RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 HOXB13Q92826 284 aaPredicted RBP4.45□□□□□ -1.7
COPS3-206ENST00000471414 CEP95Q96GE4 821 aa4.45□□□□□ -1.7
COPS3-206ENST00000471414 RAX2Q96IS3 184 aa4.45□□□□□ -1.7
COPS3-206ENST00000471414 MLST8Q9BVC4 326 aa4.45□□□□□ -1.7
COPS3-206ENST00000471414 ZNF768Q9H5H4 540 aaKnown RBP4.45□□□□□ -1.7
COPS3-206ENST00000471414 NRDE2Q9H7Z3 1164 aa4.45□□□□□ -1.7
COPS3-206ENST00000471414 TMA7Q9Y2S6 64 aaKnown RBP4.45□□□□□ -1.7
COPS3-206ENST00000471414 DMRT1Q9Y5R6 373 aa4.45□□□□□ -1.7
COPS3-206ENST00000471414 ATRNL1Q5VV63 1379 aa4.44□□□□□ -1.7
COPS3-206ENST00000471414 A0A087X1B8 175 aa4.44□□□□□ -1.7
COPS3-206ENST00000471414 GRID2IPA4D2P6 1211 aa4.44□□□□□ -1.7
COPS3-206ENST00000471414 MARCH11A6NNE9 402 aa4.44□□□□□ -1.7
COPS3-206ENST00000471414 B5MCH6 92 aa4.44□□□□□ -1.7
COPS3-206ENST00000471414 K7ESF4 209 aa4.44□□□□□ -1.7
COPS3-206ENST00000471414 WNT10BO00744 389 aa4.44□□□□□ -1.7
COPS3-206ENST00000471414 PPFIA4O75335 1185 aa4.44□□□□□ -1.7
COPS3-206ENST00000471414 ZSCAN20P17040 1043 aaPredicted RBP4.44□□□□□ -1.7
COPS3-206ENST00000471414 PROZP22891 400 aa4.44□□□□□ -1.7
COPS3-206ENST00000471414 APOBEC3AP31941 199 aaPredicted RBP4.44□□□□□ -1.7
COPS3-206ENST00000471414 SOX5P35711 763 aa4.44□□□□□ -1.7
COPS3-206ENST00000471414 FAM189BP81408 668 aa4.44□□□□□ -1.7
COPS3-206ENST00000471414 BMT2Q1RMZ1 405 aa4.44□□□□□ -1.7
COPS3-206ENST00000471414 MUM1Q2TAK8 710 aa4.44□□□□□ -1.7
COPS3-206ENST00000471414 ANKS6Q68DC2 871 aa4.44□□□□□ -1.7
COPS3-206ENST00000471414 XYLT1Q86Y38 959 aa4.44□□□□□ -1.7
COPS3-206ENST00000471414 CMIPQ8IY22 773 aa4.44□□□□□ -1.7
COPS3-206ENST00000471414 UBR7Q8N806 425 aa4.44□□□□□ -1.7
COPS3-206ENST00000471414 ZNF480Q8WV37 535 aa4.44□□□□□ -1.7
COPS3-206ENST00000471414 VTA1Q9NP79 307 aa4.44□□□□□ -1.7
COPS3-206ENST00000471414 SORCS3Q9UPU3 1222 aa4.44□□□□□ -1.7
COPS3-206ENST00000471414 CLCA2Q9UQC9 943 aa4.44□□□□□ -1.7
COPS3-206ENST00000471414 REXO2Q9Y3B8 237 aaKnown RBP4.44□□□□□ -1.7
COPS3-206ENST00000471414 RPTORQ8N122 1335 aa4.44□□□□□ -1.7
COPS3-206ENST00000471414 TMEM200CA6NKL6 621 aa4.43□□□□□ -1.7
COPS3-206ENST00000471414 TBKBP1A7MCY6 615 aa4.43□□□□□ -1.7
COPS3-206ENST00000471414 OVOL3O00110 214 aa4.43□□□□□ -1.7
COPS3-206ENST00000471414 LEFTY2O00292 366 aa4.43□□□□□ -1.7
COPS3-206ENST00000471414 PRAMEF4O60810 478 aa4.43□□□□□ -1.7
COPS3-206ENST00000471414 RPS6KA4O75676 772 aa4.43□□□□□ -1.7
COPS3-206ENST00000471414 INHBEP58166 350 aa4.43□□□□□ -1.7
COPS3-206ENST00000471414 APBA1Q02410 837 aa4.43□□□□□ -1.7
COPS3-206ENST00000471414 STAT4Q14765 748 aa4.43□□□□□ -1.7
COPS3-206ENST00000471414 ADRM1Q16186 407 aa4.43□□□□□ -1.7
COPS3-206ENST00000471414 SMN1Q16637 294 aaKnown RBP4.43□□□□□ -1.7
COPS3-206ENST00000471414 ANO4Q32M45 955 aa4.43□□□□□ -1.7
COPS3-206ENST00000471414 MFSD14BQ5SR56 506 aa4.43□□□□□ -1.7
COPS3-206ENST00000471414 PRAMEF14Q5SWL7 426 aa4.43□□□□□ -1.7
COPS3-206ENST00000471414 LHFPL2Q6ZUX7 228 aa4.43□□□□□ -1.7
COPS3-206ENST00000471414 Q6ZVL8 140 aa4.43□□□□□ -1.7
COPS3-206ENST00000471414 HDGFL2Q7Z4V5 671 aaPredicted RBP4.43□□□□□ -1.7
COPS3-206ENST00000471414 CPT1CQ8TCG5 803 aa4.43□□□□□ -1.7
COPS3-206ENST00000471414 CHAC2Q8WUX2 184 aa4.43□□□□□ -1.7
COPS3-206ENST00000471414 MYEOVQ96EZ4 313 aa4.43□□□□□ -1.7
COPS3-206ENST00000471414 DCLRE1CQ96SD1 692 aaKnown RBP4.43□□□□□ -1.7
COPS3-206ENST00000471414 DPP7Q9UHL4 492 aa4.43□□□□□ -1.7
COPS3-206ENST00000471414 GAGE12BA1L429 117 aa4.42□□□□□ -1.7
COPS3-206ENST00000471414 GAGE12HA6NDE8 117 aa4.42□□□□□ -1.7
COPS3-206ENST00000471414 TMEM191CA6NGB0 347 aa4.42□□□□□ -1.7
COPS3-206ENST00000471414 DIRC3C9JPN6 131 aa4.42□□□□□ -1.7
COPS3-206ENST00000471414 PJA2O43164 708 aa4.42□□□□□ -1.7
COPS3-206ENST00000471414 GPR39O43194 453 aa4.42□□□□□ -1.7
COPS3-206ENST00000471414 ADCY6O43306 1168 aa4.42□□□□□ -1.7
COPS3-206ENST00000471414 PHF2O75151 1096 aa4.42□□□□□ -1.7
COPS3-206ENST00000471414 RECQL4O94761 1208 aa4.42□□□□□ -1.7
COPS3-206ENST00000471414 SCAF4O95104 1147 aaKnown RBP4.42□□□□□ -1.7
COPS3-206ENST00000471414 GPR3P46089 330 aa4.42□□□□□ -1.7
COPS3-206ENST00000471414 FLT3LGP49771 235 aa4.42□□□□□ -1.7
COPS3-206ENST00000471414 ERVK-21P61565 698 aa4.42□□□□□ -1.7
COPS3-206ENST00000471414 PPP3CAQ08209 521 aa4.42□□□□□ -1.7
COPS3-206ENST00000471414 BEAN1Q3B7T3 259 aa4.42□□□□□ -1.7
COPS3-206ENST00000471414 FAM102AQ5T9C2 384 aaPredicted RBP4.42□□□□□ -1.7
COPS3-206ENST00000471414 GDF7Q7Z4P5 450 aa4.42□□□□□ -1.7
COPS3-206ENST00000471414 TRMT2AQ8IZ69 625 aaKnown RBP4.42□□□□□ -1.7
COPS3-206ENST00000471414 MDM1Q8TC05 714 aa4.42□□□□□ -1.7
COPS3-206ENST00000471414 AUTS2Q8WXX7 1259 aa4.42□□□□□ -1.7
COPS3-206ENST00000471414 CDC5LQ99459 802 aaKnown RBP4.42□□□□□ -1.7
COPS3-206ENST00000471414 NEU1Q99519 415 aa4.42□□□□□ -1.7
COPS3-206ENST00000471414 USP35Q9P2H5 1018 aa4.42□□□□□ -1.7
COPS3-206ENST00000471414 COL4A3Q01955 1670 aa4.41□□□□□ -1.7
COPS3-206ENST00000471414 CENPVL1A0A0U1RR11 272 aa4.41□□□□□ -1.7
COPS3-206ENST00000471414 PRR5-ARHGAP8B1AHC4 643 aa4.41□□□□□ -1.7
COPS3-206ENST00000471414 HSP90B1P14625 803 aaKnown RBP4.41□□□□□ -1.7
COPS3-206ENST00000471414 ALOX15P16050 662 aaPredicted RBP4.41□□□□□ -1.7
COPS3-206ENST00000471414 GUCY1A2P33402 732 aa4.41□□□□□ -1.7
COPS3-206ENST00000471414 MTNR1BP49286 362 aa4.41□□□□□ -1.7
COPS3-206ENST00000471414 FAPQ12884 760 aa4.41□□□□□ -1.7
COPS3-206ENST00000471414 FAM47AQ5JRC9 791 aa4.41□□□□□ -1.7
COPS3-206ENST00000471414 GJC2Q5T442 439 aaPredicted RBP4.41□□□□□ -1.7
COPS3-206ENST00000471414 MBNL2Q5VZF2 373 aaKnown RBP4.41□□□□□ -1.7
COPS3-206ENST00000471414 LAIR1Q6GTX8 287 aa4.41□□□□□ -1.7
COPS3-206ENST00000471414 ZNF572Q7Z3I7 529 aaPredicted RBP4.41□□□□□ -1.7
COPS3-206ENST00000471414 VRK3Q8IV63 474 aa4.41□□□□□ -1.7
COPS3-206ENST00000471414 GPR156Q8NFN8 814 aa4.41□□□□□ -1.7
COPS3-206ENST00000471414 OR7D4Q8NG98 312 aa4.41□□□□□ -1.7
COPS3-206ENST00000471414 OR10H5Q8NGA6 315 aa4.41□□□□□ -1.7
COPS3-206ENST00000471414 PROKR1Q8TCW9 393 aa4.41□□□□□ -1.7
COPS3-206ENST00000471414 RIN2Q8WYP3 895 aaPredicted RBP4.41□□□□□ -1.7
COPS3-206ENST00000471414 EPC1Q9H2F5 836 aa4.41□□□□□ -1.7
COPS3-206ENST00000471414 SLKQ9H2G2 1235 aaPredicted RBP4.41□□□□□ -1.7
COPS3-206ENST00000471414 BCO1Q9HAY6 547 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms