RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 SMTNP53814 917 aa14.68□□□□□ -0.06
BRCA1-209ENST00000470026 MAP3K10Q02779 954 aa14.68□□□□□ -0.06
BRCA1-209ENST00000470026 RASA3Q14644 834 aa14.68□□□□□ -0.06
BRCA1-209ENST00000470026 TNIP1Q15025 636 aa14.68□□□□□ -0.06
BRCA1-209ENST00000470026 SEL1L2Q5TEA6 688 aa14.68□□□□□ -0.06
BRCA1-209ENST00000470026 DENND2CQ68D51 928 aa14.68□□□□□ -0.06
BRCA1-209ENST00000470026 ZNF746Q6NUN9 644 aaPredicted RBP14.68□□□□□ -0.06
BRCA1-209ENST00000470026 CYFIP1Q7L576 1253 aa14.68□□□□□ -0.06
BRCA1-209ENST00000470026 HELQQ8TDG4 1101 aa14.68□□□□□ -0.06
BRCA1-209ENST00000470026 P3H4Q92791 437 aa14.68□□□□□ -0.06
BRCA1-209ENST00000470026 ART4Q93070 314 aa14.68□□□□□ -0.06
BRCA1-209ENST00000470026 ZNF317Q96PQ6 595 aaPredicted RBP14.68□□□□□ -0.06
BRCA1-209ENST00000470026 OSBPL7Q9BZF2 842 aa14.68□□□□□ -0.06
BRCA1-209ENST00000470026 CCDC134Q9H6E4 229 aa14.68□□□□□ -0.06
BRCA1-209ENST00000470026 EP400Q96L91 3159 aa14.68□□□□□ -0.06
BRCA1-209ENST00000470026 ZNFX1Q9P2E3 1918 aaKnown RBP14.68□□□□□ -0.06
BRCA1-209ENST00000470026 ASTN2O75129 1339 aaPredicted RBP14.68□□□□□ -0.06
BRCA1-209ENST00000470026 RASSF9O75901 435 aa14.68□□□□□ -0.06
BRCA1-209ENST00000470026 RARGP13631 454 aa14.68□□□□□ -0.06
BRCA1-209ENST00000470026 COILP38432 576 aaPredicted RBP14.68□□□□□ -0.06
BRCA1-209ENST00000470026 MRPS9P82933 396 aaKnown RBP14.68□□□□□ -0.06
BRCA1-209ENST00000470026 MESDQ14696 234 aa14.68□□□□□ -0.06
BRCA1-209ENST00000470026 RSBN1LQ6PCB5 846 aaPredicted RBP14.68□□□□□ -0.06
BRCA1-209ENST00000470026 CCDC137Q6PK04 289 aaKnown RBP14.68□□□□□ -0.06
BRCA1-209ENST00000470026 MAEAQ7L5Y9 396 aa14.68□□□□□ -0.06
BRCA1-209ENST00000470026 CCDC13Q8IYE1 715 aa14.68□□□□□ -0.06
BRCA1-209ENST00000470026 ATXN2LQ8WWM7 1075 aaKnown RBP14.68□□□□□ -0.06
BRCA1-209ENST00000470026 DDX1Q92499 740 aaKnown RBP14.68□□□□□ -0.06
BRCA1-209ENST00000470026 SEMA4DQ92854 862 aa14.68□□□□□ -0.06
BRCA1-209ENST00000470026 HVCN1Q96D96 273 aa14.68□□□□□ -0.06
BRCA1-209ENST00000470026 CABS1Q96KC9 395 aa14.68□□□□□ -0.06
BRCA1-209ENST00000470026 AGBL1Q96MI9 1066 aa14.68□□□□□ -0.06
BRCA1-209ENST00000470026 MTRF1LQ9UGC7 380 aaKnown RBP14.68□□□□□ -0.06
BRCA1-209ENST00000470026 PGAP2Q9UHJ9 254 aa14.68□□□□□ -0.06
BRCA1-209ENST00000470026 CLRN2A0PK11 232 aa14.67□□□□□ -0.06
BRCA1-209ENST00000470026 CYP26A1O43174 497 aa14.67□□□□□ -0.06
BRCA1-209ENST00000470026 AGTP01019 485 aa14.67□□□□□ -0.06
BRCA1-209ENST00000470026 ADSSP30520 456 aa14.67□□□□□ -0.06
BRCA1-209ENST00000470026 YWHABP31946 246 aaKnown RBP14.67□□□□□ -0.06
BRCA1-209ENST00000470026 MFAP3P55082 362 aa14.67□□□□□ -0.06
BRCA1-209ENST00000470026 ENPEPQ07075 957 aa14.67□□□□□ -0.06
BRCA1-209ENST00000470026 ADCY2Q08462 1091 aa14.67□□□□□ -0.06
BRCA1-209ENST00000470026 SLC29A2Q14542 456 aa14.67□□□□□ -0.06
BRCA1-209ENST00000470026 SLMAPQ14BN4 828 aa14.67□□□□□ -0.06
BRCA1-209ENST00000470026 C6orf118Q5T5N4 469 aa14.67□□□□□ -0.06
BRCA1-209ENST00000470026 SLC47A2Q86VL8 602 aa14.67□□□□□ -0.06
BRCA1-209ENST00000470026 TAX1BP1Q86VP1 789 aa14.67□□□□□ -0.06
BRCA1-209ENST00000470026 CACNA2D3Q8IZS8 1091 aa14.67□□□□□ -0.06
BRCA1-209ENST00000470026 SAMD3Q8N6K7 520 aa14.67□□□□□ -0.06
BRCA1-209ENST00000470026 ZNF564Q8TBZ8 553 aaPredicted RBP14.67□□□□□ -0.06
BRCA1-209ENST00000470026 PSPC1Q8WXF1 523 aaKnown RBP14.67□□□□□ -0.06
BRCA1-209ENST00000470026 CHMP6Q96FZ7 201 aa14.67□□□□□ -0.06
BRCA1-209ENST00000470026 FBXL18Q96ME1 805 aa14.67□□□□□ -0.06
BRCA1-209ENST00000470026 GLIS2Q9BZE0 524 aaPredicted RBP14.67□□□□□ -0.06
BRCA1-209ENST00000470026 SEMA4AQ9H3S1 761 aa14.67□□□□□ -0.06
BRCA1-209ENST00000470026 LRRC19Q9H756 370 aa14.67□□□□□ -0.06
BRCA1-209ENST00000470026 TBC1D22BQ9NU19 505 aa14.67□□□□□ -0.06
BRCA1-209ENST00000470026 MAP3K20Q9NYL2 800 aaKnown RBP14.67□□□□□ -0.06
BRCA1-209ENST00000470026 CCPG1Q9ULG6 757 aa14.67□□□□□ -0.06
BRCA1-209ENST00000470026 BCS1LQ9Y276 419 aa14.67□□□□□ -0.06
BRCA1-209ENST00000470026 NFIBO00712 420 aa14.66□□□□□ -0.06
BRCA1-209ENST00000470026 GRIN3BO60391 1043 aa14.66□□□□□ -0.06
BRCA1-209ENST00000470026 MMEP08473 750 aa14.66□□□□□ -0.06
BRCA1-209ENST00000470026 RARAP10276 462 aa14.66□□□□□ -0.06
BRCA1-209ENST00000470026 CDR2Q01850 454 aa14.66□□□□□ -0.06
BRCA1-209ENST00000470026 RNF187Q5TA31 235 aaPredicted RBP14.66□□□□□ -0.06
BRCA1-209ENST00000470026 GKAP1Q5VSY0 366 aaPredicted RBP14.66□□□□□ -0.06
BRCA1-209ENST00000470026 KRT39Q6A163 491 aa14.66□□□□□ -0.06
BRCA1-209ENST00000470026 CCDC121Q6ZUS5 278 aa14.66□□□□□ -0.06
BRCA1-209ENST00000470026 MDM1Q8TC05 714 aa14.66□□□□□ -0.06
BRCA1-209ENST00000470026 TMC2Q8TDI7 906 aa14.66□□□□□ -0.06
BRCA1-209ENST00000470026 PARD3BQ8TEW8 1205 aa14.66□□□□□ -0.06
BRCA1-209ENST00000470026 NUP85Q9BW27 656 aa14.66□□□□□ -0.06
BRCA1-209ENST00000470026 TMEM8AQ9HCN3 771 aa14.66□□□□□ -0.06
BRCA1-209ENST00000470026 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.66□□□□□ -0.06
BRCA1-209ENST00000470026 MTUS1Q9ULD2 1270 aa14.66□□□□□ -0.06
BRCA1-209ENST00000470026 TCRBV7S2A1N4TA0A589 114 aa14.66□□□□□ -0.06
BRCA1-209ENST00000470026 TMEM110-MUSTN1A8MSY1 372 aa14.66□□□□□ -0.06
BRCA1-209ENST00000470026 FSCN2O14926 492 aa14.66□□□□□ -0.06
BRCA1-209ENST00000470026 PPIP5K2O43314 1243 aa14.66□□□□□ -0.06
BRCA1-209ENST00000470026 RIPK2O43353 540 aa14.66□□□□□ -0.06
BRCA1-209ENST00000470026 GHRP10912 638 aa14.66□□□□□ -0.06
BRCA1-209ENST00000470026 CYP11B1P15538 503 aa14.66□□□□□ -0.06
BRCA1-209ENST00000470026 CHRNA5P30532 468 aa14.66□□□□□ -0.06
BRCA1-209ENST00000470026 GTF2H1P32780 548 aa14.66□□□□□ -0.06
BRCA1-209ENST00000470026 ANKRD20A8PQ5CZ79 823 aa14.66□□□□□ -0.06
BRCA1-209ENST00000470026 MSL1Q68DK7 614 aa14.66□□□□□ -0.06
BRCA1-209ENST00000470026 MFSD5Q6N075 450 aa14.66□□□□□ -0.06
BRCA1-209ENST00000470026 MCF2L2Q86YR7 1114 aa14.66□□□□□ -0.06
BRCA1-209ENST00000470026 MAP4K3Q8IVH8 894 aa14.66□□□□□ -0.06
BRCA1-209ENST00000470026 ANKEF1Q9NU02 776 aa14.66□□□□□ -0.06
BRCA1-209ENST00000470026 EXOC7Q9UPT5 735 aa14.66□□□□□ -0.06
BRCA1-209ENST00000470026 ANKRD63C9JTQ0 380 aa14.65□□□□□ -0.06
BRCA1-209ENST00000470026 BACH1O14867 736 aa14.65□□□□□ -0.06
BRCA1-209ENST00000470026 TP73O15350 636 aa14.65□□□□□ -0.06
BRCA1-209ENST00000470026 SLC16A4O15374 487 aa14.65□□□□□ -0.06
BRCA1-209ENST00000470026 CHN1P15882 459 aa14.65□□□□□ -0.06
BRCA1-209ENST00000470026 GTF2A1P52655 376 aaPredicted RBP14.65□□□□□ -0.06
BRCA1-209ENST00000470026 PEX3P56589 373 aa14.65□□□□□ -0.06
BRCA1-209ENST00000470026 DLGAP5Q15398 846 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms