RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.63□□□□□ -0.71
CCM2-204ENST00000470837 STYXL1Q9Y6J8 313 aa10.63□□□□□ -0.71
CCM2-204ENST00000470837 OGTO15294 1046 aa10.62□□□□□ -0.71
CCM2-204ENST00000470837 B4GALT5O43286 388 aa10.62□□□□□ -0.71
CCM2-204ENST00000470837 B4GALT4O60513 344 aa10.62□□□□□ -0.71
CCM2-204ENST00000470837 TSPAN1O60635 241 aa10.62□□□□□ -0.71
CCM2-204ENST00000470837 PQBP1O60828 265 aaKnown RBP10.62□□□□□ -0.71
CCM2-204ENST00000470837 ZSCAN20P17040 1043 aaPredicted RBP10.62□□□□□ -0.71
CCM2-204ENST00000470837 ARF4P18085 180 aaPredicted RBP10.62□□□□□ -0.71
CCM2-204ENST00000470837 KCNH2Q12809 1159 aa10.62□□□□□ -0.71
CCM2-204ENST00000470837 NFX1Q12986 1120 aaKnown RBP10.62□□□□□ -0.71
CCM2-204ENST00000470837 PAK2Q13177 524 aa10.62□□□□□ -0.71
CCM2-204ENST00000470837 TRIM14Q14142 442 aa10.62□□□□□ -0.71
CCM2-204ENST00000470837 NR1I3Q14994 352 aa10.62□□□□□ -0.71
CCM2-204ENST00000470837 SPECC1LQ69YQ0 1117 aa10.62□□□□□ -0.71
CCM2-204ENST00000470837 SLC39A4Q6P5W5 647 aa10.62□□□□□ -0.71
CCM2-204ENST00000470837 SLC27A1Q6PCB7 646 aa10.62□□□□□ -0.71
CCM2-204ENST00000470837 TMC6Q7Z403 805 aa10.62□□□□□ -0.71
CCM2-204ENST00000470837 THNSL1Q8IYQ7 743 aa10.62□□□□□ -0.71
CCM2-204ENST00000470837 HACE1Q8IYU2 909 aa10.62□□□□□ -0.71
CCM2-204ENST00000470837 USP38Q8NB14 1042 aa10.62□□□□□ -0.71
CCM2-204ENST00000470837 SPC24Q8NBT2 197 aa10.62□□□□□ -0.71
CCM2-204ENST00000470837 CCDC127Q96BQ5 260 aa10.62□□□□□ -0.71
CCM2-204ENST00000470837 IQCDQ96DY2 449 aa10.62□□□□□ -0.71
CCM2-204ENST00000470837 CCDC51Q96ER9 411 aa10.62□□□□□ -0.71
CCM2-204ENST00000470837 CPB2Q96IY4 423 aa10.62□□□□□ -0.71
CCM2-204ENST00000470837 NAP1L5Q96NT1 182 aaPredicted RBP10.62□□□□□ -0.71
CCM2-204ENST00000470837 CCDC94Q9BW85 323 aaPredicted RBP10.62□□□□□ -0.71
CCM2-204ENST00000470837 C11orf49Q9H6J7 331 aa10.62□□□□□ -0.71
CCM2-204ENST00000470837 RPF1Q9H9Y2 349 aaKnown RBP10.62□□□□□ -0.71
CCM2-204ENST00000470837 RBAKQ9NYW8 714 aaPredicted RBP10.62□□□□□ -0.71
CCM2-204ENST00000470837 IMPACTQ9P2X3 320 aa10.62□□□□□ -0.71
CCM2-204ENST00000470837 ARID2Q68CP9 1835 aa10.62□□□□□ -0.71
CCM2-204ENST00000470837 A0A1B0GUA9 196 aa10.61□□□□□ -0.71
CCM2-204ENST00000470837 AP5Z1O43299 807 aa10.61□□□□□ -0.71
CCM2-204ENST00000470837 CLSTN1O94985 981 aa10.61□□□□□ -0.71
CCM2-204ENST00000470837 CLTAP09496 248 aa10.61□□□□□ -0.71
CCM2-204ENST00000470837 DLATP10515 647 aaKnown RBP10.61□□□□□ -0.71
CCM2-204ENST00000470837 TRIM21P19474 475 aaKnown RBP10.61□□□□□ -0.71
CCM2-204ENST00000470837 FGFR4P22455 802 aa10.61□□□□□ -0.71
CCM2-204ENST00000470837 ACOT2P49753 483 aa10.61□□□□□ -0.71
CCM2-204ENST00000470837 ATN1P54259 1190 aaPredicted RBP10.61□□□□□ -0.71
CCM2-204ENST00000470837 YARSP54577 528 aaKnown RBP10.61□□□□□ -0.71
CCM2-204ENST00000470837 GSDMDP57764 484 aa10.61□□□□□ -0.71
CCM2-204ENST00000470837 ENPEPQ07075 957 aa10.61□□□□□ -0.71
CCM2-204ENST00000470837 CYP24A1Q07973 514 aa10.61□□□□□ -0.71
CCM2-204ENST00000470837 TSR1Q2NL82 804 aaKnown RBP10.61□□□□□ -0.71
CCM2-204ENST00000470837 TWF2Q6IBS0 349 aaKnown RBP10.61□□□□□ -0.71
CCM2-204ENST00000470837 CBWD2Q8IUF1 395 aa10.61□□□□□ -0.71
CCM2-204ENST00000470837 VSTM4Q8IW00 320 aa10.61□□□□□ -0.71
CCM2-204ENST00000470837 ZNF397Q8NF99 534 aaPredicted RBP10.61□□□□□ -0.71
CCM2-204ENST00000470837 TMC2Q8TDI7 906 aa10.61□□□□□ -0.71
CCM2-204ENST00000470837 FAM212AQ96EL1 285 aa10.61□□□□□ -0.71
CCM2-204ENST00000470837 ZBTB45Q96K62 511 aaPredicted RBP10.61□□□□□ -0.71
CCM2-204ENST00000470837 FBXL18Q96ME1 805 aa10.61□□□□□ -0.71
CCM2-204ENST00000470837 NUP58Q9BVL2 599 aa10.61□□□□□ -0.71
CCM2-204ENST00000470837 PDZD7Q9H5P4 517 aa10.61□□□□□ -0.71
CCM2-204ENST00000470837 MMRN2Q9H8L6 949 aa10.61□□□□□ -0.71
CCM2-204ENST00000470837 CDHR5Q9HBB8 845 aa10.61□□□□□ -0.71
CCM2-204ENST00000470837 AGPAT5Q9NUQ2 364 aa10.61□□□□□ -0.71
CCM2-204ENST00000470837 USP20Q9Y2K6 914 aa10.61□□□□□ -0.71
CCM2-204ENST00000470837 R3HCC1Q9Y3T6 440 aaKnown RBP10.61□□□□□ -0.71
CCM2-204ENST00000470837 A0A1W2PQC6 194 aa10.6□□□□□ -0.71
CCM2-204ENST00000470837 IL18RAPO95256 599 aa10.6□□□□□ -0.71
CCM2-204ENST00000470837 NPTXRO95502 500 aa10.6□□□□□ -0.71
CCM2-204ENST00000470837 CHRNA1P02708 482 aa10.6□□□□□ -0.71
CCM2-204ENST00000470837 IQCF3P0C7M6 154 aa10.6□□□□□ -0.71
CCM2-204ENST00000470837 CKBP12277 381 aa10.6□□□□□ -0.71
CCM2-204ENST00000470837 TNNI1P19237 187 aa10.6□□□□□ -0.71
CCM2-204ENST00000470837 PROZP22891 400 aa10.6□□□□□ -0.71
CCM2-204ENST00000470837 GTF2H1P32780 548 aa10.6□□□□□ -0.71
CCM2-204ENST00000470837 CDK7P50613 346 aa10.6□□□□□ -0.71
CCM2-204ENST00000470837 AP3M2P53677 418 aa10.6□□□□□ -0.71
CCM2-204ENST00000470837 MYL7Q01449 175 aa10.6□□□□□ -0.71
CCM2-204ENST00000470837 POU5F1Q01860 360 aaKnown RBP10.6□□□□□ -0.71
CCM2-204ENST00000470837 PSMD6Q15008 389 aa10.6□□□□□ -0.71
CCM2-204ENST00000470837 AMHR2Q16671 573 aa10.6□□□□□ -0.71
CCM2-204ENST00000470837 SLC39A5Q6ZMH5 540 aa10.6□□□□□ -0.71
CCM2-204ENST00000470837 GBP6Q6ZN66 633 aa10.6□□□□□ -0.71
CCM2-204ENST00000470837 APTXQ7Z2E3 356 aaKnown RBP10.6□□□□□ -0.71
CCM2-204ENST00000470837 NECAB2Q7Z6G3 386 aa10.6□□□□□ -0.71
CCM2-204ENST00000470837 FAM126BQ8IXS8 530 aa10.6□□□□□ -0.71
CCM2-204ENST00000470837 CCDC150Q8NCX0 1101 aa10.6□□□□□ -0.71
CCM2-204ENST00000470837 NEK11Q8NG66 645 aa10.6□□□□□ -0.71
CCM2-204ENST00000470837 SLC35C1Q96A29 364 aa10.6□□□□□ -0.71
CCM2-204ENST00000470837 ACAP3Q96P50 834 aa10.6□□□□□ -0.71
CCM2-204ENST00000470837 PPP1R9BQ96SB3 815 aa10.6□□□□□ -0.71
CCM2-204ENST00000470837 MCOLN1Q9GZU1 580 aa10.6□□□□□ -0.71
CCM2-204ENST00000470837 CDT1Q9H211 546 aa10.6□□□□□ -0.71
CCM2-204ENST00000470837 CHST12Q9NRB3 414 aa10.6□□□□□ -0.71
CCM2-204ENST00000470837 TOPORSQ9NS56 1045 aaPredicted RBP10.6□□□□□ -0.71
CCM2-204ENST00000470837 NOC2LQ9Y3T9 749 aaKnown RBP10.6□□□□□ -0.71
CCM2-204ENST00000470837 SQORQ9Y6N5 450 aa10.6□□□□□ -0.71
CCM2-204ENST00000470837 PCNTO95613 3336 aa10.6□□□□□ -0.71
CCM2-204ENST00000470837 ITIH6Q6UXX5 1313 aa10.59□□□□□ -0.71
CCM2-204ENST00000470837 GTPBP10A4D1E9 387 aaKnown RBP10.59□□□□□ -0.71
CCM2-204ENST00000470837 TTLL13PA6NNM8 815 aa10.59□□□□□ -0.71
CCM2-204ENST00000470837 P4HA2O15460 535 aa10.59□□□□□ -0.71
CCM2-204ENST00000470837 TEX33O43247 280 aa10.59□□□□□ -0.71
CCM2-204ENST00000470837 PHACTR2O75167 634 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms