RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 CHST12Q9NRB3 414 aa12.3□□□□□ -0.44
SREBF1-209ENST00000470247 GOLGA8IPA6NC78 632 aa12.29□□□□□ -0.44
SREBF1-209ENST00000470247 GOLGA8JA6NMD2 632 aa12.29□□□□□ -0.44
SREBF1-209ENST00000470247 PARNO95453 639 aaKnown RBP12.29□□□□□ -0.44
SREBF1-209ENST00000470247 ADRB2P07550 413 aa12.29□□□□□ -0.44
SREBF1-209ENST00000470247 MCF2P10911 925 aa12.29□□□□□ -0.44
SREBF1-209ENST00000470247 CYP2J2P51589 502 aa12.29□□□□□ -0.44
SREBF1-209ENST00000470247 PAK2Q13177 524 aa12.29□□□□□ -0.44
SREBF1-209ENST00000470247 MFSD5Q6N075 450 aa12.29□□□□□ -0.44
SREBF1-209ENST00000470247 NOTUMQ6P988 496 aa12.29□□□□□ -0.44
SREBF1-209ENST00000470247 CBWD2Q8IUF1 395 aa12.29□□□□□ -0.44
SREBF1-209ENST00000470247 TMEM192Q8IY95 271 aa12.29□□□□□ -0.44
SREBF1-209ENST00000470247 CEP120Q8N960 986 aa12.29□□□□□ -0.44
SREBF1-209ENST00000470247 XXYLT1Q8NBI6 393 aa12.29□□□□□ -0.44
SREBF1-209ENST00000470247 SAAL1Q96ER3 474 aa12.29□□□□□ -0.44
SREBF1-209ENST00000470247 CCDC51Q96ER9 411 aa12.29□□□□□ -0.44
SREBF1-209ENST00000470247 CEP63Q96MT8 703 aa12.29□□□□□ -0.44
SREBF1-209ENST00000470247 TRAIPQ9BWF2 469 aa12.29□□□□□ -0.44
SREBF1-209ENST00000470247 IFIH1Q9BYX4 1025 aaKnown RBP12.29□□□□□ -0.44
SREBF1-209ENST00000470247 THAP9Q9H5L6 903 aa12.29□□□□□ -0.44
SREBF1-209ENST00000470247 ANKFY1Q9P2R3 1169 aa12.29□□□□□ -0.44
SREBF1-209ENST00000470247 AGO2Q9UKV8 859 aaKnown RBP12.29□□□□□ -0.44
SREBF1-209ENST00000470247 PIN4Q9Y237 131 aaKnown RBP12.29□□□□□ -0.44
SREBF1-209ENST00000470247 FSD2A1L4K1 749 aa12.28□□□□□ -0.44
SREBF1-209ENST00000470247 SMTNL1A8MU46 457 aa12.28□□□□□ -0.44
SREBF1-209ENST00000470247 KIAA0391O15091 583 aaKnown RBP12.28□□□□□ -0.44
SREBF1-209ENST00000470247 CETN3O15182 167 aa12.28□□□□□ -0.44
SREBF1-209ENST00000470247 OGTO15294 1046 aa12.28□□□□□ -0.44
SREBF1-209ENST00000470247 EXTL3O43909 919 aa12.28□□□□□ -0.44
SREBF1-209ENST00000470247 NPTXRO95502 500 aa12.28□□□□□ -0.44
SREBF1-209ENST00000470247 ATP1A3P13637 1013 aa12.28□□□□□ -0.44
SREBF1-209ENST00000470247 RAG1P15918 1043 aa12.28□□□□□ -0.44
SREBF1-209ENST00000470247 RPL13P26373 211 aaKnown RBP12.28□□□□□ -0.44
SREBF1-209ENST00000470247 TNFSF9P41273 254 aa12.28□□□□□ -0.44
SREBF1-209ENST00000470247 ACOT2P49753 483 aa12.28□□□□□ -0.44
SREBF1-209ENST00000470247 MARSP56192 900 aaKnown RBP12.28□□□□□ -0.44
SREBF1-209ENST00000470247 WNT7BP56706 349 aa12.28□□□□□ -0.44
SREBF1-209ENST00000470247 FAM189BP81408 668 aa12.28□□□□□ -0.44
SREBF1-209ENST00000470247 NOLC1Q14978 699 aaKnown RBP eCLIP12.28□□□□□ -0.44
SREBF1-209ENST00000470247 ZNF568Q3ZCX4 644 aa12.28□□□□□ -0.44
SREBF1-209ENST00000470247 SEZ6Q53EL9 994 aa12.28□□□□□ -0.44
SREBF1-209ENST00000470247 SLC27A1Q6PCB7 646 aa12.28□□□□□ -0.44
SREBF1-209ENST00000470247 APTXQ7Z2E3 356 aaKnown RBP12.28□□□□□ -0.44
SREBF1-209ENST00000470247 GPD1LQ8N335 351 aa12.28□□□□□ -0.44
SREBF1-209ENST00000470247 SMG8Q8ND04 991 aaKnown RBP12.28□□□□□ -0.44
SREBF1-209ENST00000470247 PLEKHO2Q8TD55 490 aa12.28□□□□□ -0.44
SREBF1-209ENST00000470247 NOC3LQ8WTT2 800 aaKnown RBP12.28□□□□□ -0.44
SREBF1-209ENST00000470247 MFSD14AQ96MC6 490 aa12.28□□□□□ -0.44
SREBF1-209ENST00000470247 ADAM2Q99965 735 aa12.28□□□□□ -0.44
SREBF1-209ENST00000470247 TCHPQ9BT92 498 aa12.28□□□□□ -0.44
SREBF1-209ENST00000470247 MKNK1Q9BUB5 465 aa12.28□□□□□ -0.44
SREBF1-209ENST00000470247 MSTO1Q9BUK6 570 aa12.28□□□□□ -0.44
SREBF1-209ENST00000470247 RNF39Q9H2S5 420 aa12.28□□□□□ -0.44
SREBF1-209ENST00000470247 PRDM5Q9NQX1 630 aaPredicted RBP12.28□□□□□ -0.44
SREBF1-209ENST00000470247 CPSF3Q9UKF6 684 aaKnown RBP12.28□□□□□ -0.44
SREBF1-209ENST00000470247 SCN5AQ14524 2016 aa12.28□□□□□ -0.44
SREBF1-209ENST00000470247 LRRC10BA6NIK2 292 aa12.27□□□□□ -0.45
SREBF1-209ENST00000470247 BECN2A8MW95 431 aa12.27□□□□□ -0.45
SREBF1-209ENST00000470247 C9IYK1 514 aa12.27□□□□□ -0.45
SREBF1-209ENST00000470247 ENPP3O14638 875 aa12.27□□□□□ -0.45
SREBF1-209ENST00000470247 MAPK13O15264 365 aa12.27□□□□□ -0.45
SREBF1-209ENST00000470247 EXOC3O60645 756 aa12.27□□□□□ -0.45
SREBF1-209ENST00000470247 ZNF623O75123 536 aa12.27□□□□□ -0.45
SREBF1-209ENST00000470247 CSF2RAP15509 400 aa12.27□□□□□ -0.45
SREBF1-209ENST00000470247 ATF7P17544 494 aaPredicted RBP12.27□□□□□ -0.45
SREBF1-209ENST00000470247 RFC2P35250 354 aa12.27□□□□□ -0.45
SREBF1-209ENST00000470247 PSMC2P35998 433 aaKnown RBP12.27□□□□□ -0.45
SREBF1-209ENST00000470247 GRM5P41594 1212 aa12.27□□□□□ -0.45
SREBF1-209ENST00000470247 NCBP1Q09161 790 aaKnown RBP12.27□□□□□ -0.45
SREBF1-209ENST00000470247 TMEM132AQ24JP5 1023 aa12.27□□□□□ -0.45
SREBF1-209ENST00000470247 DCAF4L1Q3SXM0 396 aa12.27□□□□□ -0.45
SREBF1-209ENST00000470247 HSP90AA4PQ58FG1 418 aa12.27□□□□□ -0.45
SREBF1-209ENST00000470247 C1orf220Q5T0J3 134 aa12.27□□□□□ -0.45
SREBF1-209ENST00000470247 CEP135Q66GS9 1140 aa12.27□□□□□ -0.45
SREBF1-209ENST00000470247 TWF2Q6IBS0 349 aaKnown RBP12.27□□□□□ -0.45
SREBF1-209ENST00000470247 C16orf59Q7L2K0 433 aa12.27□□□□□ -0.45
SREBF1-209ENST00000470247 DEFB128Q7Z7B8 93 aa12.27□□□□□ -0.45
SREBF1-209ENST00000470247 MRPL10Q7Z7H8 261 aaKnown RBP12.27□□□□□ -0.45
SREBF1-209ENST00000470247 THNSL1Q8IYQ7 743 aa12.27□□□□□ -0.45
SREBF1-209ENST00000470247 C7orf61Q8IZ16 206 aa12.27□□□□□ -0.45
SREBF1-209ENST00000470247 RDH13Q8NBN7 331 aa12.27□□□□□ -0.45
SREBF1-209ENST00000470247 SEPT8Q92599 483 aa12.27□□□□□ -0.45
SREBF1-209ENST00000470247 FAM213AQ9BRX8 229 aa12.27□□□□□ -0.45
SREBF1-209ENST00000470247 HTATIP2Q9BUP3 242 aa12.27□□□□□ -0.45
SREBF1-209ENST00000470247 TSPYL2Q9H2G4 693 aaPredicted RBP12.27□□□□□ -0.45
SREBF1-209ENST00000470247 RGS18Q9NS28 235 aa12.27□□□□□ -0.45
SREBF1-209ENST00000470247 FAM105AQ9NUU6 356 aa12.27□□□□□ -0.45
SREBF1-209ENST00000470247 HES2Q9Y543 173 aa12.27□□□□□ -0.45
SREBF1-209ENST00000470247 PCDHB2Q9Y5E7 798 aa12.27□□□□□ -0.45
SREBF1-209ENST00000470247 TANC1Q9C0D5 1861 aa12.26□□□□□ -0.45
SREBF1-209ENST00000470247 A0A0U1RQF3 1178 aa12.26□□□□□ -0.45
SREBF1-209ENST00000470247 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.26□□□□□ -0.45
SREBF1-209ENST00000470247 MEIS3P2A8K0S8 358 aa12.26□□□□□ -0.45
SREBF1-209ENST00000470247 SLC16A3O15427 465 aaKnown RBP12.26□□□□□ -0.45
SREBF1-209ENST00000470247 AP5Z1O43299 807 aa12.26□□□□□ -0.45
SREBF1-209ENST00000470247 FGFR1OPO95684 399 aaKnown RBP12.26□□□□□ -0.45
SREBF1-209ENST00000470247 LDHAP00338 332 aaKnown RBP12.26□□□□□ -0.45
SREBF1-209ENST00000470247 STAG3L1P0CL83 205 aa12.26□□□□□ -0.45
SREBF1-209ENST00000470247 HARSP12081 509 aaKnown RBP12.26□□□□□ -0.45
SREBF1-209ENST00000470247 ZSCAN20P17040 1043 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms