RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 BRDTQ58F21 947 aaPredicted RBP12.34□□□□□ -0.43
HPS1-208ENST00000467246 GADL1Q6ZQY3 521 aa12.34□□□□□ -0.43
HPS1-208ENST00000467246 SLC47A2Q86VL8 602 aa12.34□□□□□ -0.43
HPS1-208ENST00000467246 NCAPG2Q86XI2 1143 aa12.34□□□□□ -0.43
HPS1-208ENST00000467246 ACTRT1Q8TDG2 376 aa12.34□□□□□ -0.43
HPS1-208ENST00000467246 HELQQ8TDG4 1101 aa12.34□□□□□ -0.43
HPS1-208ENST00000467246 SCFD2Q8WU76 684 aa12.34□□□□□ -0.43
HPS1-208ENST00000467246 IFT81Q8WYA0 676 aa12.34□□□□□ -0.43
HPS1-208ENST00000467246 GDF3Q9NR23 364 aa12.34□□□□□ -0.43
HPS1-208ENST00000467246 COQ4Q9Y3A0 265 aa12.34□□□□□ -0.43
HPS1-208ENST00000467246 SOWAHBA6NEL2 793 aa12.34□□□□□ -0.43
HPS1-208ENST00000467246 ATG7O95352 703 aa12.34□□□□□ -0.43
HPS1-208ENST00000467246 EEPD1Q7L9B9 569 aa12.34□□□□□ -0.43
HPS1-208ENST00000467246 IFT20Q8IY31 132 aa12.34□□□□□ -0.43
HPS1-208ENST00000467246 GPD1LQ8N335 351 aa12.34□□□□□ -0.43
HPS1-208ENST00000467246 FBXL13Q8NEE6 735 aa12.34□□□□□ -0.43
HPS1-208ENST00000467246 FAM71BQ8TC56 605 aa12.34□□□□□ -0.43
HPS1-208ENST00000467246 TMC2Q8TDI7 906 aa12.34□□□□□ -0.43
HPS1-208ENST00000467246 TATDN2Q93075 761 aa12.34□□□□□ -0.43
HPS1-208ENST00000467246 PAGR1Q9BTK6 254 aa12.34□□□□□ -0.43
HPS1-208ENST00000467246 ELP3Q9H9T3 547 aa12.34□□□□□ -0.43
HPS1-208ENST00000467246 MED4Q9NPJ6 270 aa12.34□□□□□ -0.43
HPS1-208ENST00000467246 RAB20Q9NX57 234 aa12.34□□□□□ -0.43
HPS1-208ENST00000467246 NOCTQ9UK39 431 aaKnown RBP12.34□□□□□ -0.43
HPS1-208ENST00000467246 AMFRQ9UKV5 643 aa12.34□□□□□ -0.43
HPS1-208ENST00000467246 NFU1Q9UMS0 254 aa12.34□□□□□ -0.43
HPS1-208ENST00000467246 NOC2LQ9Y3T9 749 aaKnown RBP12.34□□□□□ -0.43
HPS1-208ENST00000467246 CSADQ9Y600 493 aa12.34□□□□□ -0.43
HPS1-208ENST00000467246 OATP04181 439 aa12.33□□□□□ -0.44
HPS1-208ENST00000467246 UBA1P22314 1058 aaKnown RBP12.33□□□□□ -0.44
HPS1-208ENST00000467246 GPC3P51654 580 aa12.33□□□□□ -0.44
HPS1-208ENST00000467246 EPHB4P54760 987 aa12.33□□□□□ -0.44
HPS1-208ENST00000467246 MOB2Q70IA6 237 aa12.33□□□□□ -0.44
HPS1-208ENST00000467246 RIOX2Q8IUF8 465 aa12.33□□□□□ -0.44
HPS1-208ENST00000467246 SULF1Q8IWU6 871 aa12.33□□□□□ -0.44
HPS1-208ENST00000467246 ASAP3Q8TDY4 903 aa12.33□□□□□ -0.44
HPS1-208ENST00000467246 SHC3Q92529 594 aa12.33□□□□□ -0.44
HPS1-208ENST00000467246 DHX38Q92620 1227 aaKnown RBP12.33□□□□□ -0.44
HPS1-208ENST00000467246 DCPSQ96C86 337 aaKnown RBP12.33□□□□□ -0.44
HPS1-208ENST00000467246 OTUD5Q96G74 571 aa12.33□□□□□ -0.44
HPS1-208ENST00000467246 CLMNQ96JQ2 1002 aa12.33□□□□□ -0.44
HPS1-208ENST00000467246 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.33□□□□□ -0.445e-7■■□□□ 13.4
HPS1-208ENST00000467246 PI4K2AQ9BTU6 479 aa12.33□□□□□ -0.44
HPS1-208ENST00000467246 ISCUQ9H1K1 167 aa12.33□□□□□ -0.44
HPS1-208ENST00000467246 ARID2Q68CP9 1835 aa12.33□□□□□ -0.44
HPS1-208ENST00000467246 WDR90Q96KV7 1748 aa12.33□□□□□ -0.44
HPS1-208ENST00000467246 PGRMC1O00264 195 aaKnown RBP12.33□□□□□ -0.44
HPS1-208ENST00000467246 FAM153BP0C7A2 387 aa12.33□□□□□ -0.44
HPS1-208ENST00000467246 ITGA4P13612 1032 aa12.33□□□□□ -0.44
HPS1-208ENST00000467246 GLRA2P23416 452 aa12.33□□□□□ -0.44
HPS1-208ENST00000467246 TNFRSF8P28908 595 aa12.33□□□□□ -0.44
HPS1-208ENST00000467246 MFAP3P55082 362 aa12.33□□□□□ -0.44
HPS1-208ENST00000467246 TNNC1P63316 161 aa12.33□□□□□ -0.44
HPS1-208ENST00000467246 FAM153CQ494X1 144 aa12.33□□□□□ -0.44
HPS1-208ENST00000467246 LMBRD2Q68DH5 695 aaPredicted RBP12.33□□□□□ -0.44
HPS1-208ENST00000467246 TSEN2Q8NCE0 465 aaKnown RBP12.33□□□□□ -0.44
HPS1-208ENST00000467246 CASKIN2Q8WXE0 1202 aa12.33□□□□□ -0.44
HPS1-208ENST00000467246 VTI1AQ96AJ9 217 aa12.33□□□□□ -0.44
HPS1-208ENST00000467246 PCYT2Q99447 389 aa12.33□□□□□ -0.44
HPS1-208ENST00000467246 SPATC1LQ9H0A9 340 aa12.33□□□□□ -0.44
HPS1-208ENST00000467246 ADARB2Q9NS39 739 aaKnown RBP12.33□□□□□ -0.44
HPS1-208ENST00000467246 FAM153AQ9UHL3 310 aa12.33□□□□□ -0.44
HPS1-208ENST00000467246 GSTTP1A0A1W2PQM5 241 aa12.32□□□□□ -0.44
HPS1-208ENST00000467246 DDX3YO15523 660 aaKnown RBP12.32□□□□□ -0.44
HPS1-208ENST00000467246 RNF40O75150 1001 aa12.32□□□□□ -0.44
HPS1-208ENST00000467246 MMEP08473 750 aa12.32□□□□□ -0.44
HPS1-208ENST00000467246 GARTP22102 1010 aa12.32□□□□□ -0.44
HPS1-208ENST00000467246 LIG4P49917 911 aa12.32□□□□□ -0.44
HPS1-208ENST00000467246 WNT7BP56706 349 aa12.32□□□□□ -0.44
HPS1-208ENST00000467246 DCAF12L1Q5VU92 463 aa12.32□□□□□ -0.44
HPS1-208ENST00000467246 RASGEF1CQ8N431 466 aa12.32□□□□□ -0.44
HPS1-208ENST00000467246 ZNF516Q92618 1163 aa12.32□□□□□ -0.44
HPS1-208ENST00000467246 HAPLN2Q9GZV7 340 aa12.32□□□□□ -0.44
HPS1-208ENST00000467246 DDX47Q9H0S4 455 aaKnown RBP12.32□□□□□ -0.44
HPS1-208ENST00000467246 DHX33Q9H6R0 707 aaKnown RBP12.32□□□□□ -0.44
HPS1-208ENST00000467246 MYH9P35579 1960 aaKnown RBP12.32□□□□□ -0.44
HPS1-208ENST00000467246 GOLGA6BA6NDN3 693 aa12.32□□□□□ -0.44
HPS1-208ENST00000467246 KRIT1O00522 736 aa12.32□□□□□ -0.44
HPS1-208ENST00000467246 FARP2O94887 1054 aaPredicted RBP12.32□□□□□ -0.44
HPS1-208ENST00000467246 CALCAP01258 141 aa12.32□□□□□ -0.44
HPS1-208ENST00000467246 ACOT2P49753 483 aa12.32□□□□□ -0.44
HPS1-208ENST00000467246 EMBQ6PCB8 327 aa12.32□□□□□ -0.44
HPS1-208ENST00000467246 FOXR1Q6PIV2 292 aa12.32□□□□□ -0.44
HPS1-208ENST00000467246 ZBTB45Q96K62 511 aaPredicted RBP12.32□□□□□ -0.44
HPS1-208ENST00000467246 NT5C1BQ96P26 610 aa12.32□□□□□ -0.44
HPS1-208ENST00000467246 CEP89Q96ST8 783 aa12.32□□□□□ -0.44
HPS1-208ENST00000467246 MAF1Q9H063 256 aa12.32□□□□□ -0.44
HPS1-208ENST00000467246 PORCNQ9H237 461 aa12.32□□□□□ -0.44
HPS1-208ENST00000467246 CTTNBP2NLQ9P2B4 639 aa12.32□□□□□ -0.44
HPS1-208ENST00000467246 IGKV6D-21A0A0A0MT36 114 aa12.31□□□□□ -0.44
HPS1-208ENST00000467246 LRRIQ4A6NIV6 560 aa12.31□□□□□ -0.44
HPS1-208ENST00000467246 ZNF233A6NK53 670 aa12.31□□□□□ -0.44
HPS1-208ENST00000467246 SART1O43290 800 aaKnown RBP12.31□□□□□ -0.44
HPS1-208ENST00000467246 ATMINO43313 823 aaPredicted RBP12.31□□□□□ -0.44
HPS1-208ENST00000467246 CYP11B1P15538 503 aa12.31□□□□□ -0.44
HPS1-208ENST00000467246 NLRP11P59045 1033 aaKnown RBP12.31□□□□□ -0.44
HPS1-208ENST00000467246 FMO1Q01740 532 aa12.31□□□□□ -0.44
HPS1-208ENST00000467246 EXOC4Q96A65 974 aa12.31□□□□□ -0.44
HPS1-208ENST00000467246 FBXO40Q9UH90 709 aa12.31□□□□□ -0.44
HPS1-208ENST00000467246 RTN2O75298 545 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms