RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 THNSL2Q86YJ6 484 aa4.37□□□□□ -1.71
GTF3C3-209ENST00000466862 SNX33Q8WV41 574 aa4.37□□□□□ -1.71
GTF3C3-209ENST00000466862 ADAM2Q99965 735 aa4.37□□□□□ -1.71
GTF3C3-209ENST00000466862 TEX101Q9BY14 249 aa4.37□□□□□ -1.71
GTF3C3-209ENST00000466862 ANO3Q9BYT9 981 aa4.37□□□□□ -1.71
GTF3C3-209ENST00000466862 SYBUQ9NX95 663 aa4.37□□□□□ -1.71
GTF3C3-209ENST00000466862 EIF2B4Q9UI10 523 aaKnown RBP4.37□□□□□ -1.71
GTF3C3-209ENST00000466862 PACSIN3Q9UKS6 424 aa4.37□□□□□ -1.71
GTF3C3-209ENST00000466862 GAGE12BA1L429 117 aa4.36□□□□□ -1.71
GTF3C3-209ENST00000466862 GAGE12HA6NDE8 117 aa4.36□□□□□ -1.71
GTF3C3-209ENST00000466862 B5MCH6 92 aa4.36□□□□□ -1.71
GTF3C3-209ENST00000466862 WNT10BO00744 389 aa4.36□□□□□ -1.71
GTF3C3-209ENST00000466862 ADCY6O43306 1168 aa4.36□□□□□ -1.71
GTF3C3-209ENST00000466862 PRAMEF4O60810 478 aa4.36□□□□□ -1.71
GTF3C3-209ENST00000466862 LAG3P18627 525 aa4.36□□□□□ -1.71
GTF3C3-209ENST00000466862 BMP5P22003 454 aa4.36□□□□□ -1.71
GTF3C3-209ENST00000466862 XPAP23025 273 aaPredicted RBP4.36□□□□□ -1.71
GTF3C3-209ENST00000466862 CTSSP25774 331 aa4.36□□□□□ -1.71
GTF3C3-209ENST00000466862 ZEB1P37275 1124 aaPredicted RBP4.36□□□□□ -1.71
GTF3C3-209ENST00000466862 PTPAQ15257 358 aa4.36□□□□□ -1.71
GTF3C3-209ENST00000466862 DHCR24Q15392 516 aa4.36□□□□□ -1.71
GTF3C3-209ENST00000466862 TIGD2Q4W5G0 525 aa4.36□□□□□ -1.71
GTF3C3-209ENST00000466862 PRAMEF14Q5SWL7 426 aa4.36□□□□□ -1.71
GTF3C3-209ENST00000466862 RASSF3Q86WH2 238 aa4.36□□□□□ -1.71
GTF3C3-209ENST00000466862 ARHGEF19Q8IW93 802 aa4.36□□□□□ -1.71
GTF3C3-209ENST00000466862 CLRN3Q8NCR9 226 aa4.36□□□□□ -1.71
GTF3C3-209ENST00000466862 OR10H5Q8NGA6 315 aa4.36□□□□□ -1.71
GTF3C3-209ENST00000466862 NTN5Q8WTR8 489 aaPredicted RBP4.36□□□□□ -1.71
GTF3C3-209ENST00000466862 CRAMP1Q96RY5 1269 aa4.36□□□□□ -1.71
GTF3C3-209ENST00000466862 DCLRE1CQ96SD1 692 aaKnown RBP4.36□□□□□ -1.71
GTF3C3-209ENST00000466862 TOR3AQ9H497 397 aa4.36□□□□□ -1.71
GTF3C3-209ENST00000466862 SYNPO2LQ9H987 977 aa4.36□□□□□ -1.71
GTF3C3-209ENST00000466862 AKIP1Q9NQ31 210 aa4.36□□□□□ -1.71
GTF3C3-209ENST00000466862 GPRC5DQ9NZD1 345 aa4.36□□□□□ -1.71
GTF3C3-209ENST00000466862 TRPM5Q9NZQ8 1165 aa4.36□□□□□ -1.71
GTF3C3-209ENST00000466862 MAPRE3Q9UPY8 281 aa4.36□□□□□ -1.71
GTF3C3-209ENST00000466862 ZNF185O15231 689 aa4.35□□□□□ -1.71
GTF3C3-209ENST00000466862 B3GALT2O43825 422 aa4.35□□□□□ -1.71
GTF3C3-209ENST00000466862 RHOBTB3O94955 611 aa4.35□□□□□ -1.71
GTF3C3-209ENST00000466862 LPLP06858 475 aa4.35□□□□□ -1.71
GTF3C3-209ENST00000466862 ID4P47928 161 aa4.35□□□□□ -1.71
GTF3C3-209ENST00000466862 LGALS4P56470 323 aa4.35□□□□□ -1.71
GTF3C3-209ENST00000466862 RNASE9P60153 205 aaKnown RBP4.35□□□□□ -1.71
GTF3C3-209ENST00000466862 APBA1Q02410 837 aa4.35□□□□□ -1.71
GTF3C3-209ENST00000466862 NHLH2Q02577 135 aa4.35□□□□□ -1.71
GTF3C3-209ENST00000466862 FSCN1Q16658 493 aaKnown RBP4.35□□□□□ -1.71
GTF3C3-209ENST00000466862 MFSD14BQ5SR56 506 aa4.35□□□□□ -1.71
GTF3C3-209ENST00000466862 FAM102AQ5T9C2 384 aaPredicted RBP4.35□□□□□ -1.71
GTF3C3-209ENST00000466862 C11orf74Q86VG3 221 aa4.35□□□□□ -1.71
GTF3C3-209ENST00000466862 PLXDC1Q8IUK5 500 aa4.35□□□□□ -1.71
GTF3C3-209ENST00000466862 TSPEARQ8WU66 669 aa4.35□□□□□ -1.71
GTF3C3-209ENST00000466862 ZNF480Q8WV37 535 aa4.35□□□□□ -1.71
GTF3C3-209ENST00000466862 HOXB13Q92826 284 aaPredicted RBP4.35□□□□□ -1.71
GTF3C3-209ENST00000466862 VOPP1Q96AW1 172 aa4.35□□□□□ -1.71
GTF3C3-209ENST00000466862 BBC3Q96PG8 261 aaPredicted RBP4.35□□□□□ -1.71
GTF3C3-209ENST00000466862 SERHL2Q9H4I8 314 aa4.35□□□□□ -1.71
GTF3C3-209ENST00000466862 ALG13Q9NP73 1137 aaKnown RBP4.35□□□□□ -1.71
GTF3C3-209ENST00000466862 TOPORSQ9NS56 1045 aaPredicted RBP4.35□□□□□ -1.71
GTF3C3-209ENST00000466862 SCOCQ9UIL1 159 aa4.35□□□□□ -1.71
GTF3C3-209ENST00000466862 CLCA2Q9UQC9 943 aa4.35□□□□□ -1.71
GTF3C3-209ENST00000466862 TBX22Q9Y458 520 aa4.35□□□□□ -1.71
GTF3C3-209ENST00000466862 PRR5-ARHGAP8B1AHC4 643 aa4.34□□□□□ -1.71
GTF3C3-209ENST00000466862 DIRC3C9JPN6 131 aa4.34□□□□□ -1.71
GTF3C3-209ENST00000466862 RNASET2O00584 256 aaKnown RBP4.34□□□□□ -1.71
GTF3C3-209ENST00000466862 NEMP1O14524 444 aa4.34□□□□□ -1.71
GTF3C3-209ENST00000466862 CRHR1P34998 444 aa4.34□□□□□ -1.71
GTF3C3-209ENST00000466862 BMPR1AP36894 532 aa4.34□□□□□ -1.71
GTF3C3-209ENST00000466862 CLK3P49761 638 aaKnown RBP4.34□□□□□ -1.71
GTF3C3-209ENST00000466862 FLT3LGP49771 235 aa4.34□□□□□ -1.71
GTF3C3-209ENST00000466862 SCAPQ12770 1279 aa4.34□□□□□ -1.71
GTF3C3-209ENST00000466862 HNRNPA0Q13151 305 aaKnown RBP4.34□□□□□ -1.71
GTF3C3-209ENST00000466862 SART3Q15020 963 aaKnown RBP4.34□□□□□ -1.71
GTF3C3-209ENST00000466862 BMT2Q1RMZ1 405 aa4.34□□□□□ -1.71
GTF3C3-209ENST00000466862 ATP13A4Q4VNC1 1196 aa4.34□□□□□ -1.71
GTF3C3-209ENST00000466862 PDCD4Q53EL6 469 aaKnown RBP4.34□□□□□ -1.71
GTF3C3-209ENST00000466862 CT83Q5H943 113 aa4.34□□□□□ -1.71
GTF3C3-209ENST00000466862 TRMT2AQ8IZ69 625 aaKnown RBP4.34□□□□□ -1.71
GTF3C3-209ENST00000466862 RNF169Q8NCN4 708 aa4.34□□□□□ -1.71
GTF3C3-209ENST00000466862 MDM1Q8TC05 714 aa4.34□□□□□ -1.71
GTF3C3-209ENST00000466862 LEO1Q8WVC0 666 aaPredicted RBP4.34□□□□□ -1.71
GTF3C3-209ENST00000466862 LINC00476Q8WZB0 136 aa4.34□□□□□ -1.71
GTF3C3-209ENST00000466862 CDC5LQ99459 802 aaKnown RBP4.34□□□□□ -1.71
GTF3C3-209ENST00000466862 EPC1Q9H2F5 836 aa4.34□□□□□ -1.71
GTF3C3-209ENST00000466862 ANKFY1Q9P2R3 1169 aa4.34□□□□□ -1.71
GTF3C3-209ENST00000466862 APOBEC2Q9Y235 224 aaKnown RBP4.34□□□□□ -1.71
GTF3C3-209ENST00000466862 TNFRSF18Q9Y5U5 241 aa4.34□□□□□ -1.71
GTF3C3-209ENST00000466862 ATRNL1Q5VV63 1379 aa4.34□□□□□ -1.71
GTF3C3-209ENST00000466862 TBKBP1A7MCY6 615 aa4.33□□□□□ -1.72
GTF3C3-209ENST00000466862 GASTP01350 101 aa4.33□□□□□ -1.72
GTF3C3-209ENST00000466862 HSP90B1P14625 803 aaKnown RBP4.33□□□□□ -1.72
GTF3C3-209ENST00000466862 ENPP1P22413 925 aa4.33□□□□□ -1.72
GTF3C3-209ENST00000466862 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.33□□□□□ -1.72
GTF3C3-209ENST00000466862 SLC35B2Q8TB61 432 aa4.33□□□□□ -1.72
GTF3C3-209ENST00000466862 EAF2Q96CJ1 260 aaPredicted RBP4.33□□□□□ -1.72
GTF3C3-209ENST00000466862 ZNF764Q96H86 408 aaPredicted RBP4.33□□□□□ -1.72
GTF3C3-209ENST00000466862 ORAI2Q96SN7 254 aa4.33□□□□□ -1.72
GTF3C3-209ENST00000466862 WDR11Q9BZH6 1224 aa4.33□□□□□ -1.72
GTF3C3-209ENST00000466862 PJA2O43164 708 aa4.32□□□□□ -1.72
GTF3C3-209ENST00000466862 PPFIA2O75334 1257 aa4.32□□□□□ -1.72
GTF3C3-209ENST00000466862 MYCLP1P12525 358 aaPredicted RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms