RNA–Protein interactions for RNA: ENST00000468839.1

CRAMP1-206, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 451 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-206ENST00000468839 EHBP1Q8NDI1 1231 aa16.32■□□□□ 0.2
CRAMP1-206ENST00000468839 RAET1EQ8TD07 263 aa16.32■□□□□ 0.2
CRAMP1-206ENST00000468839 SYN2Q92777 582 aaPredicted RBP16.32■□□□□ 0.2
CRAMP1-206ENST00000468839 MSTO1Q9BUK6 570 aa16.32■□□□□ 0.2
CRAMP1-206ENST00000468839 MINDY3Q9H8M7 445 aa16.32■□□□□ 0.2
CRAMP1-206ENST00000468839 PTPRHQ9HD43 1115 aa16.32■□□□□ 0.2
CRAMP1-206ENST00000468839 MYO6Q9UM54 1294 aa16.32■□□□□ 0.2
CRAMP1-206ENST00000468839 TNFSF13BQ9Y275 285 aa16.32■□□□□ 0.2
CRAMP1-206ENST00000468839 TTLL13PA6NNM8 815 aa16.31■□□□□ 0.2
CRAMP1-206ENST00000468839 INO80B-WBP1J3KQ70 363 aa16.31■□□□□ 0.2
CRAMP1-206ENST00000468839 OGTO15294 1046 aa16.31■□□□□ 0.2
CRAMP1-206ENST00000468839 CCP110O43303 1012 aa16.31■□□□□ 0.2
CRAMP1-206ENST00000468839 VTNP04004 478 aa16.31■□□□□ 0.2
CRAMP1-206ENST00000468839 CYP2C9P11712 490 aa16.31■□□□□ 0.2
CRAMP1-206ENST00000468839 NLRP11P59045 1033 aaKnown RBP16.31■□□□□ 0.2
CRAMP1-206ENST00000468839 MYL7Q01449 175 aa16.31■□□□□ 0.2
CRAMP1-206ENST00000468839 CETN1Q12798 172 aa16.31■□□□□ 0.2
CRAMP1-206ENST00000468839 PRPF4BQ13523 1007 aaKnown RBP16.31■□□□□ 0.2
CRAMP1-206ENST00000468839 HIC1Q14526 733 aa16.31■□□□□ 0.2
CRAMP1-206ENST00000468839 MPZL3Q6UWV2 235 aa16.31■□□□□ 0.2
CRAMP1-206ENST00000468839 CACNA2D4Q7Z3S7 1137 aa16.31■□□□□ 0.2
CRAMP1-206ENST00000468839 CCAR2Q8N163 923 aaKnown RBP16.31■□□□□ 0.2
CRAMP1-206ENST00000468839 C17orf53Q8N3J3 647 aaPredicted RBP16.31■□□□□ 0.2
CRAMP1-206ENST00000468839 LMO3Q8TAP4 145 aa16.31■□□□□ 0.2
CRAMP1-206ENST00000468839 FAM213AQ9BRX8 229 aa16.31■□□□□ 0.2
CRAMP1-206ENST00000468839 INO80BQ9C086 356 aaPredicted RBP16.31■□□□□ 0.2
CRAMP1-206ENST00000468839 XPNPEP3Q9NQH7 507 aa16.31■□□□□ 0.2
CRAMP1-206ENST00000468839 ZNHIT6Q9NWK9 470 aaKnown RBP16.31■□□□□ 0.2
CRAMP1-206ENST00000468839 GCNT4Q9P109 453 aa16.31■□□□□ 0.2
CRAMP1-206ENST00000468839 HDAC6Q9UBN7 1215 aa16.31■□□□□ 0.2
CRAMP1-206ENST00000468839 COQ4Q9Y3A0 265 aa16.31■□□□□ 0.2
CRAMP1-206ENST00000468839 C17orf102A2RUQ5 167 aa16.3■□□□□ 0.2
CRAMP1-206ENST00000468839 LRRIQ3A6PVS8 624 aaPredicted RBP16.3■□□□□ 0.2
CRAMP1-206ENST00000468839 FAM189A1O60320 539 aa16.3■□□□□ 0.2
CRAMP1-206ENST00000468839 PGK1P00558 417 aa16.3■□□□□ 0.2
CRAMP1-206ENST00000468839 UCHL3P15374 230 aa16.3■□□□□ 0.2
CRAMP1-206ENST00000468839 POLR2FP61218 127 aaKnown RBP16.3■□□□□ 0.2
CRAMP1-206ENST00000468839 AMHR2Q16671 573 aa16.3■□□□□ 0.2
CRAMP1-206ENST00000468839 EPC2Q52LR7 807 aa16.3■□□□□ 0.2
CRAMP1-206ENST00000468839 ATF7IP2Q5U623 682 aa16.3■□□□□ 0.2
CRAMP1-206ENST00000468839 CCSAPQ6IQ19 270 aaPredicted RBP16.3■□□□□ 0.2
CRAMP1-206ENST00000468839 RAD9BQ6WBX8 426 aa16.3■□□□□ 0.2
CRAMP1-206ENST00000468839 RRAGAQ7L523 313 aa16.3■□□□□ 0.2
CRAMP1-206ENST00000468839 NME8Q8N427 588 aa16.3■□□□□ 0.2
CRAMP1-206ENST00000468839 SLAIN1Q8ND83 568 aa16.3■□□□□ 0.2
CRAMP1-206ENST00000468839 ZNF296Q8WUU4 475 aaPredicted RBP16.3■□□□□ 0.2
CRAMP1-206ENST00000468839 ZNF668Q96K58 619 aaPredicted RBP16.3■□□□□ 0.2
CRAMP1-206ENST00000468839 CHP1Q99653 195 aa16.3■□□□□ 0.2
CRAMP1-206ENST00000468839 TMEM117Q9H0C3 514 aa16.3■□□□□ 0.2
CRAMP1-206ENST00000468839 ADAMTS10Q9H324 1103 aa16.3■□□□□ 0.2
CRAMP1-206ENST00000468839 TMEM8AQ9HCN3 771 aa16.3■□□□□ 0.2
CRAMP1-206ENST00000468839 AIPL1Q9NZN9 384 aa16.3■□□□□ 0.2
CRAMP1-206ENST00000468839 PDCD11Q14690 1871 aaKnown RBP16.3■□□□□ 0.2
CRAMP1-206ENST00000468839 RALGAPA2Q2PPJ7 1873 aa16.3■□□□□ 0.2
CRAMP1-206ENST00000468839 CNTNAP2Q9UHC6 1331 aa16.29■□□□□ 0.2
CRAMP1-206ENST00000468839 SOWAHDA6NJG2 315 aa16.29■□□□□ 0.2
CRAMP1-206ENST00000468839 TREHO43280 583 aa16.29■□□□□ 0.2
CRAMP1-206ENST00000468839 GPR32O75388 356 aa16.29■□□□□ 0.2
CRAMP1-206ENST00000468839 IQCF3P0C7M6 154 aa16.29■□□□□ 0.2
CRAMP1-206ENST00000468839 ACTN1P12814 892 aa16.29■□□□□ 0.2
CRAMP1-206ENST00000468839 MATR3P43243 847 aaKnown RBP eCLIP16.29■□□□□ 0.2
CRAMP1-206ENST00000468839 GCLMP48507 274 aa16.29■□□□□ 0.2
CRAMP1-206ENST00000468839 ACOT2P49753 483 aa16.29■□□□□ 0.2
CRAMP1-206ENST00000468839 POU5F1Q01860 360 aaKnown RBP16.29■□□□□ 0.2
CRAMP1-206ENST00000468839 PCBP1Q15365 356 aaKnown RBP eCLIP16.29■□□□□ 0.2
CRAMP1-206ENST00000468839 KRT39Q6A163 491 aa16.29■□□□□ 0.2
CRAMP1-206ENST00000468839 TRIM65Q6PJ69 517 aa16.29■□□□□ 0.2
CRAMP1-206ENST00000468839 CCDC170Q8IYT3 715 aa16.29■□□□□ 0.2
CRAMP1-206ENST00000468839 C7orf31Q8N865 590 aa16.29■□□□□ 0.2
CRAMP1-206ENST00000468839 PCSK9Q8NBP7 692 aaKnown RBP16.29■□□□□ 0.2
CRAMP1-206ENST00000468839 NLRP7Q8WX94 980 aa16.29■□□□□ 0.2
CRAMP1-206ENST00000468839 VTI1AQ96AJ9 217 aa16.29■□□□□ 0.2
CRAMP1-206ENST00000468839 INTS2Q9H0H0 1204 aaKnown RBP16.29■□□□□ 0.2
CRAMP1-206ENST00000468839 NLRC4Q9NPP4 1024 aa16.29■□□□□ 0.2
CRAMP1-206ENST00000468839 ANKFY1Q9P2R3 1169 aa16.29■□□□□ 0.2
CRAMP1-206ENST00000468839 DDX20Q9UHI6 824 aaKnown RBP16.29■□□□□ 0.2
CRAMP1-206ENST00000468839 LRRC53A6NM62 1247 aa16.28■□□□□ 0.2
CRAMP1-206ENST00000468839 ZSCAN12O43309 604 aa16.28■□□□□ 0.2
CRAMP1-206ENST00000468839 RFX1P22670 979 aa16.28■□□□□ 0.2
CRAMP1-206ENST00000468839 MXI1P50539 228 aa16.28■□□□□ 0.2
CRAMP1-206ENST00000468839 CHMP4BP1P59074 171 aa16.28■□□□□ 0.2
CRAMP1-206ENST00000468839 SURF1Q15526 300 aa16.28■□□□□ 0.2
CRAMP1-206ENST00000468839 KCNA10Q16322 511 aa16.28■□□□□ 0.2
CRAMP1-206ENST00000468839 SFMBT2Q5VUG0 894 aa16.28■□□□□ 0.2
CRAMP1-206ENST00000468839 RUFY4Q6ZNE9 571 aa16.28■□□□□ 0.2
CRAMP1-206ENST00000468839 C15orf39Q6ZRI6 1047 aa16.28■□□□□ 0.2
CRAMP1-206ENST00000468839 SESTD1Q86VW0 696 aa16.28■□□□□ 0.2
CRAMP1-206ENST00000468839 BRSK2Q8IWQ3 736 aa16.28■□□□□ 0.2
CRAMP1-206ENST00000468839 CCDC127Q96BQ5 260 aa16.28■□□□□ 0.2
CRAMP1-206ENST00000468839 TCHPQ9BT92 498 aa16.28■□□□□ 0.2
CRAMP1-206ENST00000468839 GCOM2Q9BZD3 368 aaPredicted RBP16.28■□□□□ 0.2
CRAMP1-206ENST00000468839 CPSF3Q9UKF6 684 aaKnown RBP16.28■□□□□ 0.2
CRAMP1-206ENST00000468839 EPN1Q9Y6I3 576 aaPredicted RBP16.28■□□□□ 0.2
CRAMP1-206ENST00000468839 B4GALT5O43286 388 aa16.27■□□□□ 0.2
CRAMP1-206ENST00000468839 C4BPAP04003 597 aaKnown RBP16.27■□□□□ 0.2
CRAMP1-206ENST00000468839 ASGR1P07306 291 aa16.27■□□□□ 0.2
CRAMP1-206ENST00000468839 MCF2P10911 925 aa16.27■□□□□ 0.2
CRAMP1-206ENST00000468839 JAM2P57087 298 aa16.27■□□□□ 0.2
CRAMP1-206ENST00000468839 ZNF200P98182 395 aaPredicted RBP16.27■□□□□ 0.2
CRAMP1-206ENST00000468839 APBA1Q02410 837 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms