RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 GLUD2P49448 558 aa13.64□□□□□ -0.23
HDAC3-204ENST00000469207 CLCN5P51795 746 aa13.64□□□□□ -0.23
HDAC3-204ENST00000469207 DSG1Q02413 1049 aa13.64□□□□□ -0.23
HDAC3-204ENST00000469207 MXD4Q14582 209 aaPredicted RBP13.64□□□□□ -0.23
HDAC3-204ENST00000469207 FRMD5Q7Z6J6 570 aa13.64□□□□□ -0.23
HDAC3-204ENST00000469207 SLFN12Q8IYM2 578 aa13.64□□□□□ -0.23
HDAC3-204ENST00000469207 SIX5Q8N196 739 aa13.64□□□□□ -0.23
HDAC3-204ENST00000469207 CNNM3Q8NE01 707 aa13.64□□□□□ -0.23
HDAC3-204ENST00000469207 ZNF707Q96C28 371 aaPredicted RBP13.64□□□□□ -0.23
HDAC3-204ENST00000469207 PAAF1Q9BRP4 392 aa13.64□□□□□ -0.23
HDAC3-204ENST00000469207 IRF2BPLQ9H1B7 796 aa13.64□□□□□ -0.23
HDAC3-204ENST00000469207 TTC12Q9H892 705 aaPredicted RBP13.64□□□□□ -0.23
HDAC3-204ENST00000469207 RXFP1Q9HBX9 757 aa13.64□□□□□ -0.23
HDAC3-204ENST00000469207 POLD4Q9HCU8 107 aa13.64□□□□□ -0.23
HDAC3-204ENST00000469207 UBN1Q9NPG3 1134 aa13.64□□□□□ -0.23
HDAC3-204ENST00000469207 CHST7Q9NS84 486 aa13.64□□□□□ -0.23
HDAC3-204ENST00000469207 PARP2Q9UGN5 583 aa13.64□□□□□ -0.23
HDAC3-204ENST00000469207 DENND4AQ7Z401 1863 aa13.63□□□□□ -0.23
HDAC3-204ENST00000469207 PROB1E7EW31 1015 aa13.63□□□□□ -0.23
HDAC3-204ENST00000469207 TGM5O43548 720 aa13.63□□□□□ -0.23
HDAC3-204ENST00000469207 JAK2O60674 1132 aa13.63□□□□□ -0.23
HDAC3-204ENST00000469207 ADH1AP07327 375 aa13.63□□□□□ -0.23
HDAC3-204ENST00000469207 ATP2B1P20020 1258 aa13.63□□□□□ -0.23
HDAC3-204ENST00000469207 IGFBP6P24592 240 aaPredicted RBP13.63□□□□□ -0.23
HDAC3-204ENST00000469207 AXLP30530 894 aa13.63□□□□□ -0.23
HDAC3-204ENST00000469207 RARRES1P49788 294 aa13.63□□□□□ -0.23
HDAC3-204ENST00000469207 NUBP1P53384 320 aa13.63□□□□□ -0.23
HDAC3-204ENST00000469207 CALCRLQ16602 461 aa13.63□□□□□ -0.23
HDAC3-204ENST00000469207 PRSS55Q6UWB4 352 aaPredicted RBP13.63□□□□□ -0.23
HDAC3-204ENST00000469207 C15orf39Q6ZRI6 1047 aa13.63□□□□□ -0.23
HDAC3-204ENST00000469207 IFNLR1Q8IU57 520 aaPredicted RBP13.63□□□□□ -0.23
HDAC3-204ENST00000469207 SMG7Q92540 1137 aaKnown RBP13.63□□□□□ -0.23
HDAC3-204ENST00000469207 TRIM6Q9C030 488 aaPredicted RBP13.63□□□□□ -0.23
HDAC3-204ENST00000469207 POLR3FQ9H1D9 316 aaPredicted RBP13.63□□□□□ -0.23
HDAC3-204ENST00000469207 TMEM60Q9H2L4 133 aa13.63□□□□□ -0.23
HDAC3-204ENST00000469207 WDR6Q9NNW5 1121 aaKnown RBP13.63□□□□□ -0.23
HDAC3-204ENST00000469207 ANKEF1Q9NU02 776 aa13.63□□□□□ -0.23
HDAC3-204ENST00000469207 FBXL21Q9UKT6 434 aa13.63□□□□□ -0.23
HDAC3-204ENST00000469207 DUSP12Q9UNI6 340 aa13.63□□□□□ -0.23
HDAC3-204ENST00000469207 VPS13AQ96RL7 3174 aa13.63□□□□□ -0.23
HDAC3-204ENST00000469207 KRBA1A5PL33 1030 aa13.62□□□□□ -0.23
HDAC3-204ENST00000469207 PRR23AA6NEV1 266 aa13.62□□□□□ -0.23
HDAC3-204ENST00000469207 POTEMA6NI47 508 aa13.62□□□□□ -0.23
HDAC3-204ENST00000469207 STK25O00506 426 aa13.62□□□□□ -0.23
HDAC3-204ENST00000469207 USO1O60763 962 aaKnown RBP13.62□□□□□ -0.23
HDAC3-204ENST00000469207 DGAT1O75907 488 aa13.62□□□□□ -0.23
HDAC3-204ENST00000469207 LYPLA2O95372 231 aa13.62□□□□□ -0.23
HDAC3-204ENST00000469207 GLUD1P00367 558 aa13.62□□□□□ -0.23
HDAC3-204ENST00000469207 AOC1P19801 751 aa13.62□□□□□ -0.23
HDAC3-204ENST00000469207 NBL1P41271 181 aa13.62□□□□□ -0.23
HDAC3-204ENST00000469207 NCBP1Q09161 790 aaKnown RBP13.62□□□□□ -0.23
HDAC3-204ENST00000469207 TFDP1Q14186 410 aa13.62□□□□□ -0.23
HDAC3-204ENST00000469207 FUT10Q6P4F1 479 aa13.62□□□□□ -0.23
HDAC3-204ENST00000469207 SLC44A3Q8N4M1 653 aa13.62□□□□□ -0.23
HDAC3-204ENST00000469207 CMASQ8NFW8 434 aaPredicted RBP13.62□□□□□ -0.23
HDAC3-204ENST00000469207 HASPINQ8TF76 798 aa13.62□□□□□ -0.23
HDAC3-204ENST00000469207 RIN2Q8WYP3 895 aaPredicted RBP13.62□□□□□ -0.23
HDAC3-204ENST00000469207 MTMR9Q96QG7 549 aa13.62□□□□□ -0.23
HDAC3-204ENST00000469207 NAP1L4Q99733 375 aaKnown RBP13.62□□□□□ -0.23
HDAC3-204ENST00000469207 RPP25Q9BUL9 199 aaKnown RBP13.62□□□□□ -0.23
HDAC3-204ENST00000469207 COLEC11Q9BWP8 271 aa13.62□□□□□ -0.23
HDAC3-204ENST00000469207 NT5C3AQ9H0P0 336 aa13.62□□□□□ -0.23
HDAC3-204ENST00000469207 GIT1Q9Y2X7 761 aa13.62□□□□□ -0.23
HDAC3-204ENST00000469207 ARID2Q68CP9 1835 aa13.62□□□□□ -0.23
HDAC3-204ENST00000469207 A0A1B0GUA9 196 aa13.61□□□□□ -0.23
HDAC3-204ENST00000469207 SPATA31C1P0DKV0 1188 aa13.61□□□□□ -0.23
HDAC3-204ENST00000469207 GUCY1B3Q02153 619 aa13.61□□□□□ -0.23
HDAC3-204ENST00000469207 POU5F1BQ06416 359 aa13.61□□□□□ -0.23
HDAC3-204ENST00000469207 RTP2Q5QGT7 225 aa13.61□□□□□ -0.23
HDAC3-204ENST00000469207 SLC27A1Q6PCB7 646 aa13.61□□□□□ -0.23
HDAC3-204ENST00000469207 LILRA6Q6PI73 481 aa13.61□□□□□ -0.23
HDAC3-204ENST00000469207 SNX27Q96L92 541 aa13.61□□□□□ -0.23
HDAC3-204ENST00000469207 PIDD1Q9HB75 910 aa13.61□□□□□ -0.23
HDAC3-204ENST00000469207 STK39Q9UEW8 545 aa13.61□□□□□ -0.23
HDAC3-204ENST00000469207 ADAM28Q9UKQ2 775 aa13.61□□□□□ -0.23
HDAC3-204ENST00000469207 CA14Q9ULX7 337 aa13.61□□□□□ -0.23
HDAC3-204ENST00000469207 SSX2IPQ9Y2D8 614 aa13.61□□□□□ -0.23
HDAC3-204ENST00000469207 DOCK6Q96HP0 2047 aa13.61□□□□□ -0.23
HDAC3-204ENST00000469207 PTPRZ1P23471 2315 aaPredicted RBP13.61□□□□□ -0.23
HDAC3-204ENST00000469207 TDRD15B5MCY1 1934 aaKnown RBP13.6□□□□□ -0.23
HDAC3-204ENST00000469207 CASTOR2A6NHX0 329 aa13.6□□□□□ -0.23
HDAC3-204ENST00000469207 LRRIQ4A6NIV6 560 aa13.6□□□□□ -0.23
HDAC3-204ENST00000469207 MED24O75448 989 aa13.6□□□□□ -0.23
HDAC3-204ENST00000469207 NR1I2O75469 434 aa13.6□□□□□ -0.23
HDAC3-204ENST00000469207 TADA2AO75478 443 aa13.6□□□□□ -0.23
HDAC3-204ENST00000469207 EDN1P05305 212 aa13.6□□□□□ -0.23
HDAC3-204ENST00000469207 NTHL1P78549 312 aa13.6□□□□□ -0.23
HDAC3-204ENST00000469207 PCBP1Q15365 356 aaKnown RBP eCLIP13.6□□□□□ -0.23
HDAC3-204ENST00000469207 ANGPT1Q15389 498 aa13.6□□□□□ -0.23
HDAC3-204ENST00000469207 USP41Q3LFD5 358 aa13.6□□□□□ -0.23
HDAC3-204ENST00000469207 GET4Q7L5D6 327 aaPredicted RBP13.6□□□□□ -0.23
HDAC3-204ENST00000469207 CATSPER3Q86XQ3 398 aa13.6□□□□□ -0.23
HDAC3-204ENST00000469207 DIS3L2Q8IYB7 885 aaKnown RBP13.6□□□□□ -0.23
HDAC3-204ENST00000469207 DTWD2Q8NBA8 298 aa13.6□□□□□ -0.23
HDAC3-204ENST00000469207 NSUN7Q8NE18 718 aaKnown RBP13.6□□□□□ -0.23
HDAC3-204ENST00000469207 BSNDQ8WZ55 320 aa13.6□□□□□ -0.23
HDAC3-204ENST00000469207 GTF3C6Q969F1 213 aa13.6□□□□□ -0.23
HDAC3-204ENST00000469207 CCDC51Q96ER9 411 aa13.6□□□□□ -0.23
HDAC3-204ENST00000469207 SNTG2Q9NY99 539 aa13.6□□□□□ -0.23
HDAC3-204ENST00000469207 IGSF9Q9P2J2 1179 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms