116 KBTBD6Q86V97 674 aa11.51□□□□□ -0.57
CDHR3-209ENST00000472116 ZNF410Q86VK4 478 aa11.51□□□□□ -0.57
CDHR3-209ENST00000472116 PLA2G4DQ86XP0 818 aa11.51□□□□□ -0.57
CDHR3-209ENST00000472116 CNNM3Q8NE01 707 aa11.51□□□□□ -0.57
CDHR3-209ENST00000472116 SLC7A14Q8TBB6 771 aa11.51□□□□□ -0.57
CDHR3-209ENST00000472116 FDXACB1Q9BRP7 624 aaPredicted RBP11.51□□□□□ -0.57
CDHR3-209ENST00000472116 SLC32A1Q9H598 525 aa11.51□□□□□ -0.57
CDHR3-209ENST00000472116 ZNF334Q9HCZ1 680 aaPredicted RBP11.51□□□□□ -0.57
CDHR3-209ENST00000472116 TMEM9BQ9NQ34 198 aa11.51□□□□□ -0.57
CDHR3-209ENST00000472116 TRPV5Q9NQA5 729 aa11.51□□□□□ -0.57
CDHR3-209ENST00000472116 TBC1D22BQ9NU19 505 aa11.51□□□□□ -0.57
CDHR3-209ENST00000472116 ASXL3Q9C0F0 2248 aa11.5□□□□□ -0.57
CDHR3-209ENST00000472116 LOC400499M0QZD8 3231 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms