RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 CASP10Q92851 521 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 SLC47A1Q96FL8 570 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 ABHD17AQ96GS6 310 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 CRELD1Q96HD1 420 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 TNIP3Q96KP6 325 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 ART5Q96L15 291 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 CCDC138Q96M89 665 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 HS6ST2Q96MM7 605 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 TTC25Q96NG3 672 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 TBC1D32Q96NH3 1257 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 TRAPPC9Q96Q05 1148 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 TSG101Q99816 390 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 MOV10L1Q9BXT6 1211 aaKnown RBP5.51□□□□□ -1.53
COL3A1-205ENST00000470167 OSBPL7Q9BZF2 842 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 GSX2Q9BZM3 304 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 KIAA1683Q9H0B3 1180 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 LMAN2LQ9H0V9 348 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 CRLF2Q9HC73 371 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 NLRC4Q9NPP4 1024 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 LATS2Q9NRM7 1088 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 ANKEF1Q9NU02 776 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 EHD3Q9NZN3 535 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 CEP72Q9P209 647 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 ZFATQ9P243 1243 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 KIF17Q9P2E2 1029 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 DNAI1Q9UI46 699 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 ANAPC5Q9UJX4 755 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 CLEC4AQ9UMR7 237 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 ZBTB1Q9Y2K1 713 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 FAM169AQ9Y6X4 670 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 KIF24Q5T7B8 1368 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 GAPVD1Q14C86 1478 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 CNTLNQ9NXG0 1405 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 FAM221BA6H8Z2 402 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 SPECC1L-ADORA2AF8WAN1 911 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 J3KRW8 73 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 IGF2BP3O00425 579 aaKnown RBP eCLIP5.5□□□□□ -1.53
COL3A1-205ENST00000470167 E2F3O00716 465 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 CCNT1O60563 726 aaKnown RBP5.5□□□□□ -1.53
COL3A1-205ENST00000470167 MMP20O60882 483 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 SMIM24O75264 130 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 GADD45BO75293 160 aaPredicted RBP5.5□□□□□ -1.53
COL3A1-205ENST00000470167 TACC1O75410 805 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 DGKIO75912 1065 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 IL33O95760 270 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 F2P00734 622 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 HLA-DRAP01903 254 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 ITGB3P05106 788 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 IFIT2P09913 472 aaKnown RBP5.5□□□□□ -1.53
COL3A1-205ENST00000470167 RARAP10276 462 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 TOP1P11387 765 aaKnown RBP5.5□□□□□ -1.53
COL3A1-205ENST00000470167 EEF2P13639 858 aaKnown RBP5.5□□□□□ -1.53
COL3A1-205ENST00000470167 STMN1P16949 149 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 SYN1P17600 705 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 NFKB1P19838 968 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 CD33P20138 364 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 CAPN3P20807 821 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 ALAS2P22557 587 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 SFPQP23246 707 aaKnown RBP eCLIP5.5□□□□□ -1.53
COL3A1-205ENST00000470167 PMLP29590 882 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 ARHGAP25P42331 645 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 ST13P50502 369 aaKnown RBP5.5□□□□□ -1.53
COL3A1-205ENST00000470167 GSTO1P78417 241 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 S100A12P80511 92 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 FANCCQ00597 558 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 CUL1Q13616 776 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 CCINQ13939 588 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 CYLC2Q14093 348 aaPredicted RBP5.5□□□□□ -1.53
COL3A1-205ENST00000470167 FRG1Q14331 258 aaKnown RBP5.5□□□□□ -1.53
COL3A1-205ENST00000470167 ELF2Q15723 593 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 LETM2Q2VYF4 491 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 LEXMQ3ZCV2 418 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 CFAP100Q494V2 611 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 CCDC40Q4G0X9 1142 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 CDONQ4KMG0 1287 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 PDCD4Q53EL6 469 aaKnown RBP5.5□□□□□ -1.53
COL3A1-205ENST00000470167 CMPK2Q5EBM0 449 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 ZNF658Q5TYW1 1059 aaPredicted RBP5.5□□□□□ -1.53
COL3A1-205ENST00000470167 GRAMD4Q6IC98 578 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 TTC23LQ6PF05 361 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 C6orf89Q6UWU4 347 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 PLEKHM3Q6ZWE6 761 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 RHOUQ7L0Q8 258 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 GALNT7Q86SF2 657 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 HID1Q8IV36 788 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 C12orf56Q8IXR9 622 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 COLGALT2Q8IYK4 626 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 TRIM22Q8IYM9 498 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 HACE1Q8IYU2 909 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 ZNF565Q8N9K5 539 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 OR52K1Q8NGK4 314 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 GOT1L1Q8NHS2 421 aaPredicted RBP5.5□□□□□ -1.53
COL3A1-205ENST00000470167 CDC26Q8NHZ8 85 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.5□□□□□ -1.53
COL3A1-205ENST00000470167 NCSTNQ92542 709 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 ZNF837Q96EG3 531 aaPredicted RBP5.5□□□□□ -1.53
COL3A1-205ENST00000470167 PGBD1Q96JS3 809 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 RPRD1AQ96P16 312 aaPredicted RBP5.5□□□□□ -1.53
COL3A1-205ENST00000470167 NUDCD1Q96RS6 583 aa5.5□□□□□ -1.53
COL3A1-205ENST00000470167 MPHOSPH9Q99550 1183 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms