RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 EURLQ9NYK6 297 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 ZMYND8Q9ULU4 1186 aaPredicted RBP10.63□□□□□ -0.71
NUP50-214ENST00000469163 GUCA1BQ9UMX6 200 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 USP20Q9Y2K6 914 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 ADGRG1Q9Y653 693 aa10.63□□□□□ -0.71
NUP50-214ENST00000469163 H0Y3Z8 333 aa10.62□□□□□ -0.71
NUP50-214ENST00000469163 IKBKBO14920 756 aa10.62□□□□□ -0.71
NUP50-214ENST00000469163 CD97P48960 835 aa10.62□□□□□ -0.71
NUP50-214ENST00000469163 TMED10P49755 219 aaKnown RBP10.62□□□□□ -0.71
NUP50-214ENST00000469163 GALK1P51570 392 aa10.62□□□□□ -0.71
NUP50-214ENST00000469163 ARHGAP4P98171 946 aa10.62□□□□□ -0.71
NUP50-214ENST00000469163 CNPY1Q3B7I2 92 aa10.62□□□□□ -0.71
NUP50-214ENST00000469163 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.62□□□□□ -0.71
NUP50-214ENST00000469163 HERC4Q5GLZ8 1057 aaPredicted RBP10.62□□□□□ -0.71
NUP50-214ENST00000469163 OTUD6AQ7L8S5 288 aa10.62□□□□□ -0.71
NUP50-214ENST00000469163 PLVAPQ9BX97 442 aa10.62□□□□□ -0.71
NUP50-214ENST00000469163 GINM1Q9NU53 330 aa10.62□□□□□ -0.71
NUP50-214ENST00000469163 TSKSQ9UJT2 592 aa10.62□□□□□ -0.71
NUP50-214ENST00000469163 LUC7L2Q9Y383 392 aaKnown RBP10.62□□□□□ -0.71
NUP50-214ENST00000469163 RIPK3Q9Y572 518 aa10.62□□□□□ -0.71
NUP50-214ENST00000469163 CACNA1SQ13698 1873 aa10.62□□□□□ -0.71
NUP50-214ENST00000469163 A0A1W2PQ67 120 aa10.62□□□□□ -0.71
NUP50-214ENST00000469163 HGSO14964 777 aaPredicted RBP10.62□□□□□ -0.71
NUP50-214ENST00000469163 ITGA2BP08514 1039 aa10.62□□□□□ -0.71
NUP50-214ENST00000469163 ZNF157P51786 506 aaPredicted RBP10.62□□□□□ -0.71
NUP50-214ENST00000469163 PAK2Q13177 524 aa10.62□□□□□ -0.71
NUP50-214ENST00000469163 CAMK2BQ13554 666 aa10.62□□□□□ -0.71
NUP50-214ENST00000469163 TREML2Q5T2D2 321 aa10.62□□□□□ -0.71
NUP50-214ENST00000469163 OR52E8Q6IFG1 317 aa10.62□□□□□ -0.71
NUP50-214ENST00000469163 PHLDB3Q6NSJ2 640 aa10.62□□□□□ -0.71
NUP50-214ENST00000469163 C15orf52Q6ZUT6 534 aaKnown RBP10.62□□□□□ -0.71
NUP50-214ENST00000469163 KSR1Q8IVT5 923 aa10.62□□□□□ -0.71
NUP50-214ENST00000469163 TC2NQ8N9U0 490 aa10.62□□□□□ -0.71
NUP50-214ENST00000469163 CCDC127Q96BQ5 260 aa10.62□□□□□ -0.71
NUP50-214ENST00000469163 CATSPER2Q96P56 530 aa10.62□□□□□ -0.71
NUP50-214ENST00000469163 MYO9BQ13459 2157 aa10.62□□□□□ -0.71
NUP50-214ENST00000469163 TTLL13PA6NNM8 815 aa10.62□□□□□ -0.71
NUP50-214ENST00000469163 LCA5LO95447 670 aa10.62□□□□□ -0.71
NUP50-214ENST00000469163 YEATS4O95619 227 aa10.62□□□□□ -0.71
NUP50-214ENST00000469163 EPB41P11171 864 aaKnown RBP10.62□□□□□ -0.71
NUP50-214ENST00000469163 IDO1P14902 403 aa10.62□□□□□ -0.71
NUP50-214ENST00000469163 C2orf54Q08AI8 447 aa10.62□□□□□ -0.71
NUP50-214ENST00000469163 RNF207Q6ZRF8 634 aa10.62□□□□□ -0.71
NUP50-214ENST00000469163 SESTD1Q86VW0 696 aa10.62□□□□□ -0.71
NUP50-214ENST00000469163 DNAJC9Q8WXX5 260 aa10.62□□□□□ -0.71
NUP50-214ENST00000469163 NUDT12Q9BQG2 462 aa10.62□□□□□ -0.71
NUP50-214ENST00000469163 ZNF577Q9BSK1 485 aa10.62□□□□□ -0.71
NUP50-214ENST00000469163 RAB34Q9BZG1 259 aa10.62□□□□□ -0.71
NUP50-214ENST00000469163 ADARB2Q9NS39 739 aaKnown RBP10.62□□□□□ -0.71
NUP50-214ENST00000469163 POLR3EQ9NVU0 708 aa10.62□□□□□ -0.71
NUP50-214ENST00000469163 ZNF148Q9UQR1 794 aa10.62□□□□□ -0.71
NUP50-214ENST00000469163 IRS2Q9Y4H2 1338 aa10.62□□□□□ -0.71
NUP50-214ENST00000469163 MYH3P11055 1940 aa10.61□□□□□ -0.71
NUP50-214ENST00000469163 TRIM49BA6NDI0 452 aa10.61□□□□□ -0.71
NUP50-214ENST00000469163 MGEA5O60502 916 aa10.61□□□□□ -0.71
NUP50-214ENST00000469163 PDE1BQ01064 536 aa10.61□□□□□ -0.71
NUP50-214ENST00000469163 CNTN2Q02246 1040 aa10.61□□□□□ -0.71
NUP50-214ENST00000469163 GABPAQ06546 454 aa10.61□□□□□ -0.71
NUP50-214ENST00000469163 C11orf74Q86VG3 221 aa10.61□□□□□ -0.71
NUP50-214ENST00000469163 MLKLQ8NB16 471 aa10.61□□□□□ -0.71
NUP50-214ENST00000469163 MPP4Q96JB8 637 aa10.61□□□□□ -0.71
NUP50-214ENST00000469163 MTUS1Q9ULD2 1270 aa10.61□□□□□ -0.71
NUP50-214ENST00000469163 ARIH1Q9Y4X5 557 aaPredicted RBP10.61□□□□□ -0.71
NUP50-214ENST00000469163 RPS6P62753 249 aaKnown RBP10.61□□□□□ -0.71
NUP50-214ENST00000469163 GJC2Q5T442 439 aaPredicted RBP10.61□□□□□ -0.71
NUP50-214ENST00000469163 KAZNQ674X7 775 aa10.61□□□□□ -0.71
NUP50-214ENST00000469163 ZC3H18Q86VM9 953 aaKnown RBP10.61□□□□□ -0.71
NUP50-214ENST00000469163 SIAH1Q8IUQ4 282 aa10.61□□□□□ -0.71
NUP50-214ENST00000469163 CDCA5Q96FF9 252 aa10.61□□□□□ -0.71
NUP50-214ENST00000469163 TAAR1Q96RJ0 339 aa10.61□□□□□ -0.71
NUP50-214ENST00000469163 DDX23Q9BUQ8 820 aaKnown RBP10.61□□□□□ -0.71
NUP50-214ENST00000469163 AS3MTQ9HBK9 375 aa10.61□□□□□ -0.71
NUP50-214ENST00000469163 HESX1Q9UBX0 185 aa10.61□□□□□ -0.71
NUP50-214ENST00000469163 MYPNQ86TC9 1320 aa10.61□□□□□ -0.71
NUP50-214ENST00000469163 LINC00854A0A1B0GVQ3 168 aa10.61□□□□□ -0.71
NUP50-214ENST00000469163 CCDC169A6NNP5 214 aa10.61□□□□□ -0.71
NUP50-214ENST00000469163 GEMIN4P57678 1058 aaKnown RBP10.61□□□□□ -0.71
NUP50-214ENST00000469163 KIF5AQ12840 1032 aa10.61□□□□□ -0.71
NUP50-214ENST00000469163 BPHLQ86WA6 291 aaPredicted RBP10.61□□□□□ -0.71
NUP50-214ENST00000469163 APOBEC3FQ8IUX4 373 aaKnown RBP10.61□□□□□ -0.71
NUP50-214ENST00000469163 AENQ8WTP8 325 aaKnown RBP10.61□□□□□ -0.71
NUP50-214ENST00000469163 GLG1Q92896 1179 aa10.61□□□□□ -0.71
NUP50-214ENST00000469163 PTPRN2Q92932 1015 aa10.61□□□□□ -0.71
NUP50-214ENST00000469163 NAP1L3Q99457 506 aaPredicted RBP10.61□□□□□ -0.71
NUP50-214ENST00000469163 NAA15Q9BXJ9 866 aaKnown RBP10.61□□□□□ -0.71
NUP50-214ENST00000469163 NRDE2Q9H7Z3 1164 aa10.61□□□□□ -0.71
NUP50-214ENST00000469163 ADAM22Q9P0K1 906 aa10.61□□□□□ -0.71
NUP50-214ENST00000469163 C6orf203Q9P0P8 240 aaPredicted RBP10.61□□□□□ -0.71
NUP50-214ENST00000469163 NFE2L3Q9Y4A8 694 aa10.61□□□□□ -0.71
NUP50-214ENST00000469163 TEX28O15482 410 aa10.6□□□□□ -0.71
NUP50-214ENST00000469163 MSL3P1P0C860 447 aa10.6□□□□□ -0.71
NUP50-214ENST00000469163 CMA1P23946 247 aa10.6□□□□□ -0.71
NUP50-214ENST00000469163 CCR3P51677 355 aa10.6□□□□□ -0.71
NUP50-214ENST00000469163 SPECC1LQ69YQ0 1117 aa10.6□□□□□ -0.71
NUP50-214ENST00000469163 RAD9BQ6WBX8 426 aa10.6□□□□□ -0.71
NUP50-214ENST00000469163 CACTIN-AS1Q8N1I8 211 aa10.6□□□□□ -0.71
NUP50-214ENST00000469163 CEP70Q8NHQ1 597 aa10.6□□□□□ -0.71
NUP50-214ENST00000469163 WDR11Q9BZH6 1224 aa10.6□□□□□ -0.71
NUP50-214ENST00000469163 BHMT2Q9H2M3 363 aa10.6□□□□□ -0.71
NUP50-214ENST00000469163 SAR1BQ9Y6B6 198 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms