RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 NFYCQ13952 458 aa3.59□□□□□ -1.83
UBXN4-206ENST00000470687 PCBP2Q15366 365 aaKnown RBP eCLIP3.59□□□□□ -1.83
UBXN4-206ENST00000470687 CT83Q5H943 113 aa3.59□□□□□ -1.83
UBXN4-206ENST00000470687 GPR158Q5T848 1215 aa3.59□□□□□ -1.83
UBXN4-206ENST00000470687 AHI1Q8N157 1196 aa3.59□□□□□ -1.83
UBXN4-206ENST00000470687 LILRA3Q8N6C8 439 aaPredicted RBP3.59□□□□□ -1.83
UBXN4-206ENST00000470687 PPP1R14CQ8TAE6 165 aa3.59□□□□□ -1.83
UBXN4-206ENST00000470687 WDR66Q8TBY9 1149 aa3.59□□□□□ -1.83
UBXN4-206ENST00000470687 TSPEARQ8WU66 669 aa3.59□□□□□ -1.83
UBXN4-206ENST00000470687 CFHR4Q92496 578 aa3.59□□□□□ -1.83
UBXN4-206ENST00000470687 NKD2Q969F2 451 aaPredicted RBP3.59□□□□□ -1.83
UBXN4-206ENST00000470687 MAML3Q96JK9 1138 aa3.59□□□□□ -1.83
UBXN4-206ENST00000470687 MYL10Q9BUA6 226 aa3.59□□□□□ -1.83
UBXN4-206ENST00000470687 PITHD1Q9GZP4 211 aaPredicted RBP3.59□□□□□ -1.83
UBXN4-206ENST00000470687 C12orf65Q9H3J6 166 aaKnown RBP3.59□□□□□ -1.83
UBXN4-206ENST00000470687 SLC2A4RGQ9NR83 387 aa3.59□□□□□ -1.83
UBXN4-206ENST00000470687 DDX56Q9NY93 547 aaKnown RBP3.59□□□□□ -1.83
UBXN4-206ENST00000470687 SCOCQ9UIL1 159 aa3.59□□□□□ -1.83
UBXN4-206ENST00000470687 ANKRD30AQ9BXX3 1397 aa3.59□□□□□ -1.83
UBXN4-206ENST00000470687 NCOA3Q9Y6Q9 1424 aa3.59□□□□□ -1.84
UBXN4-206ENST00000470687 LRRC9Q6ZRR7 1453 aa3.59□□□□□ -1.84
UBXN4-206ENST00000470687 SHANK2Q9UPX8 1470 aa3.59□□□□□ -1.84
UBXN4-206ENST00000470687 CEP170BQ9Y4F5 1589 aaPredicted RBP3.59□□□□□ -1.84
UBXN4-206ENST00000470687 DEPDC5O75140 1603 aa3.59□□□□□ -1.84
UBXN4-206ENST00000470687 PRPF3O43395 683 aaKnown RBP3.58□□□□□ -1.84
UBXN4-206ENST00000470687 PRPF6O94906 941 aaKnown RBP3.58□□□□□ -1.84
UBXN4-206ENST00000470687 GJA4P35212 333 aa3.58□□□□□ -1.84
UBXN4-206ENST00000470687 SOX5P35711 763 aa3.58□□□□□ -1.84
UBXN4-206ENST00000470687 ECE1P42892 770 aa3.58□□□□□ -1.84
UBXN4-206ENST00000470687 SCNN1BP51168 640 aa3.58□□□□□ -1.84
UBXN4-206ENST00000470687 KRTAP10-11P60412 298 aa3.58□□□□□ -1.84
UBXN4-206ENST00000470687 PLEKHG6Q3KR16 790 aa3.58□□□□□ -1.84
UBXN4-206ENST00000470687 ATP13A4Q4VNC1 1196 aa3.58□□□□□ -1.84
UBXN4-206ENST00000470687 TAF7LQ5H9L4 462 aa3.58□□□□□ -1.84
UBXN4-206ENST00000470687 TMEM200BQ69YZ2 307 aa3.58□□□□□ -1.84
UBXN4-206ENST00000470687 TRIM68Q6AZZ1 485 aa3.58□□□□□ -1.84
UBXN4-206ENST00000470687 GAREM2Q75VX8 874 aa3.58□□□□□ -1.84
UBXN4-206ENST00000470687 RASSF3Q86WH2 238 aa3.58□□□□□ -1.84
UBXN4-206ENST00000470687 CXorf67Q86X51 503 aaPredicted RBP3.58□□□□□ -1.84
UBXN4-206ENST00000470687 TMPRSS6Q8IU80 811 aa3.58□□□□□ -1.84
UBXN4-206ENST00000470687 ANKRD13AQ8IZ07 590 aa3.58□□□□□ -1.84
UBXN4-206ENST00000470687 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.58□□□□□ -1.84
UBXN4-206ENST00000470687 OR2W6PQ8NHA6 318 aa3.58□□□□□ -1.84
UBXN4-206ENST00000470687 SCYL1Q96KG9 808 aa3.58□□□□□ -1.84
UBXN4-206ENST00000470687 FOXB1Q99853 325 aa3.58□□□□□ -1.84
UBXN4-206ENST00000470687 MSL2Q9HCI7 577 aa3.58□□□□□ -1.84
UBXN4-206ENST00000470687 INCENPQ9NQS7 918 aa3.58□□□□□ -1.84
UBXN4-206ENST00000470687 TOMM22Q9NS69 142 aa3.58□□□□□ -1.84
UBXN4-206ENST00000470687 C14orf119Q9NWQ9 140 aa3.58□□□□□ -1.84
UBXN4-206ENST00000470687 PARPBPQ9NWS1 579 aa3.58□□□□□ -1.84
UBXN4-206ENST00000470687 EVLQ9UI08 416 aaPredicted RBP3.58□□□□□ -1.84
UBXN4-206ENST00000470687 TUBD1Q9UJT1 453 aa3.58□□□□□ -1.84
UBXN4-206ENST00000470687 TRHDEQ9UKU6 1024 aa3.58□□□□□ -1.84
UBXN4-206ENST00000470687 DENND2AQ9ULE3 1009 aa3.58□□□□□ -1.84
UBXN4-206ENST00000470687 NOP58Q9Y2X3 529 aaKnown RBP3.58□□□□□ -1.84
UBXN4-206ENST00000470687 ZNF335Q9H4Z2 1342 aaPredicted RBP3.58□□□□□ -1.84
UBXN4-206ENST00000470687 NPHP4O75161 1426 aaPredicted RBP3.58□□□□□ -1.84
UBXN4-206ENST00000470687 ERBINQ96RT1 1412 aa3.58□□□□□ -1.84
UBXN4-206ENST00000470687 DUOX2Q9NRD8 1548 aa3.58□□□□□ -1.84
UBXN4-206ENST00000470687 UGGT1Q9NYU2 1555 aa3.58□□□□□ -1.84
UBXN4-206ENST00000470687 MAST1Q9Y2H9 1570 aa3.58□□□□□ -1.84
UBXN4-206ENST00000470687 DNMT1P26358 1616 aaKnown RBP3.58□□□□□ -1.84
UBXN4-206ENST00000470687 EIF2AK4Q9P2K8 1649 aaKnown RBP3.58□□□□□ -1.84
UBXN4-206ENST00000470687 ZC3H13Q5T200 1668 aaKnown RBP3.58□□□□□ -1.84
UBXN4-206ENST00000470687 KRTAP23-1A1A580 65 aa3.57□□□□□ -1.84
UBXN4-206ENST00000470687 H7C1D1 291 aa3.57□□□□□ -1.84
UBXN4-206ENST00000470687 GSTA4O15217 222 aa3.57□□□□□ -1.84
UBXN4-206ENST00000470687 ARHGAP6O43182 974 aa3.57□□□□□ -1.84
UBXN4-206ENST00000470687 MAFO75444 373 aaPredicted RBP3.57□□□□□ -1.84
UBXN4-206ENST00000470687 PEX11BO96011 259 aa3.57□□□□□ -1.84
UBXN4-206ENST00000470687 CFBP00751 764 aa3.57□□□□□ -1.84
UBXN4-206ENST00000470687 LPLP06858 475 aa3.57□□□□□ -1.84
UBXN4-206ENST00000470687 IBSPP21815 317 aaPredicted RBP3.57□□□□□ -1.84
UBXN4-206ENST00000470687 EDNRBP24530 442 aa3.57□□□□□ -1.84
UBXN4-206ENST00000470687 KDM5AP29375 1690 aaKnown RBP3.57□□□□□ -1.84
UBXN4-206ENST00000470687 ETV4P43268 484 aa3.57□□□□□ -1.84
UBXN4-206ENST00000470687 MTNR1BP49286 362 aa3.57□□□□□ -1.84
UBXN4-206ENST00000470687 KPNA1P52294 538 aaPredicted RBP3.57□□□□□ -1.84
UBXN4-206ENST00000470687 KRTAP10-9P60411 292 aa3.57□□□□□ -1.84
UBXN4-206ENST00000470687 IL2P60568 153 aa3.57□□□□□ -1.84
UBXN4-206ENST00000470687 MRPS21P82921 87 aaKnown RBP3.57□□□□□ -1.84
UBXN4-206ENST00000470687 CLTCQ00610 1675 aaKnown RBP3.57□□□□□ -1.84
UBXN4-206ENST00000470687 SLC6A3Q01959 620 aa3.57□□□□□ -1.84
UBXN4-206ENST00000470687 MCL1Q07820 350 aa3.57□□□□□ -1.84
UBXN4-206ENST00000470687 CAMSAP2Q08AD1 1489 aa3.57□□□□□ -1.84
UBXN4-206ENST00000470687 TIAM1Q13009 1591 aa3.57□□□□□ -1.84
UBXN4-206ENST00000470687 LRRC41Q15345 812 aa3.57□□□□□ -1.84
UBXN4-206ENST00000470687 RPRD2Q5VT52 1461 aaKnown RBP3.57□□□□□ -1.84
UBXN4-206ENST00000470687 GLCCI1Q86VQ1 547 aa3.57□□□□□ -1.84
UBXN4-206ENST00000470687 PIK3C3Q8NEB9 887 aa3.57□□□□□ -1.84
UBXN4-206ENST00000470687 OR2I1PQ8NGU4 316 aa3.57□□□□□ -1.84
UBXN4-206ENST00000470687 TGFBRAP1Q8WUH2 860 aa3.57□□□□□ -1.84
UBXN4-206ENST00000470687 ERCC4Q92889 916 aaPredicted RBP3.57□□□□□ -1.84
UBXN4-206ENST00000470687 TTC1Q99614 292 aa3.57□□□□□ -1.84
UBXN4-206ENST00000470687 RTFDC1Q9BY42 306 aaPredicted RBP3.57□□□□□ -1.84
UBXN4-206ENST00000470687 ANO3Q9BYT9 981 aa3.57□□□□□ -1.84
UBXN4-206ENST00000470687 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.57□□□□□ -1.84
UBXN4-206ENST00000470687 CABP5Q9NP86 173 aa3.57□□□□□ -1.84
UBXN4-206ENST00000470687 ACSS2Q9NR19 701 aa3.57□□□□□ -1.84
UBXN4-206ENST00000470687 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms