RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 TDRD15B5MCY1 1934 aaKnown RBP22.08■■□□□ 1.13
CCDC78-208ENST00000471861 C1RP00736 705 aa22.08■■□□□ 1.13
CCDC78-208ENST00000471861 GPC5P78333 572 aa22.08■■□□□ 1.13
CCDC78-208ENST00000471861 PPP2R5CQ13362 524 aa22.08■■□□□ 1.13
CCDC78-208ENST00000471861 RSPO4Q2I0M5 234 aaPredicted RBP22.08■■□□□ 1.13
CCDC78-208ENST00000471861 MOXD1Q6UVY6 613 aa22.08■■□□□ 1.13
CCDC78-208ENST00000471861 FERMT3Q86UX7 667 aa22.08■■□□□ 1.13
CCDC78-208ENST00000471861 FBXL16Q8N461 479 aa22.08■■□□□ 1.13
CCDC78-208ENST00000471861 JAKMIP1Q96N16 626 aaKnown RBP22.08■■□□□ 1.13
CCDC78-208ENST00000471861 CNTNAP3BQ96NU0 1288 aa22.08■■□□□ 1.13
CCDC78-208ENST00000471861 DDX23Q9BUQ8 820 aaKnown RBP22.08■■□□□ 1.13
CCDC78-208ENST00000471861 CNTNAP3Q9BZ76 1288 aa22.08■■□□□ 1.13
CCDC78-208ENST00000471861 NXF3Q9H4D5 531 aaKnown RBP22.08■■□□□ 1.13
CCDC78-208ENST00000471861 FNIP2Q9P278 1114 aa22.08■■□□□ 1.13
CCDC78-208ENST00000471861 DDX25Q9UHL0 483 aaKnown RBP22.08■■□□□ 1.13
CCDC78-208ENST00000471861 MIA3Q5JRA6 1907 aa22.08■■□□□ 1.12
CCDC78-208ENST00000471861 KMT2BQ9UMN6 2715 aaPredicted RBP22.07■■□□□ 1.12
CCDC78-208ENST00000471861 ZMYND10O75800 440 aa22.07■■□□□ 1.12
CCDC78-208ENST00000471861 RFC5P40937 340 aa22.07■■□□□ 1.12
CCDC78-208ENST00000471861 CCT2P78371 535 aaKnown RBP22.07■■□□□ 1.12
CCDC78-208ENST00000471861 NTHL1P78549 312 aa22.07■■□□□ 1.12
CCDC78-208ENST00000471861 EMC2Q15006 297 aa22.07■■□□□ 1.12
CCDC78-208ENST00000471861 AMHR2Q16671 573 aa22.07■■□□□ 1.12
CCDC78-208ENST00000471861 RABGGTAQ92696 567 aa22.07■■□□□ 1.12
CCDC78-208ENST00000471861 C22orf23Q9BZE7 217 aa22.07■■□□□ 1.12
CCDC78-208ENST00000471861 CACNG4Q9UBN1 327 aa22.07■■□□□ 1.12
CCDC78-208ENST00000471861 MTF2Q9Y483 593 aaPredicted RBP22.07■■□□□ 1.12
CCDC78-208ENST00000471861 KINO60870 393 aaKnown RBP22.06■■□□□ 1.12
CCDC78-208ENST00000471861 KRT37O76014 449 aa22.06■■□□□ 1.12
CCDC78-208ENST00000471861 ERLIN2O94905 339 aa22.06■■□□□ 1.12
CCDC78-208ENST00000471861 FSHRP23945 695 aa22.06■■□□□ 1.12
CCDC78-208ENST00000471861 PDIA3P30101 505 aaKnown RBP22.06■■□□□ 1.12
CCDC78-208ENST00000471861 SNW1Q13573 536 aaKnown RBP22.06■■□□□ 1.12
CCDC78-208ENST00000471861 USP41Q3LFD5 358 aa22.06■■□□□ 1.12
CCDC78-208ENST00000471861 PRSS55Q6UWB4 352 aaPredicted RBP22.06■■□□□ 1.12
CCDC78-208ENST00000471861 GPR65Q8IYL9 337 aa22.06■■□□□ 1.12
CCDC78-208ENST00000471861 BLIDQ8IZY5 108 aa22.06■■□□□ 1.12
CCDC78-208ENST00000471861 DAGLBQ8NCG7 672 aa22.06■■□□□ 1.12
CCDC78-208ENST00000471861 APOL6Q9BWW8 343 aa22.06■■□□□ 1.12
CCDC78-208ENST00000471861 KCNMB3Q9NPA1 279 aa22.06■■□□□ 1.12
CCDC78-208ENST00000471861 XPNPEP1Q9NQW7 623 aa22.06■■□□□ 1.12
CCDC78-208ENST00000471861 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.06■■□□□ 1.12
CCDC78-208ENST00000471861 FBXW11Q9UKB1 542 aa22.06■■□□□ 1.12
CCDC78-208ENST00000471861 ADAM28Q9UKQ2 775 aa22.06■■□□□ 1.12
CCDC78-208ENST00000471861 PPME1Q9Y570 386 aa22.06■■□□□ 1.12
CCDC78-208ENST00000471861 SNX14Q9Y5W7 946 aa22.06■■□□□ 1.12
CCDC78-208ENST00000471861 KANSL1LA0AUZ9 987 aa22.05■■□□□ 1.12
CCDC78-208ENST00000471861 ZBTB39O15060 712 aa22.05■■□□□ 1.12
CCDC78-208ENST00000471861 RPS6KB1P23443 525 aa22.05■■□□□ 1.12
CCDC78-208ENST00000471861 INF2Q27J81 1249 aa22.05■■□□□ 1.12
CCDC78-208ENST00000471861 RTP2Q5QGT7 225 aa22.05■■□□□ 1.12
CCDC78-208ENST00000471861 NOTUMQ6P988 496 aa22.05■■□□□ 1.12
CCDC78-208ENST00000471861 BLOC1S2Q6QNY1 142 aa22.05■■□□□ 1.12
CCDC78-208ENST00000471861 GRASPQ7Z6J2 395 aaPredicted RBP22.05■■□□□ 1.12
CCDC78-208ENST00000471861 CCDC51Q96ER9 411 aa22.05■■□□□ 1.12
CCDC78-208ENST00000471861 AIFM3Q96NN9 605 aa22.05■■□□□ 1.12
CCDC78-208ENST00000471861 LXNQ9BS40 222 aa22.05■■□□□ 1.12
CCDC78-208ENST00000471861 COLEC11Q9BWP8 271 aa22.05■■□□□ 1.12
CCDC78-208ENST00000471861 CSRNP2Q9H175 543 aa22.05■■□□□ 1.12
CCDC78-208ENST00000471861 CDH7Q9ULB5 785 aa22.05■■□□□ 1.12
CCDC78-208ENST00000471861 P4HBP07237 508 aaKnown RBP22.04■■□□□ 1.12
CCDC78-208ENST00000471861 AXLP30530 894 aa22.04■■□□□ 1.12
CCDC78-208ENST00000471861 YWHABP31946 246 aaKnown RBP22.04■■□□□ 1.12
CCDC78-208ENST00000471861 EVCP57679 992 aa22.04■■□□□ 1.12
CCDC78-208ENST00000471861 PTENP60484 403 aa22.04■■□□□ 1.12
CCDC78-208ENST00000471861 MLF2Q15773 248 aaPredicted RBP22.04■■□□□ 1.12
CCDC78-208ENST00000471861 ZNF528Q3MIS6 628 aa22.04■■□□□ 1.12
CCDC78-208ENST00000471861 C4orf19Q8IY42 314 aa22.04■■□□□ 1.12
CCDC78-208ENST00000471861 PAAF1Q9BRP4 392 aa22.04■■□□□ 1.12
CCDC78-208ENST00000471861 RGL1Q9NZL6 768 aa22.04■■□□□ 1.12
CCDC78-208ENST00000471861 GIT1Q9Y2X7 761 aa22.04■■□□□ 1.12
CCDC78-208ENST00000471861 ZFP37Q9Y6Q3 630 aaPredicted RBP22.04■■□□□ 1.12
CCDC78-208ENST00000471861 TPRP12270 2363 aaKnown RBP22.03■■□□□ 1.12
CCDC78-208ENST00000471861 ASAP2O43150 1006 aa22.03■■□□□ 1.12
CCDC78-208ENST00000471861 ARF4P18085 180 aaPredicted RBP22.03■■□□□ 1.12
CCDC78-208ENST00000471861 AKAP5P24588 427 aa22.03■■□□□ 1.12
CCDC78-208ENST00000471861 MBTD1Q05BQ5 628 aa22.03■■□□□ 1.12
CCDC78-208ENST00000471861 IFNLR1Q8IU57 520 aaPredicted RBP22.03■■□□□ 1.12
CCDC78-208ENST00000471861 EXOC8Q8IYI6 725 aa22.03■■□□□ 1.12
CCDC78-208ENST00000471861 TCP11Q8WWU5 503 aa22.03■■□□□ 1.12
CCDC78-208ENST00000471861 SHDQ96IW2 340 aa22.03■■□□□ 1.12
CCDC78-208ENST00000471861 SPATA6Q9NWH7 488 aaPredicted RBP22.03■■□□□ 1.12
CCDC78-208ENST00000471861 FBXO4Q9UKT5 387 aa22.03■■□□□ 1.12
CCDC78-208ENST00000471861 SPTBN2O15020 2390 aa22.02■■□□□ 1.12
CCDC78-208ENST00000471861 SPTLC1O15269 473 aa22.02■■□□□ 1.12
CCDC78-208ENST00000471861 B4GALT5O43286 388 aa22.02■■□□□ 1.12
CCDC78-208ENST00000471861 DKC1O60832 514 aaKnown RBP eCLIP22.02■■□□□ 1.12
CCDC78-208ENST00000471861 NR1I2O75469 434 aa22.02■■□□□ 1.12
CCDC78-208ENST00000471861 HSPA4P34932 840 aa22.02■■□□□ 1.12
CCDC78-208ENST00000471861 PCBP1Q15365 356 aaKnown RBP eCLIP22.02■■□□□ 1.12
CCDC78-208ENST00000471861 VARS2Q5ST30 1063 aaKnown RBP22.02■■□□□ 1.12
CCDC78-208ENST00000471861 CDR2LQ86X02 465 aaPredicted RBP22.02■■□□□ 1.12
CCDC78-208ENST00000471861 ITFG1Q8TB96 612 aa22.02■■□□□ 1.12
CCDC78-208ENST00000471861 ASAP3Q8TDY4 903 aa22.02■■□□□ 1.12
CCDC78-208ENST00000471861 HAS1Q92839 578 aa22.02■■□□□ 1.12
CCDC78-208ENST00000471861 FGF13Q92913 245 aa22.02■■□□□ 1.12
CCDC78-208ENST00000471861 MTRQ99707 1265 aa22.02■■□□□ 1.12
CCDC78-208ENST00000471861 CLSTN3Q9BQT9 956 aa22.02■■□□□ 1.12
CCDC78-208ENST00000471861 INO80B-WBP1J3KQ70 363 aa22.01■■□□□ 1.11
CCDC78-208ENST00000471861 LAMTOR5O43504 91 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms