RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 QARSP47897 775 aaKnown RBP20.37■□□□□ 0.85
TTC28-205ENST00000469670 GPR161Q8N6U8 529 aaKnown RBP20.37■□□□□ 0.85
TTC28-205ENST00000469670 RNF149Q8NC42 400 aa20.37■□□□□ 0.85
TTC28-205ENST00000469670 MBOAT7Q96N66 472 aa20.37■□□□□ 0.85
TTC28-205ENST00000469670 DDX23Q9BUQ8 820 aaKnown RBP20.37■□□□□ 0.85
TTC28-205ENST00000469670 SH3GLB2Q9NR46 395 aa20.37■□□□□ 0.85
TTC28-205ENST00000469670 BMP2KQ9NSY1 1161 aaPredicted RBP20.37■□□□□ 0.85
TTC28-205ENST00000469670 CDH7Q9ULB5 785 aa20.37■□□□□ 0.85
TTC28-205ENST00000469670 PPME1Q9Y570 386 aa20.37■□□□□ 0.85
TTC28-205ENST00000469670 FANCMQ8IYD8 2048 aa20.36■□□□□ 0.85
TTC28-205ENST00000469670 EML1O00423 815 aa20.36■□□□□ 0.85
TTC28-205ENST00000469670 DKC1O60832 514 aaKnown RBP eCLIP20.36■□□□□ 0.85
TTC28-205ENST00000469670 RFC5P40937 340 aa20.36■□□□□ 0.85
TTC28-205ENST00000469670 ATXN1P54253 815 aaKnown RBP20.36■□□□□ 0.85
TTC28-205ENST00000469670 CREMQ03060 361 aa20.36■□□□□ 0.85
TTC28-205ENST00000469670 PRKCQQ04759 706 aa20.36■□□□□ 0.85
TTC28-205ENST00000469670 CSTF1Q05048 431 aaKnown RBP20.36■□□□□ 0.85
TTC28-205ENST00000469670 UBXN2BQ14CS0 331 aa20.36■□□□□ 0.85
TTC28-205ENST00000469670 MLF2Q15773 248 aaPredicted RBP20.36■□□□□ 0.85
TTC28-205ENST00000469670 GRASPQ7Z6J2 395 aaPredicted RBP20.36■□□□□ 0.85
TTC28-205ENST00000469670 CCDC51Q96ER9 411 aa20.36■□□□□ 0.85
TTC28-205ENST00000469670 APOL6Q9BWW8 343 aa20.36■□□□□ 0.85
TTC28-205ENST00000469670 MTF2Q9Y483 593 aaPredicted RBP20.36■□□□□ 0.85
TTC28-205ENST00000469670 PCDHGA2Q9Y5H1 932 aa20.36■□□□□ 0.85
TTC28-205ENST00000469670 ASAP2O43150 1006 aa20.35■□□□□ 0.85
TTC28-205ENST00000469670 TSPAN1O60635 241 aa20.35■□□□□ 0.85
TTC28-205ENST00000469670 IFNAR1P17181 557 aa20.35■□□□□ 0.85
TTC28-205ENST00000469670 AXLP30530 894 aa20.35■□□□□ 0.85
TTC28-205ENST00000469670 SLC44A4Q53GD3 710 aa20.35■□□□□ 0.85
TTC28-205ENST00000469670 NOTUMQ6P988 496 aa20.35■□□□□ 0.85
TTC28-205ENST00000469670 MOXD1Q6UVY6 613 aa20.35■□□□□ 0.85
TTC28-205ENST00000469670 MTSS1LQ765P7 747 aa20.35■□□□□ 0.85
TTC28-205ENST00000469670 FERMT3Q86UX7 667 aa20.35■□□□□ 0.85
TTC28-205ENST00000469670 TCP11Q8WWU5 503 aa20.35■□□□□ 0.85
TTC28-205ENST00000469670 ATRIPQ8WXE1 791 aa20.35■□□□□ 0.85
TTC28-205ENST00000469670 CPB2Q96IY4 423 aa20.35■□□□□ 0.85
TTC28-205ENST00000469670 OSBPL6Q9BZF3 934 aa20.35■□□□□ 0.85
TTC28-205ENST00000469670 CSRNP2Q9H175 543 aa20.35■□□□□ 0.85
TTC28-205ENST00000469670 WRAP73Q9P2S5 460 aaPredicted RBP20.35■□□□□ 0.85
TTC28-205ENST00000469670 ADAM28Q9UKQ2 775 aa20.35■□□□□ 0.85
TTC28-205ENST00000469670 PCDHA4Q9UN74 947 aa20.35■□□□□ 0.85
TTC28-205ENST00000469670 GIT1Q9Y2X7 761 aa20.35■□□□□ 0.85
TTC28-205ENST00000469670 CACNA1IQ9P0X4 2223 aa20.34■□□□□ 0.85
TTC28-205ENST00000469670 FAM170BA6NMN3 283 aa20.34■□□□□ 0.85
TTC28-205ENST00000469670 P4HBP07237 508 aaKnown RBP20.34■□□□□ 0.85
TTC28-205ENST00000469670 NTHL1P78549 312 aa20.34■□□□□ 0.85
TTC28-205ENST00000469670 PCBP1Q15365 356 aaKnown RBP eCLIP20.34■□□□□ 0.85
TTC28-205ENST00000469670 SECISBP2LQ93073 1101 aaKnown RBP20.34■□□□□ 0.85
TTC28-205ENST00000469670 DDX25Q9UHL0 483 aaKnown RBP20.34■□□□□ 0.85
TTC28-205ENST00000469670 FBXW11Q9UKB1 542 aa20.34■□□□□ 0.85
TTC28-205ENST00000469670 HNRNPA1P09651 372 aaKnown RBP eCLIP20.33■□□□□ 0.85
TTC28-205ENST00000469670 MAGEA9P43362 315 aa20.33■□□□□ 0.85
TTC28-205ENST00000469670 NCBP1Q09161 790 aaKnown RBP20.33■□□□□ 0.85
TTC28-205ENST00000469670 PPP2R5CQ13362 524 aa20.33■□□□□ 0.85
TTC28-205ENST00000469670 EMC2Q15006 297 aa20.33■□□□□ 0.85
TTC28-205ENST00000469670 PRSS55Q6UWB4 352 aaPredicted RBP20.33■□□□□ 0.85
TTC28-205ENST00000469670 RSPO2Q6UXX9 243 aaPredicted RBP20.33■□□□□ 0.85
TTC28-205ENST00000469670 HACE1Q8IYU2 909 aa20.33■□□□□ 0.85
TTC28-205ENST00000469670 ZBTB44Q8NCP5 570 aa20.33■□□□□ 0.85
TTC28-205ENST00000469670 GSTCDQ8NEC7 633 aa20.33■□□□□ 0.85
TTC28-205ENST00000469670 RABGGTAQ92696 567 aa20.33■□□□□ 0.85
TTC28-205ENST00000469670 FGF13Q92913 245 aa20.33■□□□□ 0.85
TTC28-205ENST00000469670 TRIM6Q9C030 488 aaPredicted RBP20.33■□□□□ 0.85
TTC28-205ENST00000469670 SLKQ9H2G2 1235 aaPredicted RBP20.33■□□□□ 0.85
TTC28-205ENST00000469670 NXF3Q9H4D5 531 aaKnown RBP20.33■□□□□ 0.85
TTC28-205ENST00000469670 LTB4R2Q9NPC1 389 aa20.33■□□□□ 0.85
TTC28-205ENST00000469670 ZSCAN32Q9NX65 697 aa20.33■□□□□ 0.85
TTC28-205ENST00000469670 VAV3Q9UKW4 847 aa20.33■□□□□ 0.85
TTC28-205ENST00000469670 SMG5Q9UPR3 1016 aaKnown RBP20.33■□□□□ 0.85
TTC28-205ENST00000469670 KMT2BQ9UMN6 2715 aaPredicted RBP20.33■□□□□ 0.84
TTC28-205ENST00000469670 TPRP12270 2363 aaKnown RBP20.32■□□□□ 0.84
TTC28-205ENST00000469670 PRR5-ARHGAP8B1AHC4 643 aa20.32■□□□□ 0.84
TTC28-205ENST00000469670 SLC37A4O43826 429 aa20.32■□□□□ 0.84
TTC28-205ENST00000469670 TADA2AO75478 443 aa20.32■□□□□ 0.84
TTC28-205ENST00000469670 PTENP60484 403 aa20.32■□□□□ 0.84
TTC28-205ENST00000469670 ARHGAP8P85298 464 aa20.32■□□□□ 0.84
TTC28-205ENST00000469670 PFKPQ01813 784 aa20.32■□□□□ 0.84
TTC28-205ENST00000469670 LMNB2Q03252 620 aa20.32■□□□□ 0.84
TTC28-205ENST00000469670 RTP2Q5QGT7 225 aa20.32■□□□□ 0.84
TTC28-205ENST00000469670 PPM1LQ5SGD2 360 aa20.32■□□□□ 0.84
TTC28-205ENST00000469670 LIN9Q5TKA1 542 aa20.32■□□□□ 0.84
TTC28-205ENST00000469670 BLIDQ8IZY5 108 aa20.32■□□□□ 0.84
TTC28-205ENST00000469670 JAKMIP1Q96N16 626 aaKnown RBP20.32■□□□□ 0.84
TTC28-205ENST00000469670 EPC1Q9H2F5 836 aa20.32■□□□□ 0.84
TTC28-205ENST00000469670 CDV3Q9UKY7 258 aaKnown RBP20.32■□□□□ 0.84
TTC28-205ENST00000469670 COL4A3Q01955 1670 aa20.32■□□□□ 0.84
TTC28-205ENST00000469670 INO80B-WBP1J3KQ70 363 aa20.31■□□□□ 0.84
TTC28-205ENST00000469670 M0R2N6 131 aa20.31■□□□□ 0.84
TTC28-205ENST00000469670 CD72P21854 359 aa20.31■□□□□ 0.84
TTC28-205ENST00000469670 AKAP5P24588 427 aa20.31■□□□□ 0.84
TTC28-205ENST00000469670 YWHABP31946 246 aaKnown RBP20.31■□□□□ 0.84
TTC28-205ENST00000469670 GRIK3Q13003 919 aa20.31■□□□□ 0.84
TTC28-205ENST00000469670 BLOC1S2Q6QNY1 142 aa20.31■□□□□ 0.84
TTC28-205ENST00000469670 OTUD6AQ7L8S5 288 aa20.31■□□□□ 0.84
TTC28-205ENST00000469670 C4orf19Q8IY42 314 aa20.31■□□□□ 0.84
TTC28-205ENST00000469670 ITFG1Q8TB96 612 aa20.31■□□□□ 0.84
TTC28-205ENST00000469670 MTRQ99707 1265 aa20.31■□□□□ 0.84
TTC28-205ENST00000469670 NCOA5Q9HCD5 579 aaKnown RBP20.31■□□□□ 0.84
TTC28-205ENST00000469670 POLIQ9UNA4 740 aa20.31■□□□□ 0.84
TTC28-205ENST00000469670 SF3B1O75533 1304 aaKnown RBP eCLIP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms