RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 CNTNAP2Q9UHC6 1331 aa9.06□□□□□ -0.96
GTF3A-206ENST00000470606 CITO14578 2027 aa9.06□□□□□ -0.96
GTF3A-206ENST00000470606 GTPBP10A4D1E9 387 aaKnown RBP9.06□□□□□ -0.96
GTF3A-206ENST00000470606 RRN3P2A6NIE6 340 aa9.06□□□□□ -0.96
GTF3A-206ENST00000470606 LRRC53A6NM62 1247 aa9.06□□□□□ -0.96
GTF3A-206ENST00000470606 ASAP2O43150 1006 aa9.06□□□□□ -0.96
GTF3A-206ENST00000470606 EXTL3O43909 919 aa9.06□□□□□ -0.96
GTF3A-206ENST00000470606 FKTNO75072 461 aa9.06□□□□□ -0.96
GTF3A-206ENST00000470606 TOM1L1O75674 476 aa9.06□□□□□ -0.96
GTF3A-206ENST00000470606 RARBP10826 455 aa9.06□□□□□ -0.96
GTF3A-206ENST00000470606 UCHL3P15374 230 aa9.06□□□□□ -0.96
GTF3A-206ENST00000470606 ARF4P18085 180 aaPredicted RBP9.06□□□□□ -0.96
GTF3A-206ENST00000470606 HNRNPH3P31942 346 aaKnown RBP9.06□□□□□ -0.96
GTF3A-206ENST00000470606 POLR2FP61218 127 aaKnown RBP9.06□□□□□ -0.96
GTF3A-206ENST00000470606 ZBED6P86452 979 aa9.06□□□□□ -0.96
GTF3A-206ENST00000470606 PPP2R3AQ06190 1150 aa9.06□□□□□ -0.96
GTF3A-206ENST00000470606 KCNA10Q16322 511 aa9.06□□□□□ -0.96
GTF3A-206ENST00000470606 EXOC3L4Q17RC7 722 aa9.06□□□□□ -0.96
GTF3A-206ENST00000470606 NBPF20Q3BBV1 942 aa9.06□□□□□ -0.96
GTF3A-206ENST00000470606 EPC2Q52LR7 807 aa9.06□□□□□ -0.96
GTF3A-206ENST00000470606 KLHDC7AQ5VTJ3 777 aa9.06□□□□□ -0.96
GTF3A-206ENST00000470606 LMBRD2Q68DH5 695 aaPredicted RBP9.06□□□□□ -0.96
GTF3A-206ENST00000470606 LHX8Q68G74 356 aa9.06□□□□□ -0.96
GTF3A-206ENST00000470606 ZPBP2Q6X784 338 aa9.06□□□□□ -0.96
GTF3A-206ENST00000470606 TSHZ1Q6ZSZ6 1077 aa9.06□□□□□ -0.96
GTF3A-206ENST00000470606 ZBTB33Q86T24 672 aa9.06□□□□□ -0.96
GTF3A-206ENST00000470606 CCAR2Q8N163 923 aaKnown RBP9.06□□□□□ -0.96
GTF3A-206ENST00000470606 OR8K1Q8NGG5 319 aa9.06□□□□□ -0.96
GTF3A-206ENST00000470606 PXYLP1Q8TE99 480 aa9.06□□□□□ -0.96
GTF3A-206ENST00000470606 DNAJB3Q8WWF6 145 aa9.06□□□□□ -0.96
GTF3A-206ENST00000470606 CPB2Q96IY4 423 aa9.06□□□□□ -0.96
GTF3A-206ENST00000470606 PCMTD1Q96MG8 357 aaPredicted RBP9.06□□□□□ -0.96
GTF3A-206ENST00000470606 DESI2Q9BSY9 194 aa9.06□□□□□ -0.96
GTF3A-206ENST00000470606 NUP58Q9BVL2 599 aa9.06□□□□□ -0.96
GTF3A-206ENST00000470606 NAA15Q9BXJ9 866 aaKnown RBP9.06□□□□□ -0.96
GTF3A-206ENST00000470606 OSBPL7Q9BZF2 842 aa9.06□□□□□ -0.96
GTF3A-206ENST00000470606 PDE11AQ9HCR9 933 aa9.06□□□□□ -0.96
GTF3A-206ENST00000470606 PLCB1Q9NQ66 1216 aa9.06□□□□□ -0.96
GTF3A-206ENST00000470606 TRMT1Q9NXH9 659 aaKnown RBP9.06□□□□□ -0.96
GTF3A-206ENST00000470606 PCDH10Q9P2E7 1040 aa9.06□□□□□ -0.96
GTF3A-206ENST00000470606 PLAGL2Q9UPG8 496 aa9.06□□□□□ -0.96
GTF3A-206ENST00000470606 PTCH2Q9Y6C5 1203 aa9.06□□□□□ -0.96
GTF3A-206ENST00000470606 KIAA0100Q14667 2235 aaKnown RBP9.06□□□□□ -0.96
GTF3A-206ENST00000470606 SMIM35A0A1B0GVV1 85 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 ABL1P00519 1130 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 INHAP05111 366 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 ASGR1P07306 291 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 PNMA6AP0CW24 399 aaPredicted RBP9.05□□□□□ -0.96
GTF3A-206ENST00000470606 CYP2C9P11712 490 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 HARSP12081 509 aaKnown RBP9.05□□□□□ -0.96
GTF3A-206ENST00000470606 SCP2P22307 547 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 HOXA11P31270 313 aaPredicted RBP9.05□□□□□ -0.96
GTF3A-206ENST00000470606 CLDN10P78369 228 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 MCL1Q07820 350 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 PRPF4BQ13523 1007 aaKnown RBP9.05□□□□□ -0.96
GTF3A-206ENST00000470606 TFDP1Q14186 410 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 FAM187BQ17R55 369 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 HGSNATQ68CP4 663 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 GDF6Q6KF10 455 aaPredicted RBP9.05□□□□□ -0.96
GTF3A-206ENST00000470606 PHLDB3Q6NSJ2 640 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 GBP6Q6ZN66 633 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 C15orf39Q6ZRI6 1047 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 RRAGAQ7L523 313 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 ZBTB8OSQ8IWT0 167 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 RAET1EQ8TD07 263 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 CCDC51Q96ER9 411 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 MSTO1Q9BUK6 570 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 MRPL4Q9BYD3 311 aaKnown RBP9.05□□□□□ -0.96
GTF3A-206ENST00000470606 GPR88Q9GZN0 384 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 CXCL16Q9H2A7 254 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.05□□□□□ -0.96
GTF3A-206ENST00000470606 SAGE1Q9NXZ1 904 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 CEP72Q9P209 647 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 ARHGAP20Q9P2F6 1191 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 GINS2Q9Y248 185 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 REXO2Q9Y3B8 237 aaKnown RBP9.05□□□□□ -0.96
GTF3A-206ENST00000470606 ZNF263O14978 683 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 CLDN3O15551 220 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 ARHGAP6O43182 974 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 TSPAN1O60635 241 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 MYCNP04198 464 aaPredicted RBP9.05□□□□□ -0.96
GTF3A-206ENST00000470606 DLATP10515 647 aaKnown RBP9.05□□□□□ -0.96
GTF3A-206ENST00000470606 KRT13P13646 458 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 TMOD1P28289 359 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 CST5P28325 142 aaPredicted RBP9.05□□□□□ -0.96
GTF3A-206ENST00000470606 HOXD10P28358 340 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 ABCD1P33897 745 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 KCNJ6P48051 423 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 MYL7Q01449 175 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 MAP2K1Q02750 393 aaPredicted RBP9.05□□□□□ -0.96
GTF3A-206ENST00000470606 ATF7IP2Q5U623 682 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 SLFN12LQ6IEE8 588 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 IQCEQ6IPM2 695 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 PDXDC1Q6P996 788 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 SV2AQ7L0J3 742 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 REXO1L1PQ8IX06 675 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 CCDC112Q8NEF3 446 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 NEK11Q8NG66 645 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 OR5B17Q8NGF7 314 aa9.05□□□□□ -0.96
GTF3A-206ENST00000470606 OLIG1Q8TAK6 271 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms