RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 PPP6R2O75170 966 aa16.69■□□□□ 0.26
ATG4B-215ENST00000468018 GLP2RO95838 553 aa16.69■□□□□ 0.26
ATG4B-215ENST00000468018 F13A1P00488 732 aa16.69■□□□□ 0.26
ATG4B-215ENST00000468018 POMCP01189 267 aa16.69■□□□□ 0.26
ATG4B-215ENST00000468018 ZSCAN22P10073 491 aaPredicted RBP16.69■□□□□ 0.26
ATG4B-215ENST00000468018 KCNA5P22460 613 aa16.69■□□□□ 0.26
ATG4B-215ENST00000468018 AKAP5P24588 427 aa16.69■□□□□ 0.26
ATG4B-215ENST00000468018 DDIT3P35638 169 aa16.69■□□□□ 0.26
ATG4B-215ENST00000468018 SCNN1GP51170 649 aa16.69■□□□□ 0.26
ATG4B-215ENST00000468018 NCKAP1LP55160 1127 aa16.69■□□□□ 0.26
ATG4B-215ENST00000468018 CEBPZQ03701 1054 aaKnown RBP16.69■□□□□ 0.26
ATG4B-215ENST00000468018 KRT17Q04695 432 aa16.69■□□□□ 0.26
ATG4B-215ENST00000468018 PKP1Q13835 747 aa16.69■□□□□ 0.26
ATG4B-215ENST00000468018 DUSP6Q16828 381 aa16.69■□□□□ 0.26
ATG4B-215ENST00000468018 DCAF4L1Q3SXM0 396 aa16.69■□□□□ 0.26
ATG4B-215ENST00000468018 ATF7IP2Q5U623 682 aa16.69■□□□□ 0.26
ATG4B-215ENST00000468018 DDX53Q86TM3 631 aaKnown RBP16.69■□□□□ 0.26
ATG4B-215ENST00000468018 HACE1Q8IYU2 909 aa16.69■□□□□ 0.26
ATG4B-215ENST00000468018 RNF168Q8IYW5 571 aaPredicted RBP16.69■□□□□ 0.26
ATG4B-215ENST00000468018 PPP2R3CQ969Q6 453 aa16.69■□□□□ 0.26
ATG4B-215ENST00000468018 TMEM169Q96HH4 297 aa16.69■□□□□ 0.26
ATG4B-215ENST00000468018 FIZ1Q96SL8 496 aa16.69■□□□□ 0.26
ATG4B-215ENST00000468018 ACO2Q99798 780 aaKnown RBP16.69■□□□□ 0.26
ATG4B-215ENST00000468018 REEP2Q9BRK0 252 aa16.69■□□□□ 0.26
ATG4B-215ENST00000468018 MARCH5Q9NX47 278 aa16.69■□□□□ 0.26
ATG4B-215ENST00000468018 CLDND1Q9NY35 253 aa16.69■□□□□ 0.26
ATG4B-215ENST00000468018 KCNG1Q9UIX4 513 aa16.69■□□□□ 0.26
ATG4B-215ENST00000468018 MTCL1Q9Y4B5 1905 aaKnown RBP16.68■□□□□ 0.26
ATG4B-215ENST00000468018 HIDE1A8MVS5 230 aa16.68■□□□□ 0.26
ATG4B-215ENST00000468018 NRP1O14786 923 aa16.68■□□□□ 0.26
ATG4B-215ENST00000468018 LINC01565O15544 149 aa16.68■□□□□ 0.26
ATG4B-215ENST00000468018 CSPG5O95196 566 aa16.68■□□□□ 0.26
ATG4B-215ENST00000468018 BRD1O95696 1058 aa16.68■□□□□ 0.26
ATG4B-215ENST00000468018 SSBP05455 408 aaKnown RBP eCLIP16.68■□□□□ 0.26
ATG4B-215ENST00000468018 MAPTP10636 758 aaKnown RBP16.68■□□□□ 0.26
ATG4B-215ENST00000468018 RNASELQ05823 741 aaKnown RBP16.68■□□□□ 0.26
ATG4B-215ENST00000468018 RAD51AP2Q09MP3 1159 aa16.68■□□□□ 0.26
ATG4B-215ENST00000468018 GRIK3Q13003 919 aa16.68■□□□□ 0.26
ATG4B-215ENST00000468018 GIT2Q14161 759 aa16.68■□□□□ 0.26
ATG4B-215ENST00000468018 MCM6Q14566 821 aa16.68■□□□□ 0.26
ATG4B-215ENST00000468018 NAB2Q15742 525 aa16.68■□□□□ 0.26
ATG4B-215ENST00000468018 TMEM184AQ6ZMB5 413 aa16.68■□□□□ 0.26
ATG4B-215ENST00000468018 GPBP1Q86WP2 473 aa16.68■□□□□ 0.26
ATG4B-215ENST00000468018 KRI1Q8N9T8 703 aaKnown RBP16.68■□□□□ 0.26
ATG4B-215ENST00000468018 ADAMTS19Q8TE59 1207 aa16.68■□□□□ 0.26
ATG4B-215ENST00000468018 MSLNLQ96KJ4 702 aa16.68■□□□□ 0.26
ATG4B-215ENST00000468018 CDCA3Q99618 268 aaPredicted RBP16.68■□□□□ 0.26
ATG4B-215ENST00000468018 TCF25Q9BQ70 676 aa16.68■□□□□ 0.26
ATG4B-215ENST00000468018 ADPGKQ9BRR6 497 aa16.68■□□□□ 0.26
ATG4B-215ENST00000468018 APOL6Q9BWW8 343 aa16.68■□□□□ 0.26
ATG4B-215ENST00000468018 SNTG2Q9NY99 539 aa16.68■□□□□ 0.26
ATG4B-215ENST00000468018 CLEC1BQ9P126 229 aa16.68■□□□□ 0.26
ATG4B-215ENST00000468018 STK17AQ9UEE5 414 aa16.68■□□□□ 0.26
ATG4B-215ENST00000468018 ANK1P16157 1881 aa16.67■□□□□ 0.26
ATG4B-215ENST00000468018 FSD2A1L4K1 749 aa16.67■□□□□ 0.26
ATG4B-215ENST00000468018 PTGESO14684 152 aa16.67■□□□□ 0.26
ATG4B-215ENST00000468018 SLC16A4O15374 487 aa16.67■□□□□ 0.26
ATG4B-215ENST00000468018 RECQL4O94761 1208 aa16.67■□□□□ 0.26
ATG4B-215ENST00000468018 YEATS4O95619 227 aa16.67■□□□□ 0.26
ATG4B-215ENST00000468018 ALDH2P05091 517 aa16.67■□□□□ 0.26
ATG4B-215ENST00000468018 CTSAP10619 480 aa16.67■□□□□ 0.26
ATG4B-215ENST00000468018 NRIP1P48552 1158 aa16.67■□□□□ 0.26
ATG4B-215ENST00000468018 CACNB1Q02641 598 aaPredicted RBP16.67■□□□□ 0.26
ATG4B-215ENST00000468018 PLPP4Q5VZY2 271 aa16.67■□□□□ 0.26
ATG4B-215ENST00000468018 MRPL43Q8N983 215 aaKnown RBP16.67■□□□□ 0.26
ATG4B-215ENST00000468018 VN1R2Q8NFZ6 395 aa16.67■□□□□ 0.26
ATG4B-215ENST00000468018 MRPL4Q9BYD3 311 aaKnown RBP16.67■□□□□ 0.26
ATG4B-215ENST00000468018 GBP3Q9H0R5 595 aa16.67■□□□□ 0.26
ATG4B-215ENST00000468018 CXCL16Q9H2A7 254 aa16.67■□□□□ 0.26
ATG4B-215ENST00000468018 LARSQ9P2J5 1176 aaKnown RBP16.67■□□□□ 0.26
ATG4B-215ENST00000468018 PLXNA3P51805 1871 aa16.67■□□□□ 0.26
ATG4B-215ENST00000468018 A0A087X0B3 334 aa16.66■□□□□ 0.26
ATG4B-215ENST00000468018 GRXCR2A6NFK2 248 aa16.66■□□□□ 0.26
ATG4B-215ENST00000468018 C2orf71A6NGG8 1288 aa16.66■□□□□ 0.26
ATG4B-215ENST00000468018 H3BQ06 376 aaPredicted RBP16.66■□□□□ 0.26
ATG4B-215ENST00000468018 SPTLC2O15270 562 aa16.66■□□□□ 0.26
ATG4B-215ENST00000468018 LILRB3O75022 631 aa16.66■□□□□ 0.26
ATG4B-215ENST00000468018 HSP90AA1P07900 732 aaKnown RBP16.66■□□□□ 0.26
ATG4B-215ENST00000468018 LIG1P18858 919 aa16.66■□□□□ 0.26
ATG4B-215ENST00000468018 SMC1AQ14683 1233 aaKnown RBP16.66■□□□□ 0.26
ATG4B-215ENST00000468018 PUS10Q3MIT2 529 aaKnown RBP16.66■□□□□ 0.26
ATG4B-215ENST00000468018 XKR4Q5GH76 650 aa16.66■□□□□ 0.26
ATG4B-215ENST00000468018 VPS52Q8N1B4 723 aa16.66■□□□□ 0.26
ATG4B-215ENST00000468018 MICAL1Q8TDZ2 1067 aa16.66■□□□□ 0.26
ATG4B-215ENST00000468018 ZNF396Q96N95 335 aaPredicted RBP16.66■□□□□ 0.26
ATG4B-215ENST00000468018 FAM193BQ96PV7 902 aaPredicted RBP16.66■□□□□ 0.26
ATG4B-215ENST00000468018 TARS2Q9BW92 718 aaKnown RBP16.66■□□□□ 0.26
ATG4B-215ENST00000468018 CDT1Q9H211 546 aa16.66■□□□□ 0.26
ATG4B-215ENST00000468018 TLE6Q9H808 572 aa16.66■□□□□ 0.26
ATG4B-215ENST00000468018 ENTPD7Q9NQZ7 604 aa16.66■□□□□ 0.26
ATG4B-215ENST00000468018 KLK14Q9P0G3 267 aa16.66■□□□□ 0.26
ATG4B-215ENST00000468018 STK39Q9UEW8 545 aa16.66■□□□□ 0.26
ATG4B-215ENST00000468018 CCDC39Q9UFE4 941 aa16.66■□□□□ 0.26
ATG4B-215ENST00000468018 FAN1Q9Y2M0 1017 aa16.66■□□□□ 0.26
ATG4B-215ENST00000468018 PER2O15055 1255 aa16.65■□□□□ 0.26
ATG4B-215ENST00000468018 IL9P15248 144 aa16.65■□□□□ 0.26
ATG4B-215ENST00000468018 SCP2P22307 547 aa16.65■□□□□ 0.26
ATG4B-215ENST00000468018 SMTNP53814 917 aa16.65■□□□□ 0.26
ATG4B-215ENST00000468018 COASYQ13057 564 aa16.65■□□□□ 0.26
ATG4B-215ENST00000468018 STK38Q15208 465 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms