RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 KBTBD2Q8IY47 623 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 ANKLE1Q8NAG6 615 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 U2AF1L4Q8WU68 220 aaKnown RBP4.51□□□□□ -1.69
VPS50-210ENST00000471188 GRAMD1AQ96CP6 724 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 SLC7A6OSQ96CW6 309 aaPredicted RBP4.51□□□□□ -1.69
VPS50-210ENST00000471188 FAM161BQ96MY7 647 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 ARPC5LQ9BPX5 153 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 BEGAINQ9BUH8 593 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 PUS3Q9BZE2 481 aaKnown RBP4.51□□□□□ -1.69
VPS50-210ENST00000471188 SYNCQ9H7C4 482 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 SLCO1B3Q9NPD5 702 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 UBN1Q9NPG3 1134 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 USP40Q9NVE5 1235 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 ANGPTL2Q9UKU9 493 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 NR2E1Q9Y466 385 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 HEY1Q9Y5J3 304 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 IGSF1Q8N6C5 1336 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 PLEKHG1Q9ULL1 1385 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 GSTTP1A0A1W2PQM5 241 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 SIGLEC16A6NMB1 481 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 DDX3XO00571 662 aaKnown RBP eCLIP4.51□□□□□ -1.69
VPS50-210ENST00000471188 SPTLC1O15269 473 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 FOXP2O15409 715 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 SPAG7O75391 227 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 BCRP11274 1271 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 HARSP12081 509 aaKnown RBP4.51□□□□□ -1.69
VPS50-210ENST00000471188 ATP6V1B1P15313 513 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 HALP42357 657 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 SERPINB8P50452 374 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 TBL3Q12788 808 aaKnown RBP4.51□□□□□ -1.69
VPS50-210ENST00000471188 LLGL1Q15334 1064 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 ASIC2Q16515 512 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 TMEM266Q2M3C6 531 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 LRRC24Q50LG9 513 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 FAM83BQ5T0W9 1011 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 ZNF697Q5TEC3 545 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 DAB2IPQ5VWQ8 1189 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 LMBRD2Q68DH5 695 aaPredicted RBP4.51□□□□□ -1.69
VPS50-210ENST00000471188 RBM44Q6ZP01 1051 aaKnown RBP4.51□□□□□ -1.69
VPS50-210ENST00000471188 LIAT1Q6ZQX7 453 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 MFSD6Q6ZSS7 791 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 MTDHQ86UE4 582 aaKnown RBP4.51□□□□□ -1.69
VPS50-210ENST00000471188 TREML1Q86YW5 311 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 MARCH10Q8NA82 808 aaPredicted RBP4.51□□□□□ -1.69
VPS50-210ENST00000471188 FANCBQ8NB91 859 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 GIMAP8Q8ND71 665 aaPredicted RBP4.51□□□□□ -1.69
VPS50-210ENST00000471188 NGDNQ8NEJ9 315 aaKnown RBP4.51□□□□□ -1.69
VPS50-210ENST00000471188 SH3TC2Q8TF17 1288 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 NCSTNQ92542 709 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 MRRFQ96E11 262 aaKnown RBP4.51□□□□□ -1.69
VPS50-210ENST00000471188 STK33Q9BYT3 514 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.51□□□□□ -1.69
VPS50-210ENST00000471188 DISC1Q9NRI5 854 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 INIPQ9NRY2 104 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 NDE1Q9NXR1 346 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 IL1RAPL1Q9NZN1 696 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 PRKAG3Q9UGI9 489 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 AMFRQ9UKV5 643 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 PHTF1Q9UMS5 762 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 TRAF3IP3Q9Y228 551 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 SIK3Q9Y2K2 1263 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 TMA7Q9Y2S6 64 aaKnown RBP4.51□□□□□ -1.69
VPS50-210ENST00000471188 PTPRUQ92729 1446 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 MYH4Q9Y623 1939 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 NRKQ7Z2Y5 1582 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 PITPNM2Q9BZ72 1349 aa4.51□□□□□ -1.69
VPS50-210ENST00000471188 RIPK2O43353 540 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 CCDC22O60826 627 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 RNASEH1O60930 286 aaKnown RBP4.5□□□□□ -1.69
VPS50-210ENST00000471188 NDUFV2P19404 249 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 CETN2P41208 172 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 RFX5P48382 616 aaPredicted RBP4.5□□□□□ -1.69
VPS50-210ENST00000471188 CD97P48960 835 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 ATP2C1P98194 919 aaPredicted RBP4.5□□□□□ -1.69
VPS50-210ENST00000471188 CALCOCO2Q13137 446 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 SEPT7Q16181 437 aaKnown RBP4.5□□□□□ -1.69
VPS50-210ENST00000471188 HGSNATQ68CP4 663 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 B3GNT6Q6ZMB0 384 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 DTHD1Q6ZMT9 781 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 C14orf80Q86SX3 495 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 JAMLQ86YT9 394 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 CCDC125Q86Z20 511 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 BAP1Q92560 729 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 CASP10Q92851 521 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 TEKT1Q969V4 418 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 MKL1Q969V6 931 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 MAGEB18Q96M61 343 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 SRPK1Q96SB4 655 aaKnown RBP4.5□□□□□ -1.69
VPS50-210ENST00000471188 CADM1Q9BY67 442 aaKnown RBP4.5□□□□□ -1.69
VPS50-210ENST00000471188 NDEL1Q9GZM8 345 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 EPB41L4BQ9H329 900 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 NPHS2Q9NP85 383 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 KRT82Q9NSB4 513 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 EFR3BQ9Y2G0 817 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 ATP6V0A2Q9Y487 856 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 WDR19Q8NEZ3 1342 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 A0A0G2JND7 137 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 WDR91A4D1P6 747 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 EXOC3O60645 756 aa4.5□□□□□ -1.69
VPS50-210ENST00000471188 USP1O94782 785 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms