RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 PDXKO00764 312 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 CETN3O15182 167 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 ATP8B1O43520 1251 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 KRT86O43790 486 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 CALUO43852 315 aaPredicted RBP6.21□□□□□ -1.42
HDAC8-216ENST00000470998 EDIL3O43854 480 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 PRMT3O60678 531 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 DKC1O60832 514 aaKnown RBP eCLIP6.21□□□□□ -1.42
HDAC8-216ENST00000470998 NDUFA10O95299 355 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 EYA4O95677 639 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 KRT18P05783 430 aaKnown RBP6.21□□□□□ -1.42
HDAC8-216ENST00000470998 MAPTP10636 758 aaKnown RBP6.21□□□□□ -1.42
HDAC8-216ENST00000470998 RARBP10826 455 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 AKR1A1P14550 325 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 IDEP14735 1019 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 CYP11B2P19099 503 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 ZNF76P36508 570 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 MAGEA10P43363 369 aaPredicted RBP6.21□□□□□ -1.42
HDAC8-216ENST00000470998 HSD17B4P51659 736 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 SLC12A3P55017 1021 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 ADKP55263 362 aaKnown RBP6.21□□□□□ -1.42
HDAC8-216ENST00000470998 SNRPFP62306 86 aaKnown RBP6.21□□□□□ -1.42
HDAC8-216ENST00000470998 FAM193AP78312 1265 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 NCBP1Q09161 790 aaKnown RBP6.21□□□□□ -1.42
HDAC8-216ENST00000470998 WHAMMP3Q1A5X7 153 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 LRRC26Q2I0M4 334 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 TKFCQ3LXA3 575 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 CEP55Q53EZ4 464 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 PRR16Q569H4 304 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 ANKRD40Q6AI12 368 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 IQCEQ6IPM2 695 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 USP17L6PQ6QN14 398 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 MAMDC4Q6UXC1 1216 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 LRRC55Q6ZSA7 311 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 RNF180Q86T96 592 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 GPBP1Q86WP2 473 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 CREBRFQ8IUR6 639 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 TRPV1Q8NER1 839 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 RDM1Q8NG50 284 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 TMEM174Q8WUU8 243 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 UBXN4Q92575 508 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 SLC5A5Q92911 643 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 EIF3CQ99613 913 aaKnown RBP6.21□□□□□ -1.42
HDAC8-216ENST00000470998 LBHD1Q9BQE6 289 aaPredicted RBP6.21□□□□□ -1.42
HDAC8-216ENST00000470998 TINF2Q9BSI4 451 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 MKNK1Q9BUB5 465 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 C2orf49Q9BVC5 232 aaPredicted RBP6.21□□□□□ -1.42
HDAC8-216ENST00000470998 UBE2OQ9C0C9 1292 aaKnown RBP6.21□□□□□ -1.42
HDAC8-216ENST00000470998 VPS16Q9H269 839 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 NDST4Q9H3R1 872 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 SLC38A10Q9HBR0 1119 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 FBXO28Q9NVF7 368 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 FBXL5Q9UKA1 691 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 VAV3Q9UKW4 847 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 ZMIZ1Q9ULJ6 1067 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 PLAGL2Q9UPG8 496 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 TRAF3IP3Q9Y228 551 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 MRFAP1Q9Y605 127 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 SYNGAP1Q96PV0 1343 aa6.21□□□□□ -1.42
HDAC8-216ENST00000470998 CENPFP49454 3210 aa6.2□□□□□ -1.42
HDAC8-216ENST00000470998 A0A0G2JMZ2 1700 aa6.2□□□□□ -1.42
HDAC8-216ENST00000470998 DNAJC25-GNG10A0A024R161 153 aa6.2□□□□□ -1.42
HDAC8-216ENST00000470998 IGLV3-22A0A075B6J6 115 aa6.2□□□□□ -1.42
HDAC8-216ENST00000470998 A0A0U1RQG5 324 aaPredicted RBP6.2□□□□□ -1.42
HDAC8-216ENST00000470998 TTC26A0AVF1 554 aa6.2□□□□□ -1.42
HDAC8-216ENST00000470998 CTAGE9A4FU28 777 aa6.2□□□□□ -1.42
HDAC8-216ENST00000470998 TRIM49BA6NDI0 452 aa6.2□□□□□ -1.42
HDAC8-216ENST00000470998 B4DLN1 442 aa6.2□□□□□ -1.42
HDAC8-216ENST00000470998 PES1O00541 588 aaKnown RBP6.2□□□□□ -1.42
HDAC8-216ENST00000470998 MSH4O15457 936 aa6.2□□□□□ -1.42
HDAC8-216ENST00000470998 MAFGO15525 162 aa6.2□□□□□ -1.42
HDAC8-216ENST00000470998 USO1O60763 962 aaKnown RBP6.2□□□□□ -1.42
HDAC8-216ENST00000470998 GAS7O60861 476 aa6.2□□□□□ -1.42
HDAC8-216ENST00000470998 PSMD10O75832 226 aa6.2□□□□□ -1.42
HDAC8-216ENST00000470998 STAM2O75886 525 aa6.2□□□□□ -1.42
HDAC8-216ENST00000470998 LYPLA2O95372 231 aa6.2□□□□□ -1.42
HDAC8-216ENST00000470998 LCA5LO95447 670 aa6.2□□□□□ -1.42
HDAC8-216ENST00000470998 GUCY2CP25092 1073 aa6.2□□□□□ -1.42
HDAC8-216ENST00000470998 MCM3P25205 808 aa6.2□□□□□ -1.42
HDAC8-216ENST00000470998 ZNF131P52739 623 aa6.2□□□□□ -1.42
HDAC8-216ENST00000470998 PMS1P54277 932 aaKnown RBP6.2□□□□□ -1.42
HDAC8-216ENST00000470998 CKAP4Q07065 602 aaKnown RBP6.2□□□□□ -1.42
HDAC8-216ENST00000470998 SNX17Q15036 470 aa6.2□□□□□ -1.42
HDAC8-216ENST00000470998 LRRC41Q15345 812 aa6.2□□□□□ -1.42
HDAC8-216ENST00000470998 EPHA7Q15375 998 aa6.2□□□□□ -1.42
HDAC8-216ENST00000470998 SPA17Q15506 151 aa6.2□□□□□ -1.42
HDAC8-216ENST00000470998 USH1GQ495M9 461 aa6.2□□□□□ -1.42
HDAC8-216ENST00000470998 CCDC40Q4G0X9 1142 aa6.2□□□□□ -1.42
HDAC8-216ENST00000470998 HSP90AA4PQ58FG1 418 aa6.2□□□□□ -1.42
HDAC8-216ENST00000470998 HERC4Q5GLZ8 1057 aaPredicted RBP6.2□□□□□ -1.42
HDAC8-216ENST00000470998 LRCH2Q5VUJ6 765 aa6.2□□□□□ -1.42
HDAC8-216ENST00000470998 SNRNP48Q6IEG0 339 aaKnown RBP6.2□□□□□ -1.42
HDAC8-216ENST00000470998 SLC39A5Q6ZMH5 540 aa6.2□□□□□ -1.42
HDAC8-216ENST00000470998 TOGARAM2Q6ZUX3 1019 aa6.2□□□□□ -1.42
HDAC8-216ENST00000470998 FRMD5Q7Z6J6 570 aa6.2□□□□□ -1.42
HDAC8-216ENST00000470998 TRIM58Q8NG06 486 aa6.2□□□□□ -1.42
HDAC8-216ENST00000470998 LRRC15Q8TF66 581 aa6.2□□□□□ -1.42
HDAC8-216ENST00000470998 RUBCNQ92622 972 aa6.2□□□□□ -1.42
HDAC8-216ENST00000470998 GOLGA1Q92805 767 aa6.2□□□□□ -1.42
HDAC8-216ENST00000470998 CDHR1Q96JP9 859 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms