RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 ZNF668Q96K58 619 aaPredicted RBP16.05■□□□□ 0.16
LIMS2-213ENST00000469300 NUDCD1Q96RS6 583 aa16.05■□□□□ 0.16
LIMS2-213ENST00000469300 PARVAQ9NVD7 372 aa16.05■□□□□ 0.16
LIMS2-213ENST00000469300 ATP8A1Q9Y2Q0 1164 aa16.05■□□□□ 0.16
LIMS2-213ENST00000469300 TCRBV5S4A2TA0A5A2 114 aa16.04■□□□□ 0.16
LIMS2-213ENST00000469300 DPYSL4O14531 572 aa16.04■□□□□ 0.16
LIMS2-213ENST00000469300 SNRNP35Q16560 246 aaKnown RBP16.04■□□□□ 0.16
LIMS2-213ENST00000469300 NBPF9Q3BBW0 867 aa16.04■□□□□ 0.16
LIMS2-213ENST00000469300 EFHC2Q5JST6 749 aa16.04■□□□□ 0.16
LIMS2-213ENST00000469300 ZNF484Q5JVG2 852 aa16.04■□□□□ 0.16
LIMS2-213ENST00000469300 C1orf228Q6PIY5 440 aa16.04■□□□□ 0.16
LIMS2-213ENST00000469300 VPS39Q96JC1 886 aa16.04■□□□□ 0.16
LIMS2-213ENST00000469300 WDR70Q9NW82 654 aa16.04■□□□□ 0.16
LIMS2-213ENST00000469300 APEX2Q9UBZ4 518 aa16.04■□□□□ 0.16
LIMS2-213ENST00000469300 SSU72P8A0A1W2PR75 194 aa16.04■□□□□ 0.16
LIMS2-213ENST00000469300 RALAP11233 206 aa16.04■□□□□ 0.16
LIMS2-213ENST00000469300 CPB1P15086 417 aa16.04■□□□□ 0.16
LIMS2-213ENST00000469300 OAZ1P54368 228 aa16.04■□□□□ 0.16
LIMS2-213ENST00000469300 GNGT1P63211 74 aa16.04■□□□□ 0.16
LIMS2-213ENST00000469300 GLB1LQ6UWU2 654 aa16.04■□□□□ 0.16
LIMS2-213ENST00000469300 POLIQ9UNA4 740 aa16.04■□□□□ 0.16
LIMS2-213ENST00000469300 AGAP1Q9UPQ3 857 aa16.04■□□□□ 0.16
LIMS2-213ENST00000469300 SAT1P21673 171 aa16.04■□□□□ 0.16
LIMS2-213ENST00000469300 FMO5P49326 533 aa16.04■□□□□ 0.16
LIMS2-213ENST00000469300 ACTR2P61160 394 aa16.04■□□□□ 0.16
LIMS2-213ENST00000469300 ITIH6Q6UXX5 1313 aa16.04■□□□□ 0.16
LIMS2-213ENST00000469300 PASD1Q8IV76 773 aa16.04■□□□□ 0.16
LIMS2-213ENST00000469300 CEP120Q8N960 986 aa16.04■□□□□ 0.16
LIMS2-213ENST00000469300 SKA2Q8WVK7 121 aaPredicted RBP16.04■□□□□ 0.16
LIMS2-213ENST00000469300 ARHGEF2Q92974 986 aaKnown RBP16.04■□□□□ 0.16
LIMS2-213ENST00000469300 NUP85Q9BW27 656 aa16.04■□□□□ 0.16
LIMS2-213ENST00000469300 INTS9Q9NV88 658 aaKnown RBP16.04■□□□□ 0.16
LIMS2-213ENST00000469300 MSH4O15457 936 aa16.03■□□□□ 0.16
LIMS2-213ENST00000469300 PAMP19021 973 aa16.03■□□□□ 0.16
LIMS2-213ENST00000469300 BBS9Q3SYG4 887 aa16.03■□□□□ 0.16
LIMS2-213ENST00000469300 NBPF12Q5TAG4 269 aaPredicted RBP16.03■□□□□ 0.16
LIMS2-213ENST00000469300 ALS2CLQ60I27 953 aa16.03■□□□□ 0.16
LIMS2-213ENST00000469300 DHX40Q8IX18 779 aaKnown RBP16.03■□□□□ 0.16
LIMS2-213ENST00000469300 CAPS2Q9BXY5 557 aa16.03■□□□□ 0.16
LIMS2-213ENST00000469300 LMCD1Q9NZU5 365 aa16.03■□□□□ 0.16
LIMS2-213ENST00000469300 GPC4O75487 556 aa16.03■□□□□ 0.16
LIMS2-213ENST00000469300 VCAM1P19320 739 aa16.03■□□□□ 0.16
LIMS2-213ENST00000469300 ATF7IP2Q5U623 682 aa16.03■□□□□ 0.16
LIMS2-213ENST00000469300 DNERQ8NFT8 737 aa16.03■□□□□ 0.16
LIMS2-213ENST00000469300 A0A1B0GTH6 734 aa16.03■□□□□ 0.16
LIMS2-213ENST00000469300 TEX33O43247 280 aa16.03■□□□□ 0.16
LIMS2-213ENST00000469300 MT-ND3P03897 115 aa16.03■□□□□ 0.16
LIMS2-213ENST00000469300 HOXC6P09630 235 aa16.03■□□□□ 0.16
LIMS2-213ENST00000469300 NNMTP40261 264 aa16.03■□□□□ 0.16
LIMS2-213ENST00000469300 CDK17Q00537 523 aa16.03■□□□□ 0.16
LIMS2-213ENST00000469300 STK4Q13043 487 aa16.03■□□□□ 0.16
LIMS2-213ENST00000469300 EFCAB12Q6NXP0 572 aa16.03■□□□□ 0.16
LIMS2-213ENST00000469300 C3orf67Q6ZVT6 689 aa16.03■□□□□ 0.16
LIMS2-213ENST00000469300 PYROXD1Q8WU10 500 aa16.03■□□□□ 0.16
LIMS2-213ENST00000469300 AGPAT1Q99943 283 aa16.03■□□□□ 0.16
LIMS2-213ENST00000469300 DDX50Q9BQ39 737 aaKnown RBP16.03■□□□□ 0.16
LIMS2-213ENST00000469300 TRPV6Q9H1D0 765 aa16.03■□□□□ 0.16
LIMS2-213ENST00000469300 SLC1A1P43005 524 aa16.03■□□□□ 0.16
LIMS2-213ENST00000469300 NCOA4Q13772 614 aa16.03■□□□□ 0.16
LIMS2-213ENST00000469300 APPL2Q8NEU8 664 aa16.03■□□□□ 0.16
LIMS2-213ENST00000469300 ANGPTL3Q9Y5C1 460 aa16.03■□□□□ 0.16
LIMS2-213ENST00000469300 ADGRG1Q9Y653 693 aa16.03■□□□□ 0.16
LIMS2-213ENST00000469300 NKRFO15226 690 aaKnown RBP eCLIP16.02■□□□□ 0.16
LIMS2-213ENST00000469300 RTN2O75298 545 aa16.02■□□□□ 0.16
LIMS2-213ENST00000469300 ARL4CP56559 192 aa16.02■□□□□ 0.16
LIMS2-213ENST00000469300 PRPF31Q8WWY3 499 aaKnown RBP16.02■□□□□ 0.16
LIMS2-213ENST00000469300 AGXT2Q9BYV1 514 aa16.02■□□□□ 0.16
LIMS2-213ENST00000469300 KLHL8Q9P2G9 620 aaPredicted RBP16.02■□□□□ 0.16
LIMS2-213ENST00000469300 PPME1Q9Y570 386 aa16.02■□□□□ 0.16
LIMS2-213ENST00000469300 GRID2IPA4D2P6 1211 aa16.02■□□□□ 0.16
LIMS2-213ENST00000469300 H3BRJ5 948 aa16.02■□□□□ 0.16
LIMS2-213ENST00000469300 KPNA6O60684 536 aa16.02■□□□□ 0.16
LIMS2-213ENST00000469300 ITGA4P13612 1032 aa16.02■□□□□ 0.16
LIMS2-213ENST00000469300 C2orf54Q08AI8 447 aa16.02■□□□□ 0.16
LIMS2-213ENST00000469300 FAM102AQ5T9C2 384 aaPredicted RBP16.02■□□□□ 0.16
LIMS2-213ENST00000469300 BTBD8Q5XKL5 378 aa16.02■□□□□ 0.16
LIMS2-213ENST00000469300 NOTUMQ6P988 496 aa16.02■□□□□ 0.16
LIMS2-213ENST00000469300 ANKS1AQ92625 1134 aa16.02■□□□□ 0.16
LIMS2-213ENST00000469300 MAGEB5Q9BZ81 275 aa16.02■□□□□ 0.16
LIMS2-213ENST00000469300 MANSC4A6NHS7 340 aaPredicted RBP16.02■□□□□ 0.15
LIMS2-213ENST00000469300 USP27XA6NNY8 438 aa16.02■□□□□ 0.15
LIMS2-213ENST00000469300 TGFB3P10600 412 aa16.02■□□□□ 0.15
LIMS2-213ENST00000469300 CA4P22748 312 aa16.02■□□□□ 0.15
LIMS2-213ENST00000469300 GFPT1Q06210 699 aaPredicted RBP16.02■□□□□ 0.15
LIMS2-213ENST00000469300 CATSPER3Q86XQ3 398 aa16.02■□□□□ 0.15
LIMS2-213ENST00000469300 CNOT10Q9H9A5 744 aaKnown RBP16.02■□□□□ 0.15
LIMS2-213ENST00000469300 UVRAGQ9P2Y5 699 aa16.02■□□□□ 0.15
LIMS2-213ENST00000469300 PCSK1P29120 753 aa16.02■□□□□ 0.15
LIMS2-213ENST00000469300 SNCBQ16143 134 aa16.02■□□□□ 0.15
LIMS2-213ENST00000469300 STRNO43815 780 aa16.01■□□□□ 0.15
LIMS2-213ENST00000469300 EXTL3O43909 919 aa16.01■□□□□ 0.15
LIMS2-213ENST00000469300 CLTAP09496 248 aa16.01■□□□□ 0.15
LIMS2-213ENST00000469300 TCF7P36402 384 aaPredicted RBP16.01■□□□□ 0.15
LIMS2-213ENST00000469300 USP50Q70EL3 339 aaPredicted RBP16.01■□□□□ 0.15
LIMS2-213ENST00000469300 GLYCTKQ8IVS8 523 aa16.01■□□□□ 0.15
LIMS2-213ENST00000469300 TMEM8AQ9HCN3 771 aa16.01■□□□□ 0.15
LIMS2-213ENST00000469300 NPHP3-ACAD11A0A0J9YXS1 232 aa16.01■□□□□ 0.15
LIMS2-213ENST00000469300 WNT10BO00744 389 aa16.01■□□□□ 0.15
LIMS2-213ENST00000469300 SHMT1P34896 483 aa16.01■□□□□ 0.15
LIMS2-213ENST00000469300 PNPLA4P41247 253 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms